Literature DB >> 24034903

Solid state NMR and protein-protein interactions in membranes.

Yimin Miao1, Timothy A Cross.   

Abstract

Solid state NMR spectroscopy has evolved rapidly in recent years into an excellent tool for the characterization of membrane proteins and their complexes. In the past few years it has also become clear that the structure of membrane proteins, especially helical membrane proteins is determined, in part, by the membrane environment. Therefore, the modeling of this environment by a liquid crystalline lipid bilayer for solid state NMR has generated a unique tool for the characterization of native conformational states, local and global dynamics, and high-resolution structure for these proteins. Protein-protein interactions can also benefit from this solid state NMR capability to characterize membrane proteins in a native-like environment. These complexes take the form of oligomeric structures and hetero-protein interactions both with water-soluble proteins and other membrane proteins.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 24034903      PMCID: PMC3855169          DOI: 10.1016/j.sbi.2013.08.004

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  73 in total

1.  Cellular solid-state nuclear magnetic resonance spectroscopy.

Authors:  Marie Renault; Ria Tommassen-van Boxtel; Martine P Bos; Jan Andries Post; Jan Tommassen; Marc Baldus
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-13       Impact factor: 11.205

2.  Crystal structure of the DsbB-DsbA complex reveals a mechanism of disulfide bond generation.

Authors:  Kenji Inaba; Satoshi Murakami; Mamoru Suzuki; Atsushi Nakagawa; Eiki Yamashita; Kengo Okada; Koreaki Ito
Journal:  Cell       Date:  2006-11-17       Impact factor: 41.582

3.  Inferential structure determination.

Authors:  Wolfgang Rieping; Michael Habeck; Michael Nilges
Journal:  Science       Date:  2005-07-08       Impact factor: 47.728

4.  Structural rearrangements of membrane proteins probed by water-edited solid-state NMR spectroscopy.

Authors:  Christian Ader; Robert Schneider; Karsten Seidel; Manuel Etzkorn; Stefan Becker; Marc Baldus
Journal:  J Am Chem Soc       Date:  2009-01-14       Impact factor: 15.419

5.  High-resolution polypeptide structure in a lamellar phase lipid environment from solid state NMR derived orientational constraints.

Authors:  R Ketchem; B Roux; T Cross
Journal:  Structure       Date:  1997-12-15       Impact factor: 5.006

6.  Solid-state NMR study of a 41 kDa membrane protein complex DsbA/DsbB.

Authors:  Lindsay J Sperling; Ming Tang; Deborah A Berthold; Anna E Nesbitt; Robert B Gennis; Chad M Rienstra
Journal:  J Phys Chem B       Date:  2013-05-09       Impact factor: 2.991

Review 7.  Solid-state NMR of nanomachines involved in photosynthetic energy conversion.

Authors:  A Alia; Francesco Buda; Huub J M de Groot; Jörg Matysik
Journal:  Annu Rev Biophys       Date:  2013       Impact factor: 12.981

8.  Curvature and hydrophobic forces drive oligomerization and modulate activity of rhodopsin in membranes.

Authors:  Ana Vitória Botelho; Thomas Huber; Thomas P Sakmar; Michael F Brown
Journal:  Biophys J       Date:  2006-09-29       Impact factor: 4.033

9.  An NMR comparison of the light-harvesting complex II (LHCII) in active and photoprotective states reveals subtle changes in the chlorophyll a ground-state electronic structures.

Authors:  Anjali Pandit; Michael Reus; Tomas Morosinotto; Roberto Bassi; Alfred R Holzwarth; Huub J M de Groot
Journal:  Biochim Biophys Acta       Date:  2013-03-04

Review 10.  Structural and dynamic basis of phospholamban and sarcolipin inhibition of Ca(2+)-ATPase.

Authors:  Nathaniel J Traaseth; Kim N Ha; Raffaello Verardi; Lei Shi; Jarrod J Buffy; Larry R Masterson; Gianluigi Veglia
Journal:  Biochemistry       Date:  2007-12-15       Impact factor: 3.162

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  14 in total

1.  Beyond Structural Biology to Functional Biology: Solid-State NMR Experiments and Strategies for Understanding the M2 Proton Channel Conductance.

Authors:  Huajun Qin; Yimin Miao; Timothy A Cross; Riqiang Fu
Journal:  J Phys Chem B       Date:  2017-05-02       Impact factor: 2.991

2.  1H-detected MAS solid-state NMR experiments enable the simultaneous mapping of rigid and dynamic domains of membrane proteins.

Authors:  T Gopinath; Sarah E D Nelson; Gianluigi Veglia
Journal:  J Magn Reson       Date:  2017-12       Impact factor: 2.229

3.  Spontaneous Lipid Nanodisc Fomation by Amphiphilic Polymethacrylate Copolymers.

Authors:  Kazuma Yasuhara; Jin Arakida; Thirupathi Ravula; Sudheer Kumar Ramadugu; Bikash Sahoo; Jun-Ichi Kikuchi; Ayyalusamy Ramamoorthy
Journal:  J Am Chem Soc       Date:  2017-12-05       Impact factor: 15.419

4.  Simultaneous acquisition of 2D and 3D solid-state NMR experiments for sequential assignment of oriented membrane protein samples.

Authors:  T Gopinath; Kaustubh R Mote; Gianluigi Veglia
Journal:  J Biomol NMR       Date:  2015-03-07       Impact factor: 2.835

5.  Probing Residue-Specific Water-Protein Interactions in Oriented Lipid Membranes via Solid-State NMR Spectroscopy.

Authors:  Alysha Dicke; T Gopinath; Yingjie Wang; Gianluigi Veglia
Journal:  J Phys Chem B       Date:  2016-10-18       Impact factor: 2.991

6.  Binding of a small molecule water channel inhibitor to aquaporin Z examined by solid-state MAS NMR.

Authors:  Margaret Phillips; Janet To; Toshio Yamazaki; Toshio Nagashima; Jaume Torres; Konstantin Pervushin
Journal:  J Biomol NMR       Date:  2018-06-18       Impact factor: 2.835

7.  Structural studies of proteins by paramagnetic solid-state NMR spectroscopy.

Authors:  Christopher P Jaroniec
Journal:  J Magn Reson       Date:  2015-04       Impact factor: 2.229

8.  Multiple acquisition of magic angle spinning solid-state NMR experiments using one receiver: application to microcrystalline and membrane protein preparations.

Authors:  T Gopinath; Gianluigi Veglia
Journal:  J Magn Reson       Date:  2015-04       Impact factor: 2.229

9.  Probing Hydronium Ion Histidine NH Exchange Rate Constants in the M2 Channel via Indirect Observation of Dipolar-Dephased 15N Signals in Magic-Angle-Spinning NMR.

Authors:  Riqiang Fu; Yimin Miao; Huajun Qin; Timothy A Cross
Journal:  J Am Chem Soc       Date:  2016-12-01       Impact factor: 15.419

Review 10.  Drugging Membrane Protein Interactions.

Authors:  Hang Yin; Aaron D Flynn
Journal:  Annu Rev Biomed Eng       Date:  2016-02-05       Impact factor: 9.590

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