Literature DB >> 22568612

Bayesian meta-analysis of the accuracy of a test for tuberculous pleuritis in the absence of a gold standard reference.

Nandini Dendukuri1, Ian Schiller, Lawrence Joseph, Madhukar Pai.   

Abstract

Absence of a perfect reference test is an acknowledged source of bias in diagnostic studies. In the case of tuberculous pleuritis, standard reference tests such as smear microscopy, culture and biopsy have poor sensitivity. Yet meta-analyses of new tests for this disease have always assumed the reference standard is perfect, leading to biased estimates of the new test's accuracy. We describe a method for joint meta-analysis of sensitivity and specificity of the diagnostic test under evaluation, while considering the imperfect nature of the reference standard. We use a Bayesian hierarchical model that takes into account within- and between-study variability. We show how to obtain pooled estimates of sensitivity and specificity, and how to plot a hierarchical summary receiver operating characteristic curve. We describe extensions of the model to situations where multiple reference tests are used, and where index and reference tests are conditionally dependent. The performance of the model is evaluated using simulations and illustrated using data from a meta-analysis of nucleic acid amplification tests (NAATs) for tuberculous pleuritis. The estimate of NAAT specificity was higher and the sensitivity lower compared to a model that assumed that the reference test was perfect.
© 2012, The International Biometric Society.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22568612      PMCID: PMC3728030          DOI: 10.1111/j.1541-0420.2012.01773.x

Source DB:  PubMed          Journal:  Biometrics        ISSN: 0006-341X            Impact factor:   2.571


  21 in total

1.  Meta-analysis of diagnostic tests with imperfect reference standards.

Authors:  S D Walter; L Irwig; P P Glasziou
Journal:  J Clin Epidemiol       Date:  1999-10       Impact factor: 6.437

2.  Bayesian approaches to modeling the conditional dependence between multiple diagnostic tests.

Authors:  N Dendukuri; L Joseph
Journal:  Biometrics       Date:  2001-03       Impact factor: 2.571

3.  Modeling conditional dependence between diagnostic tests: a multiple latent variable model.

Authors:  Nandini Dendukuri; Alula Hadgu; Liangliang Wang
Journal:  Stat Med       Date:  2009-02-01       Impact factor: 2.373

4.  Bivariate random effects meta-analysis of ROC curves.

Authors:  L R Arends; T H Hamza; J C van Houwelingen; M H Heijenbrok-Kal; M G M Hunink; T Stijnen
Journal:  Med Decis Making       Date:  2008-06-30       Impact factor: 2.583

5.  Random Effects Models in a Meta-Analysis of the Accuracy of Two Diagnostic Tests Without a Gold Standard.

Authors:  Haitao Chu; Sining Chen; Thomas A Louis
Journal:  J Am Stat Assoc       Date:  2009-06-01       Impact factor: 5.033

Review 6.  New and improved tuberculosis diagnostics: evidence, policy, practice, and impact.

Authors:  Madhukar Pai; Jessica Minion; Karen Steingart; Andrew Ramsay
Journal:  Curr Opin Pulm Med       Date:  2010-05       Impact factor: 3.155

Review 7.  Estimation of test error rates, disease prevalence and relative risk from misclassified data: a review.

Authors:  S D Walter; L M Irwig
Journal:  J Clin Epidemiol       Date:  1988       Impact factor: 6.437

8.  Combining independent studies of a diagnostic test into a summary ROC curve: data-analytic approaches and some additional considerations.

Authors:  L E Moses; D Shapiro; B Littenberg
Journal:  Stat Med       Date:  1993-07-30       Impact factor: 2.373

9.  Tuberculous pleural effusion. Twenty-year experience.

Authors:  A F Seibert; J Haynes; R Middleton; J B Bass
Journal:  Chest       Date:  1991-04       Impact factor: 9.410

Review 10.  Nucleic acid amplification tests in the diagnosis of tuberculous pleuritis: a systematic review and meta-analysis.

Authors:  Madhukar Pai; Laura L Flores; Alan Hubbard; Lee W Riley; John M Colford
Journal:  BMC Infect Dis       Date:  2004-02-23       Impact factor: 3.090

View more
  35 in total

1.  Meta-analysis of studies with bivariate binary outcomes: a marginal beta-binomial model approach.

Authors:  Yong Chen; Chuan Hong; Yang Ning; Xiao Su
Journal:  Stat Med       Date:  2015-08-24       Impact factor: 2.373

Review 2.  Accuracy of Rapid Point-of-Care Diagnostic Tests for Hepatitis B Surface Antigen-A Systematic Review and Meta-analysis.

Authors:  Mehnaaz S Khuroo; Naira S Khuroo; Mohammad S Khuroo
Journal:  J Clin Exp Hepatol       Date:  2014-08-28

Review 3.  Circulating antigen tests and urine reagent strips for diagnosis of active schistosomiasis in endemic areas.

Authors:  Eleanor A Ochodo; Gowri Gopalakrishna; Bea Spek; Johannes B Reitsma; Lisette van Lieshout; Katja Polman; Poppy Lamberton; Patrick M M Bossuyt; Mariska M G Leeflang
Journal:  Cochrane Database Syst Rev       Date:  2015-03-11

4.  A Bayesian hierarchical model for network meta-analysis of multiple diagnostic tests.

Authors:  Xiaoye Ma; Qinshu Lian; Haitao Chu; Joseph G Ibrahim; Yong Chen
Journal:  Biostatistics       Date:  2018-01-01       Impact factor: 5.899

Review 5.  Statistical methods for multivariate meta-analysis of diagnostic tests: An overview and tutorial.

Authors:  Xiaoye Ma; Lei Nie; Stephen R Cole; Haitao Chu
Journal:  Stat Methods Med Res       Date:  2013-06-26       Impact factor: 3.021

6.  Copas-like selection model to correct publication bias in systematic review of diagnostic test studies.

Authors:  Jin Piao; Yulun Liu; Yong Chen; Jing Ning
Journal:  Stat Methods Med Res       Date:  2018-07-31       Impact factor: 3.021

7.  A Bayesian Hierarchical Summary Receiver Operating Characteristic Model for Network Meta-analysis of Diagnostic Tests.

Authors:  Qinshu Lian; James S Hodges; Haitao Chu
Journal:  J Am Stat Assoc       Date:  2018-08-07       Impact factor: 5.033

8.  Global identifiability of latent class models with applications to diagnostic test accuracy studies: A Gröbner basis approach.

Authors:  Rui Duan; Ming Cao; Yang Ning; Mingfu Zhu; Bin Zhang; Aidan McDermott; Haitao Chu; Xiaohua Zhou; Jason H Moore; Joseph G Ibrahim; Daniel O Scharfstein; Yong Chen
Journal:  Biometrics       Date:  2019-11-06       Impact factor: 2.571

Review 9.  Xpert® MTB/RIF assay for extrapulmonary tuberculosis and rifampicin resistance.

Authors:  Mikashmi Kohli; Ian Schiller; Nandini Dendukuri; Keertan Dheda; Claudia M Denkinger; Samuel G Schumacher; Karen R Steingart
Journal:  Cochrane Database Syst Rev       Date:  2018-08-27

Review 10.  Summary diagnostic validity of commonly used maternal major depression disorder case finding instruments in the United States: A meta-analysis.

Authors:  Arthur H Owora; Hélène Carabin; Jessica Reese; Tabitha Garwe
Journal:  J Affect Disord       Date:  2016-08-16       Impact factor: 4.839

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.