Literature DB >> 12117763

On the metrics and euler-lagrange equations of computational anatomy.

Michael I Miller1, Alain Trouve, Laurent Younes.   

Abstract

This paper reviews literature, current concepts and approaches in computational anatomy (CA). The model of CA is a Grenander deformable template, an orbit generated from a template under groups of diffeomorphisms. The metric space of all anatomical images is constructed from the geodesic connecting one anatomical structure to another in the orbit. The variational problems specifying these metrics are reviewed along with their associated Euler-Lagrange equations. The Euler equations of motion derived by Arnold for the geodesics in the group of divergence-free volume-preserving diffeomorphisms of incompressible fluids are generalized for the larger group of diffeomorphisms used in CA with nonconstant Jacobians. Metrics that accommodate photometric variation are described extending the anatomical model to incorporate the construction of neoplasm. Metrics on landmarked shapes are reviewed as well as Joshi's diffeomorphism metrics, Bookstein's thin-plate spline approximate-metrics, and Kendall's affine invariant metrics. We conclude by showing recent experimental results from the Toga & Thompson group in growth, the Van Essen group in macaque and human cortex mapping, and the Csernansky group in hippocampus mapping for neuropsychiatric studies in aging and schizophrenia.

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Year:  2002        PMID: 12117763     DOI: 10.1146/annurev.bioeng.4.092101.125733

Source DB:  PubMed          Journal:  Annu Rev Biomed Eng        ISSN: 1523-9829            Impact factor:   9.590


  99 in total

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Authors:  M Tittgemeyer; D Y von Cramon
Journal:  Nervenarzt       Date:  2004-12       Impact factor: 1.214

2.  Estimation of smooth growth trajectories with controlled acceleration from time series shape data.

Authors:  James Fishbaugh; Stanley Durrleman; Guido Gerig
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

3.  Geodesic Shooting for Computational Anatomy.

Authors:  Michael I Miller; Alain Trouvé; Laurent Younes
Journal:  J Math Imaging Vis       Date:  2006-01-31       Impact factor: 1.627

4.  Structural Development of Human Fetal and Preterm Brain Cortical Plate Based on Population-Averaged Templates.

Authors:  Qiaowen Yu; Austin Ouyang; Lina Chalak; Tina Jeon; Jonathan Chia; Virendra Mishra; Muraleedharan Sivarajan; Greg Jackson; Nancy Rollins; Shuwei Liu; Hao Huang
Journal:  Cereb Cortex       Date:  2016-10-17       Impact factor: 5.357

5.  Population-averaged macaque brain atlas with high-resolution ex vivo DTI integrated into in vivo space.

Authors:  Lei Feng; Tina Jeon; Qiaowen Yu; Minhui Ouyang; Qinmu Peng; Virendra Mishra; Mihovil Pletikos; Nenad Sestan; Michael I Miller; Susumu Mori; Steven Hsiao; Shuwei Liu; Hao Huang
Journal:  Brain Struct Funct       Date:  2017-06-20       Impact factor: 3.270

6.  Computational cardiac anatomy using MRI.

Authors:  Mirza Faisal Beg; Patrick A Helm; Elliot McVeigh; Michael I Miller; Raimond L Winslow
Journal:  Magn Reson Med       Date:  2004-11       Impact factor: 4.668

7.  Increasing the power of functional maps of the medial temporal lobe by using large deformation diffeomorphic metric mapping.

Authors:  Michael I Miller; M Faisal Beg; Can Ceritoglu; Craig Stark
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-24       Impact factor: 11.205

8.  Structural consequences of diffuse traumatic brain injury: a large deformation tensor-based morphometry study.

Authors:  Junghoon Kim; Brian Avants; Sunil Patel; John Whyte; Branch H Coslett; John Pluta; John A Detre; James C Gee
Journal:  Neuroimage       Date:  2007-10-13       Impact factor: 6.556

9.  Feasibility of creating a high-resolution 3D diffusion tensor imaging based atlas of the human brainstem: a case study at 11.7 T.

Authors:  Manisha Aggarwal; Jiangyang Zhang; Olga Pletnikova; Barbara Crain; Juan Troncoso; Susumu Mori
Journal:  Neuroimage       Date:  2013-02-04       Impact factor: 6.556

10.  Landmark-referenced voxel-based analysis of diffusion tensor images of the brainstem white matter tracts: application in patients with middle cerebral artery stroke.

Authors:  Weihong Zhang; Xin Li; Jiangyang Zhang; Andreas Luft; Daniel F Hanley; Peter van Zijl; Michael I Miller; Laurent Younes; Susumu Mori
Journal:  Neuroimage       Date:  2008-09-25       Impact factor: 6.556

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