Literature DB >> 23285617

Analysis of longitudinal shape variability via subject specific growth modeling.

James Fishbaugh1, Marcel Prastawa, Stanley Durrleman, Joseph Piven, Guido Gerig.   

Abstract

Statistical analysis of longitudinal imaging data is crucial for understanding normal anatomical development as well as disease progression. This fundamental task is challenging due to the difficulty in modeling longitudinal changes, such as growth, and comparing changes across different populations. We propose a new approach for analyzing shape variability over time, and for quantifying spatiotemporal population differences. Our approach estimates 4D anatomical growth models for a reference population (an average model) and for individuals in different groups. We define a reference 4D space for our analysis as the average population model and measure shape variability through diffeomorphisms that map the reference to the individuals. Conducting our analysis on this 4D space enables straightforward statistical analysis of deformations as they are parameterized by momenta vectors that are located at homologous locations in space and time. We evaluate our method on a synthetic shape database and clinical data from a study that seeks to quantify brain growth differences in infants at risk for autism.

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Year:  2012        PMID: 23285617      PMCID: PMC3744241          DOI: 10.1007/978-3-642-33415-3_90

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  6 in total

Review 1.  On the metrics and euler-lagrange equations of computational anatomy.

Authors:  Michael I Miller; Alain Trouve; Laurent Younes
Journal:  Annu Rev Biomed Eng       Date:  2002-03-22       Impact factor: 9.590

2.  Estimation of smooth growth trajectories with controlled acceleration from time series shape data.

Authors:  James Fishbaugh; Stanley Durrleman; Guido Gerig
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

3.  Geodesic regression for image time-series.

Authors:  Marc Niethammer; Yang Huang; François-Xavier Vialard
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

4.  Surface matching via currents.

Authors:  Marc Vaillant; Joan Glaunès
Journal:  Inf Process Med Imaging       Date:  2005

5.  A novel framework for longitudinal atlas construction with groupwise registration of subject image sequences.

Authors:  Shu Liao; Hongjun Jia; Guorong Wu; Dinggang Shen
Journal:  Neuroimage       Date:  2011-08-22       Impact factor: 6.556

6.  Spatiotemporal atlas estimation for developmental delay detection in longitudinal datasets.

Authors:  Stanley Durrleman; Xavier Pennec; Alain Trouvé; Guido Gerig; Nicholas Ayache
Journal:  Med Image Comput Comput Assist Interv       Date:  2009
  6 in total
  10 in total

1.  Geodesic shape regression in the framework of currents.

Authors:  James Fishbaugh; Marcel Prastawa; Guido Gerig; Stanley Durrleman
Journal:  Inf Process Med Imaging       Date:  2013

2.  Geodesic image regression with a sparse parameterization of diffeomorphisms.

Authors:  James Fishbaugh; Marcel Prastawa; Guido Gerig; Stanley Durrleman
Journal:  Geom Sci Inf (2013)       Date:  2013

3.  Nonparametric Aggregation of Geodesic Trends for Longitudinal Data Analysis.

Authors:  Kristen M Campbell; P Thomas Fletcher
Journal:  Shape Med Imaging (2018)       Date:  2018-11-23

4.  Brain structure in sagittal craniosynostosis.

Authors:  Beatriz Paniagua; Sunghyung Kim; Mahmoud Moustapha; Martin Styner; Heather Cody-Hazlett; Rachel Gimple-Smith; Ashley Rumple; Joseph Piven; John Gilmore; Gary Skolnick; Kamlesh Patel
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-03-13

Review 5.  Revolution of Alzheimer Precision Neurology. Passageway of Systems Biology and Neurophysiology.

Authors:  Harald Hampel; Nicola Toschi; Claudio Babiloni; Filippo Baldacci; Keith L Black; Arun L W Bokde; René S Bun; Francesco Cacciola; Enrica Cavedo; Patrizia A Chiesa; Olivier Colliot; Cristina-Maria Coman; Bruno Dubois; Andrea Duggento; Stanley Durrleman; Maria-Teresa Ferretti; Nathalie George; Remy Genthon; Marie-Odile Habert; Karl Herholz; Yosef Koronyo; Maya Koronyo-Hamaoui; Foudil Lamari; Todd Langevin; Stéphane Lehéricy; Jean Lorenceau; Christian Neri; Robert Nisticò; Francis Nyasse-Messene; Craig Ritchie; Simone Rossi; Emiliano Santarnecchi; Olaf Sporns; Steven R Verdooner; Andrea Vergallo; Nicolas Villain; Erfan Younesi; Francesco Garaci; Simone Lista
Journal:  J Alzheimers Dis       Date:  2018       Impact factor: 4.472

6.  Geodesic shape regression with multiple geometries and sparse parameters.

Authors:  James Fishbaugh; Stanley Durrleman; Marcel Prastawa; Guido Gerig
Journal:  Med Image Anal       Date:  2017-04-05       Impact factor: 8.545

7.  Longitudinal modeling of appearance and shape and its potential for clinical use.

Authors:  Guido Gerig; James Fishbaugh; Neda Sadeghi
Journal:  Med Image Anal       Date:  2016-06-15       Impact factor: 8.545

8.  Interpolation of Longitudinal Shape and Image Data via Optimal Mass Transport.

Authors:  Yi Gao; Liang-Jia Zhu; Sylvain Bouix; Allen Tannenbaum
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2014-03-21

9.  Subject-Specific Longitudinal Shape Analysis by Coupling Spatiotemporal Shape Modeling with Medial Analysis.

Authors:  Sungmin Hong; James Fishbaugh; Morteza Rezanejad; Kaleem Siddiqi; Hans Johnson; Jane Paulsen; Eun Young Kim; Guido Gerig
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-04

10.  Embryonic heart morphogenesis from confocal microscopy imaging and automatic segmentation.

Authors:  Hongda Mao; Megan Gribble; Arkady M Pertsov; Pengcheng Shi
Journal:  Comput Math Methods Med       Date:  2013-12-23       Impact factor: 2.238

  10 in total

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