Literature DB >> 25664349

Geodesic image regression with a sparse parameterization of diffeomorphisms.

James Fishbaugh1, Marcel Prastawa2, Guido Gerig, Stanley Durrleman.   

Abstract

Image regression allows for time-discrete imaging data to be modeled continuously, and is a crucial tool for conducting statistical analysis on longitudinal images. Geodesic models are particularly well suited for statistical analysis, as image evolution is fully characterized by a baseline image and initial momenta. However, existing geodesic image regression models are parameterized by a large number of initial momenta, equal to the number of image voxels. In this paper, we present a sparse geodesic image regression framework which greatly reduces the number of model parameters. We combine a control point formulation of deformations with a L1 penalty to select the most relevant subset of momenta. This way, the number of model parameters reflects the complexity of anatomical changes in time rather than the sampling of the image. We apply our method to both synthetic and real data and show that we can decrease the number of model parameters (from the number of voxels down to hundreds) with only minimal decrease in model accuracy. The reduction in model parameters has the potential to improve the power of ensuing statistical analysis, which faces the challenging problem of high dimensionality.

Entities:  

Year:  2013        PMID: 25664349      PMCID: PMC4316381          DOI: 10.1007/978-3-642-40020-9_9

Source DB:  PubMed          Journal:  Geom Sci Inf (2013)


  8 in total

1.  Estimation of smooth growth trajectories with controlled acceleration from time series shape data.

Authors:  James Fishbaugh; Stanley Durrleman; Guido Gerig
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

2.  Geodesic regression for image time-series.

Authors:  Marc Niethammer; Yang Huang; François-Xavier Vialard
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

3.  Schild's ladder for the parallel transport of deformations in time series of images.

Authors:  Marco Lorenzi; Nicholas Ayache; Xavier Pennec
Journal:  Inf Process Med Imaging       Date:  2011

4.  A novel framework for longitudinal atlas construction with groupwise registration of subject image sequences.

Authors:  Shu Liao; Hongjun Jia; Guorong Wu; Dinggang Shen
Journal:  Neuroimage       Date:  2011-08-22       Impact factor: 6.556

5.  A hierarchical geodesic model for diffeomorphic longitudinal shape analysis.

Authors:  Nikhil Singh; Jacob Hinkle; Sarang Joshi; P Thomas Fletcher
Journal:  Inf Process Med Imaging       Date:  2013

6.  A VECTOR MOMENTA FORMULATION OF DIFFEOMORPHISMS FOR IMPROVED GEODESIC REGRESSION AND ATLAS CONSTRUCTION.

Authors:  Nikhil Singh; Jacob Hinkle; Sarang Joshi; P Thomas Fletcher
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2013-04

7.  Toward a comprehensive framework for the spatiotemporal statistical analysis of longitudinal shape data.

Authors:  S Durrleman; X Pennec; A Trouvé; J Braga; G Gerig; N Ayache
Journal:  Int J Comput Vis       Date:  2013-05       Impact factor: 7.410

8.  Analysis of longitudinal shape variability via subject specific growth modeling.

Authors:  James Fishbaugh; Marcel Prastawa; Stanley Durrleman; Joseph Piven; Guido Gerig
Journal:  Med Image Comput Comput Assist Interv       Date:  2012
  8 in total
  2 in total

1.  Image reconstruction by domain-transform manifold learning.

Authors:  Bo Zhu; Jeremiah Z Liu; Stephen F Cauley; Bruce R Rosen; Matthew S Rosen
Journal:  Nature       Date:  2018-03-21       Impact factor: 49.962

2.  Geodesic shape regression with multiple geometries and sparse parameters.

Authors:  James Fishbaugh; Stanley Durrleman; Marcel Prastawa; Guido Gerig
Journal:  Med Image Anal       Date:  2017-04-05       Impact factor: 8.545

  2 in total

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