| Literature DB >> 24764964 |
Augusto Rivera1, Luz Stella Nerio1, Michael Bolte2.
Abstract
In the title compound, C19H24N2O2, a di-Mannich base derived from 2-methyl-phenol and 1,3,6,8-tetra-aza-tri-cyclo-[4.4.1.1(3,8)]dodecane, the imidazolidine ring adopts a twist conformation, with a twist about the ring N-C bond [C-N-C-C torsion angle = -44.34 (14)°]. The two 2-hy-droxy-3-methyl-benzyl groups are located in trans positions with respect to the imidazolidine fragment. The structure displays two intra-molecular O-H⋯N hydrogen bonds, which each form an S(6) ring motif. In the crystal, the mol-ecules are linked by weak C-H⋯O inter-actions with a bifurcated acceptor, forming a three-dimensional network.Entities:
Year: 2014 PMID: 24764964 PMCID: PMC3998388 DOI: 10.1107/S1600536814002128
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H24N2O2 | |
| Melting point = 403–404 K | |
| Monoclinic, | Mo |
| Cell parameters from 17856 reflections | |
| θ = 3.4–26.3° | |
| µ = 0.08 mm−1 | |
| β = 107.940 (7)° | |
| Needle, brown | |
| 0.33 × 0.13 × 0.12 mm | |
| Stoe IPDS II two-circle diffractometer | 3207 independent reflections |
| Radiation source: Genix 3D IµS microfocus X-ray source | 2803 reflections with |
| Genix 3D multilayer optics monochromator | |
| ω scans | θmax = 25.9°, θmin = 3.4° |
| Absorption correction: multi-scan ( | |
| 16285 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 3207 reflections | Δρmax = 0.20 e Å−3 |
| 219 parameters | Δρmin = −0.17 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: difference Fourier map | Extinction coefficient: 0.017 (3) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.52432 (9) | 0.10588 (7) | 0.59144 (11) | 0.0354 (3) | |
| H1 | 0.460 (2) | 0.1024 (17) | 0.519 (2) | 0.067 (7)* | |
| O2 | −0.00181 (8) | 0.17557 (8) | 0.53718 (10) | 0.0326 (3) | |
| H2 | 0.047 (2) | 0.1533 (18) | 0.485 (2) | 0.070 (7)* | |
| N1 | 0.32247 (9) | 0.16347 (9) | 0.42350 (11) | 0.0268 (3) | |
| N2 | 0.16437 (9) | 0.10080 (9) | 0.46722 (12) | 0.0290 (3) | |
| C1 | 0.25284 (12) | 0.17521 (11) | 0.51349 (15) | 0.0317 (3) | |
| H1A | 0.2207 | 0.2423 | 0.5046 | 0.038* | |
| H1B | 0.2969 | 0.1639 | 0.6109 | 0.038* | |
| C2 | 0.24302 (12) | 0.13405 (12) | 0.29153 (14) | 0.0344 (3) | |
| H2A | 0.2812 | 0.1047 | 0.2295 | 0.041* | |
| H2B | 0.1970 | 0.1904 | 0.2447 | 0.041* | |
| C3 | 0.17414 (13) | 0.05850 (13) | 0.33757 (15) | 0.0382 (4) | |
| H3A | 0.1000 | 0.0505 | 0.2682 | 0.046* | |
| H3B | 0.2122 | −0.0062 | 0.3542 | 0.046* | |
| C4 | 0.38508 (12) | 0.25297 (11) | 0.41628 (15) | 0.0306 (3) | |
| H4A | 0.3329 | 0.3089 | 0.3864 | 0.037* | |
| H4B | 0.4247 | 0.2440 | 0.3471 | 0.037* | |
| C5 | 0.16693 (12) | 0.02503 (11) | 0.57129 (15) | 0.0314 (3) | |
| H5A | 0.2444 | 0.0013 | 0.6112 | 0.038* | |
| H5B | 0.1208 | −0.0316 | 0.5255 | 0.038* | |
| C11 | 0.46819 (11) | 0.27610 (10) | 0.55457 (15) | 0.0282 (3) | |
| C12 | 0.53386 (11) | 0.20167 (10) | 0.63485 (15) | 0.0278 (3) | |
| C13 | 0.61017 (11) | 0.22221 (11) | 0.76376 (15) | 0.0311 (3) | |
| C14 | 0.62035 (12) | 0.31874 (12) | 0.80964 (17) | 0.0381 (4) | |
| H14 | 0.6729 | 0.3341 | 0.8962 | 0.046* | |
| C15 | 0.55590 (13) | 0.39346 (12) | 0.73245 (19) | 0.0424 (4) | |
| H15 | 0.5636 | 0.4591 | 0.7662 | 0.051* | |
| C16 | 0.48010 (12) | 0.37156 (11) | 0.60557 (17) | 0.0356 (3) | |
| H16 | 0.4356 | 0.4227 | 0.5526 | 0.043* | |
| C17 | 0.67528 (13) | 0.14002 (13) | 0.85113 (17) | 0.0411 (4) | |
| H17A | 0.7204 | 0.1664 | 0.9402 | 0.062* | |
| H17B | 0.7240 | 0.1097 | 0.8042 | 0.062* | |
| H17C | 0.6237 | 0.0904 | 0.8659 | 0.062* | |
| C21 | 0.12514 (11) | 0.06119 (10) | 0.68633 (14) | 0.0272 (3) | |
| C22 | 0.04162 (11) | 0.13237 (10) | 0.66313 (13) | 0.0261 (3) | |
| C23 | −0.00336 (12) | 0.16134 (11) | 0.76666 (15) | 0.0296 (3) | |
| C24 | 0.03670 (13) | 0.11608 (11) | 0.89454 (15) | 0.0335 (3) | |
| H24 | 0.0066 | 0.1339 | 0.9658 | 0.040* | |
| C25 | 0.11964 (14) | 0.04555 (11) | 0.92013 (15) | 0.0368 (4) | |
| H25 | 0.1461 | 0.0155 | 1.0084 | 0.044* | |
| C26 | 0.16402 (12) | 0.01877 (11) | 0.81681 (15) | 0.0330 (3) | |
| H26 | 0.2216 | −0.0291 | 0.8352 | 0.040* | |
| C27 | −0.09425 (13) | 0.23731 (12) | 0.73391 (17) | 0.0391 (4) | |
| H27A | −0.1177 | 0.2491 | 0.8156 | 0.059* | |
| H27B | −0.1578 | 0.2136 | 0.6584 | 0.059* | |
| H27C | −0.0665 | 0.2988 | 0.7063 | 0.059* |
| O1 | 0.0403 (6) | 0.0253 (5) | 0.0376 (6) | 0.0031 (4) | 0.0076 (5) | −0.0018 (4) |
| O2 | 0.0313 (5) | 0.0376 (6) | 0.0286 (5) | 0.0036 (4) | 0.0090 (4) | 0.0072 (4) |
| N1 | 0.0281 (6) | 0.0290 (6) | 0.0252 (6) | −0.0013 (5) | 0.0109 (5) | −0.0026 (4) |
| N2 | 0.0299 (6) | 0.0310 (6) | 0.0269 (6) | −0.0058 (5) | 0.0097 (5) | −0.0056 (5) |
| C1 | 0.0318 (7) | 0.0343 (8) | 0.0332 (7) | −0.0078 (6) | 0.0163 (6) | −0.0096 (6) |
| C2 | 0.0354 (7) | 0.0427 (9) | 0.0262 (7) | −0.0025 (6) | 0.0111 (6) | −0.0060 (6) |
| C3 | 0.0414 (8) | 0.0431 (9) | 0.0312 (7) | −0.0104 (7) | 0.0128 (6) | −0.0131 (6) |
| C4 | 0.0300 (7) | 0.0311 (7) | 0.0329 (7) | 0.0001 (6) | 0.0130 (6) | 0.0059 (6) |
| C5 | 0.0308 (7) | 0.0277 (7) | 0.0350 (8) | −0.0012 (6) | 0.0090 (6) | −0.0020 (6) |
| C11 | 0.0241 (6) | 0.0285 (7) | 0.0354 (7) | −0.0028 (5) | 0.0141 (6) | 0.0021 (6) |
| C12 | 0.0257 (6) | 0.0264 (7) | 0.0345 (7) | −0.0014 (5) | 0.0142 (6) | 0.0003 (6) |
| C13 | 0.0252 (7) | 0.0340 (8) | 0.0361 (7) | −0.0024 (6) | 0.0126 (6) | 0.0007 (6) |
| C14 | 0.0295 (7) | 0.0380 (9) | 0.0443 (9) | −0.0083 (6) | 0.0076 (6) | −0.0062 (7) |
| C15 | 0.0374 (8) | 0.0278 (8) | 0.0600 (10) | −0.0073 (6) | 0.0119 (7) | −0.0095 (7) |
| C16 | 0.0311 (7) | 0.0254 (7) | 0.0507 (9) | −0.0015 (6) | 0.0130 (6) | 0.0026 (6) |
| C17 | 0.0380 (8) | 0.0424 (9) | 0.0385 (8) | 0.0014 (7) | 0.0055 (7) | 0.0039 (7) |
| C21 | 0.0269 (6) | 0.0237 (7) | 0.0297 (7) | −0.0060 (5) | 0.0068 (5) | −0.0015 (5) |
| C22 | 0.0260 (6) | 0.0247 (7) | 0.0261 (6) | −0.0073 (5) | 0.0057 (5) | 0.0007 (5) |
| C23 | 0.0292 (7) | 0.0281 (7) | 0.0316 (7) | −0.0076 (5) | 0.0095 (6) | −0.0041 (5) |
| C24 | 0.0418 (8) | 0.0325 (8) | 0.0280 (7) | −0.0102 (6) | 0.0137 (6) | −0.0047 (6) |
| C25 | 0.0471 (9) | 0.0335 (8) | 0.0259 (7) | −0.0064 (7) | 0.0053 (6) | 0.0045 (6) |
| C26 | 0.0333 (7) | 0.0275 (7) | 0.0333 (7) | −0.0018 (6) | 0.0031 (6) | 0.0028 (6) |
| C27 | 0.0373 (8) | 0.0414 (9) | 0.0400 (8) | 0.0013 (7) | 0.0140 (7) | −0.0039 (7) |
| O1—C12 | 1.3673 (17) | C12—C13 | 1.398 (2) |
| O1—H1 | 0.91 (2) | C13—C14 | 1.384 (2) |
| O2—C22 | 1.3643 (16) | C13—C17 | 1.505 (2) |
| O2—H2 | 0.98 (2) | C14—C15 | 1.384 (2) |
| N1—C1 | 1.4622 (17) | C14—H14 | 0.9500 |
| N1—C4 | 1.4639 (18) | C15—C16 | 1.384 (2) |
| N1—C2 | 1.4650 (18) | C15—H15 | 0.9500 |
| N2—C5 | 1.4714 (19) | C16—H16 | 0.9500 |
| N2—C1 | 1.4719 (17) | C17—H17A | 0.9800 |
| N2—C3 | 1.4813 (18) | C17—H17B | 0.9800 |
| C1—H1A | 0.9900 | C17—H17C | 0.9800 |
| C1—H1B | 0.9900 | C21—C26 | 1.393 (2) |
| C2—C3 | 1.510 (2) | C21—C22 | 1.396 (2) |
| C2—H2A | 0.9900 | C22—C23 | 1.401 (2) |
| C2—H2B | 0.9900 | C23—C24 | 1.389 (2) |
| C3—H3A | 0.9900 | C23—C27 | 1.502 (2) |
| C3—H3B | 0.9900 | C24—C25 | 1.383 (2) |
| C4—C11 | 1.509 (2) | C24—H24 | 0.9500 |
| C4—H4A | 0.9900 | C25—C26 | 1.386 (2) |
| C4—H4B | 0.9900 | C25—H25 | 0.9500 |
| C5—C21 | 1.509 (2) | C26—H26 | 0.9500 |
| C5—H5A | 0.9900 | C27—H27A | 0.9800 |
| C5—H5B | 0.9900 | C27—H27B | 0.9800 |
| C11—C16 | 1.388 (2) | C27—H27C | 0.9800 |
| C11—C12 | 1.400 (2) | ||
| C12—O1—H1 | 106.2 (15) | C13—C12—C11 | 121.23 (13) |
| C22—O2—H2 | 103.8 (14) | C14—C13—C12 | 118.17 (14) |
| C1—N1—C4 | 112.31 (11) | C14—C13—C17 | 121.68 (14) |
| C1—N1—C2 | 103.44 (11) | C12—C13—C17 | 120.11 (14) |
| C4—N1—C2 | 114.07 (11) | C13—C14—C15 | 121.64 (15) |
| C5—N2—C1 | 113.75 (11) | C13—C14—H14 | 119.2 |
| C5—N2—C3 | 112.55 (12) | C15—C14—H14 | 119.2 |
| C1—N2—C3 | 106.78 (11) | C16—C15—C14 | 119.36 (15) |
| N1—C1—N2 | 105.53 (11) | C16—C15—H15 | 120.3 |
| N1—C1—H1A | 110.6 | C14—C15—H15 | 120.3 |
| N2—C1—H1A | 110.6 | C15—C16—C11 | 121.00 (14) |
| N1—C1—H1B | 110.6 | C15—C16—H16 | 119.5 |
| N2—C1—H1B | 110.6 | C11—C16—H16 | 119.5 |
| H1A—C1—H1B | 108.8 | C13—C17—H17A | 109.5 |
| N1—C2—C3 | 101.34 (11) | C13—C17—H17B | 109.5 |
| N1—C2—H2A | 111.5 | H17A—C17—H17B | 109.5 |
| C3—C2—H2A | 111.5 | C13—C17—H17C | 109.5 |
| N1—C2—H2B | 111.5 | H17A—C17—H17C | 109.5 |
| C3—C2—H2B | 111.5 | H17B—C17—H17C | 109.5 |
| H2A—C2—H2B | 109.3 | C26—C21—C22 | 118.27 (13) |
| N2—C3—C2 | 103.21 (12) | C26—C21—C5 | 120.23 (13) |
| N2—C3—H3A | 111.1 | C22—C21—C5 | 121.36 (12) |
| C2—C3—H3A | 111.1 | O2—C22—C21 | 121.39 (12) |
| N2—C3—H3B | 111.1 | O2—C22—C23 | 116.77 (12) |
| C2—C3—H3B | 111.1 | C21—C22—C23 | 121.83 (12) |
| H3A—C3—H3B | 109.1 | C24—C23—C22 | 117.96 (14) |
| N1—C4—C11 | 110.89 (11) | C24—C23—C27 | 123.03 (13) |
| N1—C4—H4A | 109.5 | C22—C23—C27 | 118.99 (13) |
| C11—C4—H4A | 109.5 | C25—C24—C23 | 121.28 (14) |
| N1—C4—H4B | 109.5 | C25—C24—H24 | 119.4 |
| C11—C4—H4B | 109.5 | C23—C24—H24 | 119.4 |
| H4A—C4—H4B | 108.1 | C24—C25—C26 | 119.87 (13) |
| N2—C5—C21 | 113.46 (12) | C24—C25—H25 | 120.1 |
| N2—C5—H5A | 108.9 | C26—C25—H25 | 120.1 |
| C21—C5—H5A | 108.9 | C25—C26—C21 | 120.79 (14) |
| N2—C5—H5B | 108.9 | C25—C26—H26 | 119.6 |
| C21—C5—H5B | 108.9 | C21—C26—H26 | 119.6 |
| H5A—C5—H5B | 107.7 | C23—C27—H27A | 109.5 |
| C16—C11—C12 | 118.60 (13) | C23—C27—H27B | 109.5 |
| C16—C11—C4 | 120.58 (13) | H27A—C27—H27B | 109.5 |
| C12—C11—C4 | 120.82 (13) | C23—C27—H27C | 109.5 |
| O1—C12—C13 | 117.43 (13) | H27A—C27—H27C | 109.5 |
| O1—C12—C11 | 121.33 (13) | H27B—C27—H27C | 109.5 |
| C4—N1—C1—N2 | 156.96 (11) | C12—C13—C14—C15 | 1.2 (2) |
| C2—N1—C1—N2 | 33.51 (15) | C17—C13—C14—C15 | −176.34 (15) |
| C5—N2—C1—N1 | 115.88 (13) | C13—C14—C15—C16 | −0.7 (2) |
| C3—N2—C1—N1 | −8.89 (15) | C14—C15—C16—C11 | −0.3 (2) |
| C1—N1—C2—C3 | −44.34 (14) | C12—C11—C16—C15 | 0.6 (2) |
| C4—N1—C2—C3 | −166.63 (12) | C4—C11—C16—C15 | 179.84 (14) |
| C5—N2—C3—C2 | −143.72 (12) | N2—C5—C21—C26 | −152.12 (12) |
| C1—N2—C3—C2 | −18.22 (16) | N2—C5—C21—C22 | 32.45 (18) |
| N1—C2—C3—N2 | 38.30 (15) | C26—C21—C22—O2 | −178.73 (12) |
| C1—N1—C4—C11 | 65.00 (15) | C5—C21—C22—O2 | −3.2 (2) |
| C2—N1—C4—C11 | −177.72 (11) | C26—C21—C22—C23 | −0.2 (2) |
| C1—N2—C5—C21 | 74.79 (14) | C5—C21—C22—C23 | 175.35 (12) |
| C3—N2—C5—C21 | −163.60 (11) | O2—C22—C23—C24 | 177.86 (12) |
| N1—C4—C11—C16 | −135.44 (13) | C21—C22—C23—C24 | −0.8 (2) |
| N1—C4—C11—C12 | 43.76 (17) | O2—C22—C23—C27 | −0.48 (19) |
| C16—C11—C12—O1 | 178.67 (13) | C21—C22—C23—C27 | −179.12 (13) |
| C4—C11—C12—O1 | −0.5 (2) | C22—C23—C24—C25 | 0.9 (2) |
| C16—C11—C12—C13 | −0.1 (2) | C27—C23—C24—C25 | 179.21 (14) |
| C4—C11—C12—C13 | −179.28 (12) | C23—C24—C25—C26 | −0.2 (2) |
| O1—C12—C13—C14 | −179.60 (13) | C24—C25—C26—C21 | −0.8 (2) |
| C11—C12—C13—C14 | −0.8 (2) | C22—C21—C26—C25 | 1.0 (2) |
| O1—C12—C13—C17 | −2.0 (2) | C5—C21—C26—C25 | −174.60 (13) |
| C11—C12—C13—C17 | 176.75 (13) |
| H··· | ||||
| O1—H1···N1 | 0.91 (2) | 1.90 (2) | 2.7115 (16) | 146 (2) |
| O2—H2···N2 | 0.98 (2) | 1.70 (2) | 2.6202 (16) | 155 (2) |
| C5—H5 | 0.99 | 2.43 | 3.4012 (18) | 167 |
| C27—H27 | 0.98 | 2.50 | 3.1789 (19) | 126 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1⋯N1 | 0.91 (2) | 1.90 (2) | 2.7115 (16) | 146 (2) |
| O2—H2⋯N2 | 0.98 (2) | 1.70 (2) | 2.6202 (16) | 155 (2) |
| C5—H5 | 0.99 | 2.43 | 3.4012 (18) | 167 |
| C27—H27 | 0.98 | 2.50 | 3.1789 (19) | 126 |
Symmetry codes: (i) ; (ii) .