Literature DB >> 21884801

A novel framework for longitudinal atlas construction with groupwise registration of subject image sequences.

Shu Liao1, Hongjun Jia, Guorong Wu, Dinggang Shen.   

Abstract

Longitudinal atlas construction plays an important role in medical image analysis. Given a set of longitudinal images from different subjects, the task of longitudinal atlas construction is to build an atlas sequence which can represent the trend of anatomical changes of the population. The major challenge for longitudinal atlas construction is how to effectively incorporate both the subject-specific information and population information to build the unbiased atlases. In this paper, a novel groupwise longitudinal atlas construction framework is proposed to address this challenge, and the main contributions of the proposed framework lie in the following aspects: (1) The subject-specific longitudinal information is captured by building the growth model for each subject. (2) The longitudinal atlas sequence is constructed by performing groupwise registration among all the subject image sequences, and only one transformation is needed to transform each subject's image sequence to the atlas space. The constructed longitudinal atlases are unbiased and no explicit template is assumed. (3) The proposed method is general, where the number of longitudinal images of each subject and the time points at which they are taken can be different. The proposed method is extensively evaluated on two longitudinal databases, namely the BLSA and ADNI databases, to construct the longitudinal atlas sequence. It is also compared with a state-of-the-art longitudinal atlas construction algorithm based on kernel regression on the temporal domain. Experimental results demonstrate that the proposed method consistently achieves higher registration accuracies and more consistent spatial-temporal correspondences than the compared method on both databases.
Copyright © 2011 Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Year:  2011        PMID: 21884801      PMCID: PMC3230771          DOI: 10.1016/j.neuroimage.2011.07.095

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  18 in total

1.  Segmentation of brain MR images through a hidden Markov random field model and the expectation-maximization algorithm.

Authors:  Y Zhang; M Brady; S Smith
Journal:  IEEE Trans Med Imaging       Date:  2001-01       Impact factor: 10.048

2.  Magnetic resonance image tissue classification using a partial volume model.

Authors:  D W Shattuck; S R Sandor-Leahy; K A Schaper; D A Rottenberg; R M Leahy
Journal:  Neuroimage       Date:  2001-05       Impact factor: 6.556

3.  CLASSIC: consistent longitudinal alignment and segmentation for serial image computing.

Authors:  Zhong Xue; Dinggang Shen; Christos Davatzikos
Journal:  Neuroimage       Date:  2005-11-04       Impact factor: 6.556

Review 4.  Computational anatomy: shape, growth, and atrophy comparison via diffeomorphisms.

Authors:  Michael I Miller
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

5.  Surface matching via currents.

Authors:  Marc Vaillant; Joan Glaunès
Journal:  Inf Process Med Imaging       Date:  2005

6.  Inferring brain variability from diffeomorphic deformations of currents: an integrative approach.

Authors:  Stanley Durrleman; Xavier Pennec; Alain Trouvé; Paul Thompson; Nicholas Ayache
Journal:  Med Image Anal       Date:  2008-06-21       Impact factor: 8.545

7.  A nonparametric method for automatic correction of intensity nonuniformity in MRI data.

Authors:  J G Sled; A P Zijdenbos; A C Evans
Journal:  IEEE Trans Med Imaging       Date:  1998-02       Impact factor: 10.048

8.  Unbiased diffeomorphic atlas construction for computational anatomy.

Authors:  S Joshi; Brad Davis; Matthieu Jomier; Guido Gerig
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

9.  The boundary shift integral: an accurate and robust measure of cerebral volume changes from registered repeat MRI.

Authors:  P A Freeborough; N C Fox
Journal:  IEEE Trans Med Imaging       Date:  1997-10       Impact factor: 10.048

10.  Progressive cerebral atrophy in MS: a serial study using registered, volumetric MRI.

Authors:  N C Fox; R Jenkins; S M Leary; V L Stevenson; N A Losseff; W R Crum; R J Harvey; M N Rossor; D H Miller; A J Thompson
Journal:  Neurology       Date:  2000-02-22       Impact factor: 9.910

View more
  14 in total

1.  Geodesic shape regression in the framework of currents.

Authors:  James Fishbaugh; Marcel Prastawa; Guido Gerig; Stanley Durrleman
Journal:  Inf Process Med Imaging       Date:  2013

2.  Geodesic image regression with a sparse parameterization of diffeomorphisms.

Authors:  James Fishbaugh; Marcel Prastawa; Guido Gerig; Stanley Durrleman
Journal:  Geom Sci Inf (2013)       Date:  2013

3.  A New Image Similarity Metric for Improving Deformation Consistency in Graph-Based Groupwise Image Registration.

Authors:  Zhenyu Tang; Pew-Thian Yap; Dinggang Shen
Journal:  IEEE Trans Biomed Eng       Date:  2018-12-06       Impact factor: 4.538

4.  A statistical framework for inter-group image registration.

Authors:  Shu Liao; Guorong Wu; Dinggang Shen
Journal:  Neuroinformatics       Date:  2012-10

5.  Deep ensemble learning of sparse regression models for brain disease diagnosis.

Authors:  Heung-Il Suk; Seong-Whan Lee; Dinggang Shen
Journal:  Med Image Anal       Date:  2017-01-24       Impact factor: 8.545

6.  Construction of 4D high-definition cortical surface atlases of infants: Methods and applications.

Authors:  Gang Li; Li Wang; Feng Shi; John H Gilmore; Weili Lin; Dinggang Shen
Journal:  Med Image Anal       Date:  2015-04-17       Impact factor: 8.545

7.  A Spatio-Temporal Atlas and Statistical Model of the Tongue During Speech from Cine-MRI.

Authors:  Jonghye Woo; Fangxu Xing; Junghoon Lee; Maureen Stone; Jerry L Prince
Journal:  Comput Methods Biomech Biomed Eng Imaging Vis       Date:  2016-04-28

8.  Analysis of longitudinal shape variability via subject specific growth modeling.

Authors:  James Fishbaugh; Marcel Prastawa; Stanley Durrleman; Joseph Piven; Guido Gerig
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

9.  Construction of An Unbiased Spatio-Temporal Atlas of the Tongue During Speech.

Authors:  Jonghye Woo; Fangxu Xing; Junghoon Lee; Maureen Stone; Jerry L Prince
Journal:  Inf Process Med Imaging       Date:  2015

10.  Spatio-Temporal Regularization for Longitudinal Registration to Subject-Specific 3d Template.

Authors:  Nicolas Guizard; Vladimir S Fonov; Daniel García-Lorenzo; Kunio Nakamura; Bérengère Aubert-Broche; D Louis Collins
Journal:  PLoS One       Date:  2015-08-24       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.