Literature DB >> 24046710

4,4'-Di-tert-butyl-2,2'-[imidazolidine-1,3-diylbis(methyl-ene)]diphenol.

Augusto Rivera1, Luz Stella Nerio, Michael Bolte.   

Abstract

In the title compound, C25H36N2O2, the two tert-butyl-substituted benzene rings are inclined at an angle of 53.5 (3)° to one another. The imidazolidine ring has an envelope conformation with with one of the C atoms of the ethylene fragment as the flap. The structure displays two intra-molecular O-H⋯N hydrogen bonds that generate S(6) ring motifs. The crystal studied was a non-merohedral twin with a fractional contribution of 0.281(6) for the minor domain.

Entities:  

Year:  2013        PMID: 24046710      PMCID: PMC3770425          DOI: 10.1107/S1600536813017157

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Rivera et al. (2011 ▶, 2012a ▶,b ▶); Rivera, Nerio, Ríos-Motta, Fejfarová et al. (2012 ▶). For the use of the 2,2′-[imidazolidine-1,3-diylbis(methyl­ene)]diphenol system as a ligand in the synthesis of a variety of coordination compounds, see: Kober et al. (2012 ▶); Xu et al. (2007 ▶); Zhang et al. (2009 ▶). For the original synthesis of the title compound, see: Rivera et al. (1993 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C25H36N2O2 M = 396.56 Monoclinic, a = 21.0879 (16) Å b = 6.2110 (4) Å c = 17.9086 (16) Å β = 109.168 (6)° V = 2215.6 (3) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 173 K 0.24 × 0.22 × 0.19 mm

Data collection

Stoe IPDS II two-circle diffractometer 22835 measured reflections 3909 independent reflections 3131 reflections with I > 2σ(I) R int = 0.101

Refinement

R[F 2 > 2σ(F 2)] = 0.119 wR(F 2) = 0.324 S = 1.13 3909 reflections 272 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.42 e Å−3 Δρmin = −0.39 e Å−3 Data collection: X-AREA (Stoe & Cie, 2001 ▶); cell refinement: X-AREA; data reduction: XRED-32 (Stoe & Cie, 2001 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813017157/sj5337sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813017157/sj5337Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813017157/sj5337Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C25H36N2O2F(000) = 864
Mr = 396.56Dx = 1.189 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 21.0879 (16) ÅCell parameters from 20905 reflections
b = 6.2110 (4) Åθ = 2.1–26.0°
c = 17.9086 (16) ŵ = 0.08 mm1
β = 109.168 (6)°T = 173 K
V = 2215.6 (3) Å3Block, colourless
Z = 40.24 × 0.22 × 0.19 mm
Stoe IPDS II two-circle diffractometerRint = 0.101
Radiation source: Genix 3D IµS microfocus X-ray sourceθmax = 25.0°, θmin = 2.1°
ω scansh = −25→24
22835 measured reflectionsk = −7→7
3909 independent reflectionsl = −18→21
3131 reflections with I > 2σ(I)
Refinement on F2Hydrogen site location: mixed
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.119w = 1/[σ2(Fo2) + (0.0705P)2 + 10.9502P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.324(Δ/σ)max < 0.001
S = 1.13Δρmax = 0.42 e Å3
3909 reflectionsΔρmin = −0.39 e Å3
272 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 restraintsExtinction coefficient: 0.037 (4)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refined as a 2-component twin.
xyzUiso*/Ueq
O10.4712 (2)0.0117 (8)0.5876 (3)0.0455 (12)
H10.500 (5)0.122 (16)0.624 (6)0.09 (3)*
O20.6663 (2)0.9590 (8)0.7246 (3)0.0455 (12)
H20.635 (4)0.845 (13)0.716 (5)0.06 (2)*
N10.5256 (3)0.3720 (9)0.6606 (3)0.0385 (13)
N20.6261 (3)0.5545 (8)0.7268 (3)0.0368 (13)
C10.5734 (3)0.4179 (13)0.7397 (4)0.0489 (18)
H1A0.59290.28270.76690.059*
H1B0.55080.49450.77240.059*
C20.5537 (3)0.4692 (12)0.6021 (4)0.0433 (16)
H2A0.53460.61390.58540.052*
H2B0.54530.37650.55490.052*
C30.6280 (3)0.4820 (11)0.6489 (4)0.0369 (14)
H3A0.65010.33980.65250.044*
H3B0.65130.58750.62560.044*
C40.4565 (3)0.4390 (11)0.6528 (4)0.0419 (16)
H4A0.45240.59640.64370.050*
H4B0.44830.40890.70310.050*
C50.6896 (3)0.5301 (11)0.7933 (4)0.0394 (15)
H5A0.70460.37850.79600.047*
H5B0.68130.56390.84340.047*
C110.4026 (3)0.3260 (10)0.5857 (4)0.0364 (14)
C120.4124 (3)0.1211 (11)0.5592 (4)0.0407 (15)
C130.3586 (4)0.0247 (11)0.5019 (4)0.0492 (18)
H130.3648−0.11130.48100.059*
C140.2970 (4)0.1210 (11)0.4750 (4)0.0449 (16)
H140.26170.05080.43540.054*
C150.2846 (3)0.3197 (10)0.5040 (4)0.0399 (15)
C160.3396 (3)0.4209 (11)0.5576 (4)0.0421 (16)
H160.33390.56080.57580.050*
C170.2157 (3)0.4268 (12)0.4738 (4)0.0420 (16)
C180.2078 (4)0.5451 (13)0.3962 (4)0.0518 (19)
H18A0.21410.44310.35740.078*
H18B0.24150.65960.40570.078*
H18C0.16280.60810.37580.078*
C190.2058 (4)0.5876 (14)0.5326 (4)0.055 (2)
H19A0.21040.51440.58250.082*
H19B0.16090.65100.51140.082*
H19C0.23960.70150.54170.082*
C200.1589 (4)0.2555 (15)0.4574 (6)0.066 (2)
H20A0.16290.17770.50630.099*
H20B0.16300.15370.41740.099*
H20C0.11520.32720.43810.099*
C210.7443 (3)0.6742 (10)0.7855 (4)0.0363 (14)
C220.7299 (3)0.8793 (10)0.7516 (4)0.0403 (15)
C230.7822 (3)1.0074 (11)0.7463 (4)0.0434 (16)
H230.77311.14530.72220.052*
C240.8475 (3)0.9344 (11)0.7760 (4)0.0434 (16)
H240.88251.02410.77150.052*
C250.8639 (3)0.7346 (11)0.8122 (4)0.0422 (16)
C260.8101 (3)0.6077 (10)0.8153 (4)0.0366 (14)
H260.81940.46930.83900.044*
C270.9369 (3)0.6602 (12)0.8458 (5)0.0506 (18)
C280.9627 (4)0.613 (2)0.7759 (6)0.090 (4)
H28A0.95880.74330.74380.135*
H28B0.93590.49750.74320.135*
H28C1.00990.56870.79640.135*
C290.9436 (4)0.4555 (14)0.8947 (6)0.069 (2)
H29A0.91590.34170.86190.103*
H29B0.92860.48360.94010.103*
H29C0.99070.40940.91340.103*
C300.9809 (4)0.8335 (14)0.8977 (6)0.071 (3)
H30A0.97680.96690.86720.106*
H30B1.02780.78580.91560.106*
H30C0.96650.85950.94360.106*
U11U22U33U12U13U23
O10.044 (3)0.040 (3)0.055 (3)0.004 (2)0.020 (2)−0.007 (2)
O20.039 (3)0.036 (3)0.055 (3)0.004 (2)0.007 (2)0.006 (2)
N10.034 (3)0.046 (3)0.039 (3)−0.001 (2)0.017 (2)0.001 (2)
N20.033 (3)0.039 (3)0.037 (3)−0.003 (2)0.011 (2)−0.003 (2)
C10.039 (4)0.055 (4)0.053 (4)−0.012 (3)0.014 (3)0.000 (4)
C20.039 (4)0.047 (4)0.041 (4)0.003 (3)0.010 (3)0.001 (3)
C30.039 (3)0.038 (3)0.033 (3)−0.004 (3)0.011 (3)−0.004 (3)
C40.036 (3)0.042 (4)0.051 (4)−0.001 (3)0.020 (3)−0.008 (3)
C50.036 (3)0.044 (4)0.036 (3)0.001 (3)0.009 (3)0.002 (3)
C110.037 (3)0.032 (3)0.041 (4)−0.004 (3)0.015 (3)−0.003 (3)
C120.047 (4)0.039 (4)0.039 (3)0.001 (3)0.017 (3)0.005 (3)
C130.060 (4)0.032 (3)0.052 (4)−0.003 (3)0.013 (4)−0.005 (3)
C140.051 (4)0.041 (4)0.042 (4)−0.008 (3)0.014 (3)−0.006 (3)
C150.040 (3)0.038 (3)0.042 (4)−0.004 (3)0.013 (3)0.003 (3)
C160.038 (3)0.036 (3)0.050 (4)−0.001 (3)0.012 (3)−0.001 (3)
C170.035 (3)0.051 (4)0.041 (4)−0.001 (3)0.014 (3)0.006 (3)
C180.048 (4)0.065 (5)0.039 (4)0.001 (4)0.010 (3)0.005 (3)
C190.048 (4)0.068 (5)0.046 (4)0.013 (4)0.012 (3)0.000 (4)
C200.040 (4)0.072 (5)0.081 (6)−0.012 (4)0.011 (4)0.006 (5)
C210.041 (3)0.035 (3)0.030 (3)−0.004 (3)0.009 (3)−0.003 (3)
C220.042 (4)0.035 (3)0.044 (4)0.000 (3)0.013 (3)−0.003 (3)
C230.055 (4)0.036 (3)0.037 (3)−0.007 (3)0.013 (3)0.005 (3)
C240.042 (4)0.047 (4)0.043 (4)−0.013 (3)0.016 (3)−0.003 (3)
C250.042 (4)0.042 (4)0.040 (4)−0.005 (3)0.010 (3)−0.006 (3)
C260.036 (3)0.036 (3)0.035 (3)0.001 (3)0.008 (3)−0.003 (3)
C270.040 (4)0.055 (4)0.052 (4)−0.003 (3)0.010 (3)−0.007 (4)
C280.049 (5)0.135 (10)0.089 (7)0.009 (6)0.027 (5)−0.027 (7)
C290.045 (4)0.056 (5)0.094 (7)0.002 (4)0.007 (4)0.000 (5)
C300.055 (5)0.055 (5)0.085 (6)−0.010 (4)−0.001 (4)−0.011 (5)
O1—C121.357 (8)C17—C181.533 (10)
O1—H11.00 (10)C17—C201.556 (10)
O2—C221.360 (8)C18—H18A0.9800
O2—H20.95 (8)C18—H18B0.9800
N1—C11.473 (9)C18—H18C0.9800
N1—C41.478 (8)C19—H19A0.9800
N1—C21.490 (9)C19—H19B0.9800
N2—C11.476 (8)C19—H19C0.9800
N2—C51.479 (8)C20—H20A0.9800
N2—C31.479 (8)C20—H20B0.9800
C1—H1A0.9900C20—H20C0.9800
C1—H1B0.9900C21—C261.377 (9)
C2—C31.517 (9)C21—C221.401 (9)
C2—H2A0.9900C22—C231.389 (9)
C2—H2B0.9900C23—C241.378 (10)
C3—H3A0.9900C23—H230.9500
C3—H3B0.9900C24—C251.391 (10)
C4—C111.526 (9)C24—H240.9500
C4—H4A0.9900C25—C261.397 (9)
C4—H4B0.9900C25—C271.529 (9)
C5—C211.503 (9)C26—H260.9500
C5—H5A0.9900C27—C301.522 (10)
C5—H5B0.9900C27—C291.523 (12)
C11—C161.388 (9)C27—C281.549 (12)
C11—C121.397 (9)C28—H28A0.9800
C12—C131.392 (10)C28—H28B0.9800
C13—C141.365 (10)C28—H28C0.9800
C13—H130.9500C29—H29A0.9800
C14—C151.397 (9)C29—H29B0.9800
C14—H140.9500C29—H29C0.9800
C15—C161.390 (9)C30—H30A0.9800
C15—C171.526 (9)C30—H30B0.9800
C16—H160.9500C30—H30C0.9800
C17—C191.514 (10)
C12—O1—H1101 (5)C18—C17—C20108.0 (6)
C22—O2—H2110 (5)C17—C18—H18A109.5
C1—N1—C4112.3 (5)C17—C18—H18B109.5
C1—N1—C2107.0 (5)H18A—C18—H18B109.5
C4—N1—C2115.3 (5)C17—C18—H18C109.5
C1—N2—C5110.1 (5)H18A—C18—H18C109.5
C1—N2—C3103.2 (5)H18B—C18—H18C109.5
C5—N2—C3115.6 (5)C17—C19—H19A109.5
N1—C1—N2105.8 (5)C17—C19—H19B109.5
N1—C1—H1A110.6H19A—C19—H19B109.5
N2—C1—H1A110.6C17—C19—H19C109.5
N1—C1—H1B110.6H19A—C19—H19C109.5
N2—C1—H1B110.6H19B—C19—H19C109.5
H1A—C1—H1B108.7C17—C20—H20A109.5
N1—C2—C3102.2 (5)C17—C20—H20B109.5
N1—C2—H2A111.3H20A—C20—H20B109.5
C3—C2—H2A111.3C17—C20—H20C109.5
N1—C2—H2B111.3H20A—C20—H20C109.5
C3—C2—H2B111.3H20B—C20—H20C109.5
H2A—C2—H2B109.2C26—C21—C22119.3 (6)
N2—C3—C2101.1 (5)C26—C21—C5119.5 (6)
N2—C3—H3A111.5C22—C21—C5121.2 (6)
C2—C3—H3A111.5O2—C22—C23118.7 (6)
N2—C3—H3B111.5O2—C22—C21122.2 (6)
C2—C3—H3B111.5C23—C22—C21119.1 (6)
H3A—C3—H3B109.4C24—C23—C22120.0 (6)
N1—C4—C11113.6 (5)C24—C23—H23120.0
N1—C4—H4A108.8C22—C23—H23120.0
C11—C4—H4A108.8C23—C24—C25122.5 (6)
N1—C4—H4B108.8C23—C24—H24118.8
C11—C4—H4B108.8C25—C24—H24118.8
H4A—C4—H4B107.7C24—C25—C26116.2 (6)
N2—C5—C21112.5 (5)C24—C25—C27121.2 (6)
N2—C5—H5A109.1C26—C25—C27122.6 (6)
C21—C5—H5A109.1C21—C26—C25122.9 (6)
N2—C5—H5B109.1C21—C26—H26118.6
C21—C5—H5B109.1C25—C26—H26118.6
H5A—C5—H5B107.8C30—C27—C29108.5 (7)
C16—C11—C12119.6 (6)C30—C27—C25111.1 (6)
C16—C11—C4117.8 (6)C29—C27—C25111.7 (6)
C12—C11—C4122.1 (6)C30—C27—C28108.7 (7)
O1—C12—C13119.0 (6)C29—C27—C28108.4 (8)
O1—C12—C11123.2 (6)C25—C27—C28108.4 (6)
C13—C12—C11117.8 (6)C27—C28—H28A109.5
C14—C13—C12121.5 (7)C27—C28—H28B109.5
C14—C13—H13119.2H28A—C28—H28B109.5
C12—C13—H13119.2C27—C28—H28C109.5
C13—C14—C15121.9 (7)H28A—C28—H28C109.5
C13—C14—H14119.0H28B—C28—H28C109.5
C15—C14—H14119.0C27—C29—H29A109.5
C16—C15—C14116.1 (6)C27—C29—H29B109.5
C16—C15—C17121.9 (6)H29A—C29—H29B109.5
C14—C15—C17121.8 (6)C27—C29—H29C109.5
C11—C16—C15122.8 (6)H29A—C29—H29C109.5
C11—C16—H16118.6H29B—C29—H29C109.5
C15—C16—H16118.6C27—C30—H30A109.5
C19—C17—C15112.0 (6)C27—C30—H30B109.5
C19—C17—C18108.4 (6)H30A—C30—H30B109.5
C15—C17—C18109.7 (6)C27—C30—H30C109.5
C19—C17—C20108.0 (6)H30A—C30—H30C109.5
C15—C17—C20110.6 (6)H30B—C30—H30C109.5
C4—N1—C1—N2−123.4 (6)C16—C15—C17—C19−26.9 (9)
C2—N1—C1—N24.0 (7)C14—C15—C17—C19157.8 (7)
C5—N2—C1—N1−154.4 (5)C16—C15—C17—C1893.5 (8)
C3—N2—C1—N1−30.5 (7)C14—C15—C17—C18−81.8 (8)
C1—N1—C2—C323.1 (7)C16—C15—C17—C20−147.5 (7)
C4—N1—C2—C3148.8 (5)C14—C15—C17—C2037.2 (9)
C1—N2—C3—C244.4 (6)N2—C5—C21—C26−148.4 (6)
C5—N2—C3—C2164.6 (5)N2—C5—C21—C2234.6 (8)
N1—C2—C3—N2−41.3 (6)C26—C21—C22—O2−176.7 (6)
C1—N1—C4—C11−159.1 (6)C5—C21—C22—O20.3 (10)
C2—N1—C4—C1177.9 (7)C26—C21—C22—C232.4 (9)
C1—N2—C5—C21−177.0 (6)C5—C21—C22—C23179.4 (6)
C3—N2—C5—C2166.5 (7)O2—C22—C23—C24177.5 (6)
N1—C4—C11—C16−160.5 (6)C21—C22—C23—C24−1.6 (10)
N1—C4—C11—C1227.4 (9)C22—C23—C24—C25−0.4 (11)
C16—C11—C12—O1−175.5 (6)C23—C24—C25—C261.6 (10)
C4—C11—C12—O1−3.6 (10)C23—C24—C25—C27−178.9 (7)
C16—C11—C12—C133.2 (10)C22—C21—C26—C25−1.2 (10)
C4—C11—C12—C13175.2 (6)C5—C21—C26—C25−178.2 (6)
O1—C12—C13—C14175.6 (7)C24—C25—C26—C21−0.8 (10)
C11—C12—C13—C14−3.2 (11)C27—C25—C26—C21179.7 (6)
C12—C13—C14—C15−0.7 (11)C24—C25—C27—C3048.9 (10)
C13—C14—C15—C164.5 (10)C26—C25—C27—C30−131.5 (8)
C13—C14—C15—C17−180.0 (7)C24—C25—C27—C29170.2 (7)
C12—C11—C16—C150.7 (10)C26—C25—C27—C29−10.3 (10)
C4—C11—C16—C15−171.6 (6)C24—C25—C27—C28−70.4 (9)
C14—C15—C16—C11−4.4 (10)C26—C25—C27—C28109.1 (9)
C17—C15—C16—C11180.0 (6)
D—H···AD—HH···AD···AD—H···A
O1—H1···N11.00 (10)1.70 (10)2.655 (7)157 (8)
O2—H2···N20.95 (8)1.83 (8)2.656 (7)144 (7)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1⋯N11.00 (10)1.70 (10)2.655 (7)157 (8)
O2—H2⋯N20.95 (8)1.83 (8)2.656 (7)144 (7)
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2.  A short history of SHELX.

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3.  Synthesis, reactivity, and structural characterization of sodium and ytterbium complexes containing new imidazolidine-bridged bis(phenolato) ligands.

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4.  Synthesis of rare-earth metal amides bearing an imidazolidine-bridged bis(phenolato) ligand and their application in the polymerization of L-lactide.

Authors:  Zhongjian Zhang; Xiaoping Xu; Wenyi Li; Yingming Yao; Yong Zhang; Qi Shen; Yunjie Luo
Journal:  Inorg Chem       Date:  2009-07-06       Impact factor: 5.165

5.  2,2'-[Imidazolidine-1,3-diylbis(methyl-ene)]diphenol.

Authors:  Augusto Rivera; Luz Stella Nerio; Jaime Ríos-Motta; Karla Fejfarová; Michal Dušek
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-12-17

6.  4,4'-Dichloro-2,2'-[imidazolidine-1,3-diylbis(methylene)]diphenol.

Authors:  Augusto Rivera; John Sadat-Bernal; Jaime Ríos-Motta; Michaela Pojarová; Michal Dušek
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-09-14

7.  4,4'-Difluoro-2,2'-[imidazolidine-1,3-diylbis(methyl-ene)]diphenol.

Authors:  Augusto Rivera; Luz Stella Nerio; Jaime Ríos-Motta; Monika Kučeráková; Michal Dušek
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-09-29

8.  4,4'-Dimethyl-2,2'-[imidazolidine-1,3-diylbis(methyl-ene)]diphenol.

Authors:  Augusto Rivera; Luz Stella Nerio; Jaime Ríos-Motta; Monika Kučeraková; Michal Dušek
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-10-20
  8 in total
  3 in total

1.  Crystal structure of 1,1'-[imidazolidine-1,3-diylbis(methyl-ene)]bis-(naphthalen-2-ol).

Authors:  Augusto Rivera; Jicli José Rojas; Jaime Ríos-Motta; Michael Bolte
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-02-07

2.  6,6'-Dimethyl-2,2'-[imidazolidine-1,3-diyl-bis(methyl-ene)]diphenol.

Authors:  Augusto Rivera; Luz Stella Nerio; Michael Bolte
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-02-05

3.  Crystal structure of the di-Mannich base 4,4'-di-chloro-3,3',5,5'-tetra-methyl-2,2'-[imidazolidine-1,3-diylbis(methyl-ene)]diphenol.

Authors:  Augusto Rivera; Luz Stella Nerio; Michael Bolte
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-02-25
  3 in total

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