Literature DB >> 24684012

Geodesic shape regression in the framework of currents.

James Fishbaugh, Marcel Prastawa, Guido Gerig, Stanley Durrleman.   

Abstract

Shape regression is emerging as an important tool for the statistical analysis of time dependent shapes. In this paper, we develop a new generative model which describes shape change over time, by extending simple linear regression to the space of shapes represented as currents in the large deformation diffeomorphic metric mapping (LDDMM) framework. By analogy with linear regression, we estimate a baseline shape (intercept) and initial momenta (slope) which fully parameterize the geodesic shape evolution. This is in contrast to previous shape regression methods which assume the baseline shape is fixed. We further leverage a control point formulation, which provides a discrete and low dimensional parameterization of large diffeomorphic transformations. This flexible system decouples the parameterization of deformations from the specific shape representation, allowing the user to define the dimensionality of the deformation parameters. We present an optimization scheme that estimates the baseline shape, location of the control points, and initial momenta simultaneously via a single gradient descent algorithm. Finally, we demonstrate our proposed method on synthetic data as well as real anatomical shape complexes.

Entities:  

Mesh:

Year:  2013        PMID: 24684012      PMCID: PMC4127488          DOI: 10.1007/978-3-642-38868-2_60

Source DB:  PubMed          Journal:  Inf Process Med Imaging        ISSN: 1011-2499


  11 in total

1.  In vivo fiber tractography using DT-MRI data.

Authors:  P J Basser; S Pajevic; C Pierpaoli; J Duda; A Aldroubi
Journal:  Magn Reson Med       Date:  2000-10       Impact factor: 4.668

2.  Estimation of smooth growth trajectories with controlled acceleration from time series shape data.

Authors:  James Fishbaugh; Stanley Durrleman; Guido Gerig
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

3.  Geodesic regression for image time-series.

Authors:  Marc Niethammer; Yang Huang; François-Xavier Vialard
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

4.  A statistical model for quantification and prediction of cardiac remodelling: application to tetralogy of Fallot.

Authors:  T Mansi; I Voigt; B Leonardi; X Pennec; S Durrleman; M Sermesant; H Delingette; A M Taylor; Y Boudjemline; G Pongiglione; N Ayache
Journal:  IEEE Trans Med Imaging       Date:  2011-09       Impact factor: 10.048

5.  Schild's ladder for the parallel transport of deformations in time series of images.

Authors:  Marco Lorenzi; Nicholas Ayache; Xavier Pennec
Journal:  Inf Process Med Imaging       Date:  2011

6.  A novel framework for longitudinal atlas construction with groupwise registration of subject image sequences.

Authors:  Shu Liao; Hongjun Jia; Guorong Wu; Dinggang Shen
Journal:  Neuroimage       Date:  2011-08-22       Impact factor: 6.556

7.  Particle based shape regression of open surfaces with applications to developmental neuroimaging.

Authors:  Manasi Datar; Joshua Cates; P Thomas Fletcher; Sylvain Gouttard; Guido Gerig; Ross Whitaker
Journal:  Med Image Comput Comput Assist Interv       Date:  2009

8.  Toward a comprehensive framework for the spatiotemporal statistical analysis of longitudinal shape data.

Authors:  S Durrleman; X Pennec; A Trouvé; J Braga; G Gerig; N Ayache
Journal:  Int J Comput Vis       Date:  2013-05       Impact factor: 7.410

9.  Analysis of longitudinal shape variability via subject specific growth modeling.

Authors:  James Fishbaugh; Marcel Prastawa; Stanley Durrleman; Joseph Piven; Guido Gerig
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

10.  Topology preserving atlas construction from shape data without correspondence using sparse parameters.

Authors:  Stanley Durrleman; Marcel Prastawa; Julie R Korenberg; Sarang Joshi; Alain Trouvé; Guido Gerig
Journal:  Med Image Comput Comput Assist Interv       Date:  2012
View more
  12 in total

1.  Modeling 4D Pathological Changes by Leveraging Normative Models.

Authors:  Bo Wang; Marcel Prastawa; Andrei Irimia; Avishek Saha; Wei Liu; S Y Matthew Goh; Paul M Vespa; John D Van Horn; Guido Gerig
Journal:  Comput Vis Image Underst       Date:  2016-10       Impact factor: 3.876

Review 2.  Computational neuroanatomy of baby brains: A review.

Authors:  Gang Li; Li Wang; Pew-Thian Yap; Fan Wang; Zhengwang Wu; Yu Meng; Pei Dong; Jaeil Kim; Feng Shi; Islem Rekik; Weili Lin; Dinggang Shen
Journal:  Neuroimage       Date:  2018-03-21       Impact factor: 6.556

3.  Brain structure in sagittal craniosynostosis.

Authors:  Beatriz Paniagua; Sunghyung Kim; Mahmoud Moustapha; Martin Styner; Heather Cody-Hazlett; Rachel Gimple-Smith; Ashley Rumple; Joseph Piven; John Gilmore; Gary Skolnick; Kamlesh Patel
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-03-13

Review 4.  Revolution of Alzheimer Precision Neurology. Passageway of Systems Biology and Neurophysiology.

Authors:  Harald Hampel; Nicola Toschi; Claudio Babiloni; Filippo Baldacci; Keith L Black; Arun L W Bokde; René S Bun; Francesco Cacciola; Enrica Cavedo; Patrizia A Chiesa; Olivier Colliot; Cristina-Maria Coman; Bruno Dubois; Andrea Duggento; Stanley Durrleman; Maria-Teresa Ferretti; Nathalie George; Remy Genthon; Marie-Odile Habert; Karl Herholz; Yosef Koronyo; Maya Koronyo-Hamaoui; Foudil Lamari; Todd Langevin; Stéphane Lehéricy; Jean Lorenceau; Christian Neri; Robert Nisticò; Francis Nyasse-Messene; Craig Ritchie; Simone Rossi; Emiliano Santarnecchi; Olaf Sporns; Steven R Verdooner; Andrea Vergallo; Nicolas Villain; Erfan Younesi; Francesco Garaci; Simone Lista
Journal:  J Alzheimers Dis       Date:  2018       Impact factor: 4.472

5.  GEODESIC REGRESSION OF IMAGE AND SHAPE DATA FOR IMPROVED MODELING OF 4D TRAJECTORIES.

Authors:  James Fishbaugh; Marcel Prastawa; Guido Gerig; Stanley Durrleman
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2014-04

6.  Diffeomorphic shape trajectories for improved longitudinal segmentation and statistics.

Authors:  Prasanna Muralidharan; James Fishbaugh; Hans J Johnson; Stanley Durrleman; Jane S Paulsen; Guido Gerig; P Thomas Fletcher
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

7.  Geodesic shape regression with multiple geometries and sparse parameters.

Authors:  James Fishbaugh; Stanley Durrleman; Marcel Prastawa; Guido Gerig
Journal:  Med Image Anal       Date:  2017-04-05       Impact factor: 8.545

8.  Predicting infant cortical surface development using a 4D varifold-based learning framework and local topography-based shape morphing.

Authors:  Islem Rekik; Gang Li; Weili Lin; Dinggang Shen
Journal:  Med Image Anal       Date:  2015-11-10       Impact factor: 8.545

9.  Joint prediction of longitudinal development of cortical surfaces and white matter fibers from neonatal MRI.

Authors:  Islem Rekik; Gang Li; Pew-Thian Yap; Geng Chen; Weili Lin; Dinggang Shen
Journal:  Neuroimage       Date:  2017-03-09       Impact factor: 6.556

10.  Subject-Specific Longitudinal Shape Analysis by Coupling Spatiotemporal Shape Modeling with Medial Analysis.

Authors:  Sungmin Hong; James Fishbaugh; Morteza Rezanejad; Kaleem Siddiqi; Hans Johnson; Jane Paulsen; Eun Young Kim; Guido Gerig
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-04
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.