Literature DB >> 25302008

Interpolation of Longitudinal Shape and Image Data via Optimal Mass Transport.

Yi Gao1, Liang-Jia Zhu2, Sylvain Bouix3, Allen Tannenbaum2.   

Abstract

Longitudinal analysis of medical imaging data has become central to the study of many disorders. Unfortunately, various constraints (study design, patient availability, technological limitations) restrict the acquisition of data to only a few time points, limiting the study of continuous disease/treatment progression. Having the ability to produce a sensible time interpolation of the data can lead to improved analysis, such as intuitive visualizations of anatomical changes, or the creation of more samples to improve statistical analysis. In this work, we model interpolation of medical image data, in particular shape data, using the theory of optimal mass transport (OMT), which can construct a continuous transition from two time points while preserving "mass" (e.g., image intensity, shape volume) during the transition. The theory even allows a short extrapolation in time and may help predict short-term treatment impact or disease progression on anatomical structure. We apply the proposed method to the hippocampus-amygdala complex in schizophrenia, the heart in atrial fibrillation, and full head MR images in traumatic brain injury.

Entities:  

Year:  2014        PMID: 25302008      PMCID: PMC4187117          DOI: 10.1117/12.2043282

Source DB:  PubMed          Journal:  Proc SPIE Int Soc Opt Eng        ISSN: 0277-786X


  15 in total

1.  A reconstruction of the initial conditions of the universe by optimal mass transportation.

Authors:  Uriel Frisch; Sabino Matarrese; Roya Mohayaee; Andrei Sobolevski
Journal:  Nature       Date:  2002-05-16       Impact factor: 49.962

2.  AN EFFICIENT NUMERICAL METHOD FOR THE SOLUTION OF THE L(2) OPTIMAL MASS TRANSFER PROBLEM.

Authors:  Eldad Haber; Tauseef Rehman; Allen Tannenbaum
Journal:  SIAM J Sci Comput       Date:  2010       Impact factor: 2.373

Review 3.  Computational anatomy: shape, growth, and atrophy comparison via diffeomorphisms.

Authors:  Michael I Miller
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

4.  Particle-based shape analysis of multi-object complexes.

Authors:  Joshua Cates; P Thomas Fletcher; Martin Styner; Heather Cody Hazlett; Ross Whitaker
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

5.  Statistical shape analysis of neuroanatomical structures based on medial models.

Authors:  M Styner; G Gerig; J Lieberman; D Jones; D Weinberger
Journal:  Med Image Anal       Date:  2003-09       Impact factor: 8.545

Review 6.  Predictors of atrial fibrillation recurrence after radiofrequency catheter ablation: a systematic review.

Authors:  Ethan M Balk; Ann C Garlitski; Alawi A Alsheikh-Ali; Teruhiko Terasawa; Mei Chung; Stanley Ip
Journal:  J Cardiovasc Electrophysiol       Date:  2010-11

7.  Multiscale 3D shape representation and segmentation with applications to hippocampal/caudate extraction from brain MRI.

Authors:  Yi Gao; Benjamin Corn; Dan Schifter; Allen Tannenbaum
Journal:  Med Image Anal       Date:  2011-11-02       Impact factor: 8.545

8.  Toward a comprehensive framework for the spatiotemporal statistical analysis of longitudinal shape data.

Authors:  S Durrleman; X Pennec; A Trouvé; J Braga; G Gerig; N Ayache
Journal:  Int J Comput Vis       Date:  2013-05       Impact factor: 7.410

9.  Analysis of longitudinal shape variability via subject specific growth modeling.

Authors:  James Fishbaugh; Marcel Prastawa; Stanley Durrleman; Joseph Piven; Guido Gerig
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

10.  A linear optimal transportation framework for quantifying and visualizing variations in sets of images.

Authors:  Wei Wang; Dejan Slepčev; Saurav Basu; John A Ozolek; Gustavo K Rohde
Journal:  Int J Comput Vis       Date:  2013-01-01       Impact factor: 7.410

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  1 in total

1.  Evaluation of nucleus segmentation in digital pathology images through large scale image synthesis.

Authors:  Naiyun Zhou; Xiaxia Yu; Tianhao Zhao; Si Wen; Fusheng Wang; Wei Zhu; Tahsin Kurc; Allen Tannenbaum; Joel Saltz; Yi Gao
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-03-01
  1 in total

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