Literature DB >> 27344938

Longitudinal modeling of appearance and shape and its potential for clinical use.

Guido Gerig1, James Fishbaugh2, Neda Sadeghi3.   

Abstract

Clinical assessment routinely uses terms such as development, growth trajectory, degeneration, disease progression, recovery or prediction. This terminology inherently carries the aspect of dynamic processes, suggesting that single measurements in time and cross-sectional comparison may not sufficiently describe spatiotemporal changes. In view of medical imaging, such tasks encourage subject-specific longitudinal imaging. Whereas follow-up, monitoring and prediction are natural tasks in clinical diagnosis of disease progression and of assessment of therapeutic intervention, translation of methodologies for calculation of temporal profiles from longitudinal data to clinical routine still requires significant research and development efforts. Rapid advances in image acquisition technology with significantly reduced acquisition times and with increase of patient comfort favor repeated imaging over the observation period. In view of serial imaging ranging over multiple years, image acquisition faces the challenging issue of scanner standardization and calibration which is crucial for successful spatiotemporal analysis. Longitudinal 3D data, represented as 4D images, capture time-varying anatomy and function. Such data benefits from dedicated analysis methods and tools that make use of the inherent correlation and causality of repeated acquisitions of the same subject. Availability of such data spawned progress in the development of advanced 4D image analysis methodologies that carry the notion of linear and nonlinear regression, now applied to complex, high-dimensional data such as images, image-derived shapes and structures, or a combination thereof. This paper provides examples of recently developed analysis methodologies for 4D image data, primarily focusing on progress in areas of core expertise of the authors. These include spatiotemporal shape modeling and growth trajectories of white matter fiber tracts demonstrated with examples from ongoing longitudinal clinical neuroimaging studies such as analysis of early brain growth in subjects at risk for mental illness and neurodegeneration in Huntington's disease (HD). We will discuss broader aspects of current limitations and need for future research in view of data consistency and analysis methodologies.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Longitudinal imaging; Mixed-effects modeling; Shape analysis; Shape regression

Mesh:

Year:  2016        PMID: 27344938      PMCID: PMC5381523          DOI: 10.1016/j.media.2016.06.014

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  19 in total

1.  Brain development during childhood and adolescence: a longitudinal MRI study.

Authors:  J N Giedd; J Blumenthal; N O Jeffries; F X Castellanos; H Liu; A Zijdenbos; T Paus; A C Evans; J L Rapoport
Journal:  Nat Neurosci       Date:  1999-10       Impact factor: 24.884

2.  Assessment of reliability of multi-site neuroimaging via traveling phantom study.

Authors:  Sylvain Gouttard; Martin Styner; Marcel Prastawa; Joseph Piven; Guido Gerig
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

3.  Regional characterization of longitudinal DT-MRI to study white matter maturation of the early developing brain.

Authors:  Neda Sadeghi; Marcel Prastawa; P Thomas Fletcher; Jason Wolff; John H Gilmore; Guido Gerig
Journal:  Neuroimage       Date:  2012-12-09       Impact factor: 6.556

4.  Particle based shape regression of open surfaces with applications to developmental neuroimaging.

Authors:  Manasi Datar; Joshua Cates; P Thomas Fletcher; Sylvain Gouttard; Guido Gerig; Ross Whitaker
Journal:  Med Image Comput Comput Assist Interv       Date:  2009

5.  Quantitative tract-based white matter development from birth to age 2years.

Authors:  Xiujuan Geng; Sylvain Gouttard; Anuja Sharma; Hongbin Gu; Martin Styner; Weili Lin; Guido Gerig; John H Gilmore
Journal:  Neuroimage       Date:  2012-03-28       Impact factor: 6.556

6.  Mixed-Effects Shape Models for Estimating Longitudinal Changes in Anatomy.

Authors:  Manasi Datar; Prasanna Muralidharan; Abhishek Kumar; Sylvain Gouttard; Joseph Piven; Guido Gerig; Ross Whitaker; P Thomas Fletcher
Journal:  Spatiotemporal Image Anal Longitud Time Ser Image Data (2012)       Date:  2012-10

7.  Subject-specific prediction using nonlinear population modeling: application to early brain maturation from DTI.

Authors:  Neda Sadeghi; P Thomas Fletcher; Marcel Prastawa; John H Gilmore; Guido Gerig
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

8.  Predicting infant cortical surface development using a 4D varifold-based learning framework and local topography-based shape morphing.

Authors:  Islem Rekik; Gang Li; Weili Lin; Dinggang Shen
Journal:  Med Image Anal       Date:  2015-11-10       Impact factor: 8.545

9.  Analysis of longitudinal shape variability via subject specific growth modeling.

Authors:  James Fishbaugh; Marcel Prastawa; Stanley Durrleman; Joseph Piven; Guido Gerig
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

10.  Statistical analysis of longitudinal neuroimage data with Linear Mixed Effects models.

Authors:  Jorge L Bernal-Rusiel; Douglas N Greve; Martin Reuter; Bruce Fischl; Mert R Sabuncu
Journal:  Neuroimage       Date:  2012-10-30       Impact factor: 6.556

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  8 in total

1.  Hierarchical geodesic modeling on the diffusion orientation distribution function for longitudinal DW-MRI analysis.

Authors:  Heejong Kim; Sungmin Hong; Martin Styner; Joseph Piven; Kelly Botteron; Guido Gerig
Journal:  Med Image Comput Comput Assist Interv       Date:  2020-09-29

2.  3D Registration of mpMRI for Assessment of Prostate Cancer Focal Therapy.

Authors:  Clément Orczyk; Andrew B Rosenkrantz; Artem Mikheev; Arnauld Villers; Myriam Bernaudin; Samir S Taneja; Samuel Valable; Henry Rusinek
Journal:  Acad Radiol       Date:  2017-11-06       Impact factor: 3.173

3.  Nonparametric Aggregation of Geodesic Trends for Longitudinal Data Analysis.

Authors:  Kristen M Campbell; P Thomas Fletcher
Journal:  Shape Med Imaging (2018)       Date:  2018-11-23

4.  4D CONTINUOUS MEDIAL REPRESENTATION BY GEODESIC SHAPE REGRESSION.

Authors:  Sungmin Hong; James Fishbaugh; Guido Gerig
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2018-05-24

5.  Hierarchical Multi-Geodesic Model for Longitudinal Analysis of Temporal Trajectories of Anatomical Shape and Covariates.

Authors:  Sungmin Hong; James Fishbaugh; Jason J Wolff; Martin A Styner; Guido Gerig
Journal:  Med Image Comput Comput Assist Interv       Date:  2019-10-10

6.  Joint prediction of longitudinal development of cortical surfaces and white matter fibers from neonatal MRI.

Authors:  Islem Rekik; Gang Li; Pew-Thian Yap; Geng Chen; Weili Lin; Dinggang Shen
Journal:  Neuroimage       Date:  2017-03-09       Impact factor: 6.556

7.  Subject-Specific Longitudinal Shape Analysis by Coupling Spatiotemporal Shape Modeling with Medial Analysis.

Authors:  Sungmin Hong; James Fishbaugh; Morteza Rezanejad; Kaleem Siddiqi; Hans Johnson; Jane Paulsen; Eun Young Kim; Guido Gerig
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-04

8.  Association of longitudinal platelet count trajectory with ICU mortality: A multi-cohort study.

Authors:  Jiajin Chen; Xi Gao; Sipeng Shen; Jingyuan Xu; Zhe Sun; Ruilang Lin; Zhixiang Dai; Li Su; David C Christiani; Feng Chen; Ruyang Zhang; Yongyue Wei
Journal:  Front Immunol       Date:  2022-08-19       Impact factor: 8.786

  8 in total

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