Literature DB >> 25797011

Multiple acquisition of magic angle spinning solid-state NMR experiments using one receiver: application to microcrystalline and membrane protein preparations.

T Gopinath1, Gianluigi Veglia2.   

Abstract

Solid-state NMR spectroscopy of proteins is a notoriously low-throughput technique. Relatively low-sensitivity and poor resolution of protein samples require long acquisition times for multidimensional NMR experiments. To speed up data acquisition, we developed a family of experiments called Polarization Optimized Experiments (POE), in which we utilized the orphan spin operators that are discarded in classical multidimensional NMR experiments, recovering them to allow simultaneous acquisition of multiple 2D and 3D experiments, all while using conventional probes with spectrometers equipped with one receiver. POE allow the concatenation of multiple 2D or 3D pulse sequences into a single experiment, thus potentially combining all of the aforementioned advances, boosting the capability of ssNMR spectrometers at least two-fold without the addition of any hardware. In this perspective, we describe the first generation of POE, such as dual acquisition MAS (or DUMAS) methods, and then illustrate the evolution of these experiments into MEIOSIS, a method that enables the simultaneous acquisition of multiple 2D and 3D spectra. Using these new pulse schemes for the solid-state NMR investigation of biopolymers makes it possible to obtain sequential resonance assignments, as well as distance restraints, in about half the experimental time. While designed for acquisition of heteronuclei, these new experiments can be easily implemented for proton detection and coupled with other recent advancements, such as dynamic nuclear polarization (DNP), to improve signal to noise. Finally, we illustrate the application of these methods to microcrystalline protein preparations as well as single and multi-span membrane proteins reconstituted in lipid membranes.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  DUMAS; MEIOSIS; Magic angle spinning; Membrane proteins; Microcrystalline proteins; Multiple acquisition; Polarization optimized experiments; Solid-state NMR

Mesh:

Substances:

Year:  2015        PMID: 25797011      PMCID: PMC4399235          DOI: 10.1016/j.jmr.2015.01.001

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  41 in total

Review 1.  Resolution and sensitivity of high field nuclear magnetic resonance spectroscopy.

Authors:  D Rovnyak; J C Hoch; A S Stern; G Wagner
Journal:  J Biomol NMR       Date:  2004-09       Impact factor: 2.835

Review 2.  Dynamic nuclear polarization at high magnetic fields.

Authors:  Thorsten Maly; Galia T Debelouchina; Vikram S Bajaj; Kan-Nian Hu; Chan-Gyu Joo; Melody L Mak-Jurkauskas; Jagadishwar R Sirigiri; Patrick C A van der Wel; Judith Herzfeld; Richard J Temkin; Robert G Griffin
Journal:  J Chem Phys       Date:  2008-02-07       Impact factor: 3.488

Review 3.  Structure and dynamics of membrane proteins by magic angle spinning solid-state NMR.

Authors:  Ann McDermott
Journal:  Annu Rev Biophys       Date:  2009       Impact factor: 12.981

4.  Spin diffusion in resolved solid-state NMR spectra.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1985-11-01

5.  De novo 3D structure determination from sub-milligram protein samples by solid-state 100 kHz MAS NMR spectroscopy.

Authors:  Vipin Agarwal; Susanne Penzel; Kathrin Szekely; Riccardo Cadalbert; Emilie Testori; Andres Oss; Jaan Past; Ago Samoson; Matthias Ernst; Anja Böckmann; Beat H Meier
Journal:  Angew Chem Int Ed Engl       Date:  2014-09-15       Impact factor: 15.336

6.  Two-dimensional solid-state NMR reveals two topologies of sarcolipin in oriented lipid bilayers.

Authors:  Jarrod J Buffy; Nathaniel J Traaseth; Alessandro Mascioni; Peter L Gor'kov; Eduard Y Chekmenev; William W Brey; Gianluigi Veglia
Journal:  Biochemistry       Date:  2006-09-12       Impact factor: 3.162

Review 7.  Solid state NMR and protein-protein interactions in membranes.

Authors:  Yimin Miao; Timothy A Cross
Journal:  Curr Opin Struct Biol       Date:  2013-09-11       Impact factor: 6.809

8.  Utilizing afterglow magnetization from cross-polarization magic-angle-spinning solid-state NMR spectroscopy to obtain simultaneous heteronuclear multidimensional spectra.

Authors:  James R Banigan; Nathaniel J Traaseth
Journal:  J Phys Chem B       Date:  2012-05-31       Impact factor: 2.991

9.  Dynamic nuclear polarization surface enhanced NMR spectroscopy.

Authors:  Aaron J Rossini; Alexandre Zagdoun; Moreno Lelli; Anne Lesage; Christophe Copéret; Lyndon Emsley
Journal:  Acc Chem Res       Date:  2013-03-21       Impact factor: 22.384

Review 10.  Structural and dynamic basis of phospholamban and sarcolipin inhibition of Ca(2+)-ATPase.

Authors:  Nathaniel J Traaseth; Kim N Ha; Raffaello Verardi; Lei Shi; Jarrod J Buffy; Larry R Masterson; Gianluigi Veglia
Journal:  Biochemistry       Date:  2007-12-15       Impact factor: 3.162

View more
  7 in total

1.  Hybridization of TEDOR and NCX MAS solid-state NMR experiments for simultaneous acquisition of heteronuclear correlation spectra and distance measurements.

Authors:  T Gopinath; Songlin Wang; John Lee; Hideki Aihara; Gianluigi Veglia
Journal:  J Biomol NMR       Date:  2019-02-25       Impact factor: 2.835

2.  Efficient assignment and NMR analysis of an intact virus using sequential side-chain correlations and DNP sensitization.

Authors:  Ivan V Sergeyev; Boris Itin; Rivkah Rogawski; Loren A Day; Ann E McDermott
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-01       Impact factor: 11.205

3.  Orphan spin polarization: A catalyst for high-throughput solid-state NMR spectroscopy of proteins.

Authors:  T Gopinath; Gianluigi Veglia
Journal:  Annu Rep NMR Spectrosc       Date:  2016-06-07       Impact factor: 3.000

4.  Multiple acquisitions via sequential transfer of orphan spin polarization (MAeSTOSO): How far can we push residual spin polarization in solid-state NMR?

Authors:  T Gopinath; Gianluigi Veglia
Journal:  J Magn Reson       Date:  2016-03-19       Impact factor: 2.229

5.  Proton-detected polarization optimized experiments (POE) using ultrafast magic angle spinning solid-state NMR: Multi-acquisition of membrane protein spectra.

Authors:  T Gopinath; Gianluigi Veglia
Journal:  J Magn Reson       Date:  2019-11-28       Impact factor: 2.229

6.  Multi-receiver solid-state NMR using polarization optimized experiments (POE) at ultrafast magic angle spinning.

Authors:  T Gopinath; Daniel K Weber; Gianluigi Veglia
Journal:  J Biomol NMR       Date:  2020-04-24       Impact factor: 2.835

7.  ssPINE: Probabilistic Algorithm for Automated Chemical Shift Assignment of Solid-State NMR Data from Complex Protein Systems.

Authors:  Adilakshmi Dwarasala; Mehdi Rahimi; John L Markley; Woonghee Lee
Journal:  Membranes (Basel)       Date:  2022-08-26
  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.