Literature DB >> 25797004

Structural studies of proteins by paramagnetic solid-state NMR spectroscopy.

Christopher P Jaroniec1.   

Abstract

Paramagnetism-based nuclear pseudocontact shifts and spin relaxation enhancements contain a wealth of information in solid-state NMR spectra about electron-nucleus distances on the ∼20 Å length scale, far beyond that normally probed through measurements of nuclear dipolar couplings. Such data are especially vital in the context of structural studies of proteins and other biological molecules that suffer from a sparse number of experimentally-accessible atomic distances constraining their three-dimensional fold or intermolecular interactions. This perspective provides a brief overview of the recent developments and applications of paramagnetic magic-angle spinning NMR to biological systems, with primary focus on the investigations of metalloproteins and natively diamagnetic proteins modified with covalent paramagnetic tags.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Magic-angle spinning; Paramagnetic relaxation enhancement; Protein structure; Pseudocontact shift; Solid-state NMR

Mesh:

Substances:

Year:  2015        PMID: 25797004      PMCID: PMC4371136          DOI: 10.1016/j.jmr.2014.12.017

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  91 in total

1.  Probing membrane surfaces and the location of membrane-embedded peptides by (13)C MAS NMR using lanthanide ions.

Authors:  G Gröbner; C Glaubitz; A Watts
Journal:  J Magn Reson       Date:  1999-12       Impact factor: 2.229

Review 2.  NMR in structural proteomics and beyond.

Authors:  Lucia Banci; Ivano Bertini; Claudio Luchinat; Mirko Mori
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-01-13       Impact factor: 9.795

3.  Rapid acquisition of multidimensional solid-state NMR spectra of proteins facilitated by covalently bound paramagnetic tags.

Authors:  Philippe S Nadaud; Jonathan J Helmus; Ishita Sengupta; Christopher P Jaroniec
Journal:  J Am Chem Soc       Date:  2010-07-21       Impact factor: 15.419

Review 4.  Dipolar recoupling in MAS spectra of biological solids.

Authors:  R G Griffin
Journal:  Nat Struct Biol       Date:  1998-07

5.  A proton-detected 4D solid-state NMR experiment for protein structure determination.

Authors:  Matthias Huber; Sebastian Hiller; Paul Schanda; Matthias Ernst; Anja Böckmann; René Verel; Beat H Meier
Journal:  Chemphyschem       Date:  2011-02-15       Impact factor: 3.102

6.  Nuclear magnetic resonance of hemeprotein crystals. Structure of the heme in Physeter catodon ferrimyoglobin and an analysis of hyperfine shifts.

Authors:  R W Lee; E Oldfield
Journal:  J Biol Chem       Date:  1982-05-10       Impact factor: 5.157

7.  Structure of the KcsA potassium channel from Streptomyces lividans: a site-directed spin labeling study of the second transmembrane segment.

Authors:  A Gross; L Columbus; K Hideg; C Altenbach; W L Hubbell
Journal:  Biochemistry       Date:  1999-08-10       Impact factor: 3.162

8.  Evaluation of the influence of intermolecular electron-nucleus couplings and intrinsic metal binding sites on the measurement of 15N longitudinal paramagnetic relaxation enhancements in proteins by solid-state NMR.

Authors:  Philippe S Nadaud; Ishita Sengupta; Jonathan J Helmus; Christopher P Jaroniec
Journal:  J Biomol NMR       Date:  2011-08-09       Impact factor: 2.835

Review 9.  Solid-state NMR studies of amyloid fibril structure.

Authors:  Robert Tycko
Journal:  Annu Rev Phys Chem       Date:  2011       Impact factor: 12.703

10.  Protein fold determined by paramagnetic magic-angle spinning solid-state NMR spectroscopy.

Authors:  Ishita Sengupta; Philippe S Nadaud; Jonathan J Helmus; Charles D Schwieters; Christopher P Jaroniec
Journal:  Nat Chem       Date:  2012-03-18       Impact factor: 24.427

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  15 in total

1.  Peptide bond conformation in peptides and proteins probed by dipolar coupling-chemical shift tensor correlation solid-state NMR.

Authors:  Dwaipayan Mukhopadhyay; Chitrak Gupta; Theint Theint; Christopher P Jaroniec
Journal:  J Magn Reson       Date:  2018-10-30       Impact factor: 2.229

2.  A protocol for the refinement of NMR structures using simultaneously pseudocontact shift restraints from multiple lanthanide ions.

Authors:  Davide Sala; Andrea Giachetti; Claudio Luchinat; Antonio Rosato
Journal:  J Biomol NMR       Date:  2016-10-22       Impact factor: 2.835

3.  Rapid Quantitative Measurements of Paramagnetic Relaxation Enhancements in Cu(II)-Tagged Proteins by Proton-Detected Solid-State NMR Spectroscopy.

Authors:  Dwaipayan Mukhopadhyay; Philippe S Nadaud; Matthew D Shannon; Christopher P Jaroniec
Journal:  J Phys Chem Lett       Date:  2017-11-20       Impact factor: 6.475

Review 4.  New NMR tools for protein structure and function: Spin tags for dynamic nuclear polarization solid state NMR.

Authors:  Rivkah Rogawski; Ann E McDermott
Journal:  Arch Biochem Biophys       Date:  2017-06-13       Impact factor: 4.013

Review 5.  Insights into protein misfolding and aggregation enabled by solid-state NMR spectroscopy.

Authors:  Patrick C A van der Wel
Journal:  Solid State Nucl Magn Reson       Date:  2017-10-04       Impact factor: 2.293

6.  Structure determination of uniformly (13)C, (15)N labeled protein using qualitative distance restraints from MAS solid-state (13)C-NMR observed paramagnetic relaxation enhancement.

Authors:  Hajime Tamaki; Ayako Egawa; Kouki Kido; Tomoshi Kameda; Masakatsu Kamiya; Takashi Kikukawa; Tomoyasu Aizawa; Toshimichi Fujiwara; Makoto Demura
Journal:  J Biomol NMR       Date:  2016-01-04       Impact factor: 2.835

7.  Two decades of progress in structural and dynamic studies of amyloids by solid-state NMR.

Authors:  Christopher P Jaroniec
Journal:  J Magn Reson       Date:  2019-07-09       Impact factor: 2.229

8.  The Target of β-Expansin EXPB1 in Maize Cell Walls from Binding and Solid-State NMR Studies.

Authors:  Tuo Wang; Yuning Chen; Akira Tabuchi; Daniel J Cosgrove; Mei Hong
Journal:  Plant Physiol       Date:  2016-10-11       Impact factor: 8.340

9.  NMR Signal Quenching from Bound Biradical Affinity Reagents in DNP Samples.

Authors:  Rivkah Rogawski; Ivan V Sergeyev; Yinglu Zhang; Timothy H Tran; Yongjun Li; Liang Tong; Ann E McDermott
Journal:  J Phys Chem B       Date:  2017-11-29       Impact factor: 2.991

10.  Structural Studies of Amyloid Fibrils by Paramagnetic Solid-State Nuclear Magnetic Resonance Spectroscopy.

Authors:  Theint Theint; Yongjie Xia; Philippe S Nadaud; Dwaipayan Mukhopadhyay; Charles D Schwieters; Krystyna Surewicz; Witold K Surewicz; Christopher P Jaroniec
Journal:  J Am Chem Soc       Date:  2018-10-09       Impact factor: 15.419

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