Literature DB >> 22259406

1-Benzoyl-3-(2,4,5-trichloro-phen-yl)thio-urea.

M Khawar Rauf, Masahiro Ebihara, Amin Badshah.   

Abstract

The benzene and phenyl rings in the title compound, C(14)H(9)Cl(3)N(2)OS, form a dihedral angle of 40.98 (6)°. The mol-ecule exists in the thione form with typical thio-urea C-S [1.666 (2) Å] and C-O [1.227 (3) Å] bond lengths as well as shortened C-N bonds [1.345 (3) and 1.386 (2) Å]. An intra-molecular N-H⋯O hydrogen bond stabilizes the mol-ecular conformation. In the crystal, pairs of N-H⋯S hydrogen bonds link the mol-ecules into centrosymmetric dimers.

Entities:  

Year:  2011        PMID: 22259406      PMCID: PMC3254466          DOI: 10.1107/S1600536811052780

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For information on thio­urea derivatives, see: Patil & Chedekel (1984 ▶); Baily et al. (1996 ▶); Namgun et al. (2001 ▶); Koch (2001 ▶); Wegner et al. (1986 ▶); Krishnamurthy et al. (1999 ▶); Murtaza et al. (2009a ▶,b ▶). For related structures, see: Khawar Rauf et al. (2009a ▶,b ▶). For bond-length data, see: Allen et al. (1987 ▶). For a description of the Cambridge Structural Database, see: Allen (2002 ▶).

Experimental

Crystal data

C14H9Cl3N2OS M = 359.64 Monoclinic, a = 33.111 (8) Å b = 3.8413 (7) Å c = 25.220 (6) Å β = 115.995 (2)° V = 2883.1 (11) Å3 Z = 8 Mo Kα radiation μ = 0.78 mm−1 T = 296 K 0.20 × 0.20 × 0.20 mm

Data collection

Rigaku/MSC Mercury CCD diffractometer Absorption correction: multi-scan (REQAB; Rigaku, 1998 ▶) T min = 0.800, T max = 1.000 11264 measured reflections 3264 independent reflections 2686 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.084 S = 1.06 3264 reflections 190 parameters H-atom parameters constrained Δρmax = 0.42 e Å−3 Δρmin = −0.39 e Å−3 Data collection: CrystalClear (Molecular Structure Corporation and Rigaku, 2001 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPII (Johnson, 1976 ▶) and TEXSAN (Molecular Structure Corporation and Rigaku, 2004 ▶); software used to prepare material for publication: Yadokari-XG_2009 (Kabuto et al., 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811052780/bg2439sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811052780/bg2439Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811052780/bg2439Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H9Cl3N2OSF(000) = 1456
Mr = 359.64Dx = 1.657 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71070 Å
Hall symbol: -C 2ycCell parameters from 3588 reflections
a = 33.111 (8) Åθ = 3.4–27.5°
b = 3.8413 (7) ŵ = 0.78 mm1
c = 25.220 (6) ÅT = 296 K
β = 115.995 (2)°Prism, colorless
V = 2883.1 (11) Å30.20 × 0.20 × 0.20 mm
Z = 8
Rigaku/MSC Mercury CCD diffractometer3264 independent reflections
Radiation source: Sealed Tube2686 reflections with I > 2σ(I)
Graphite MonochromatorRint = 0.039
Detector resolution: 14.6306 pixels mm-1θmax = 27.5°, θmin = 3.2°
dtprofit.ref scansh = −42→31
Absorption correction: multi-scan (REQAB; Rigaku, 1998)k = −3→4
Tmin = 0.800, Tmax = 1.000l = −28→32
11264 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.084H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0345P)2 + 0.4746P] where P = (Fo2 + 2Fc2)/3
3264 reflections(Δ/σ)max = 0.001
190 parametersΔρmax = 0.42 e Å3
0 restraintsΔρmin = −0.39 e Å3
Experimental. ????
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.43321 (7)0.2438 (4)0.27137 (9)0.0156 (4)
S10.435250 (18)0.44890 (12)0.21438 (2)0.01721 (13)
N10.39554 (6)0.1658 (4)0.27661 (7)0.0169 (4)
H10.39850.07850.30950.020*
N20.47294 (6)0.1480 (4)0.31893 (7)0.0161 (4)
H20.49730.20180.31660.019*
C20.47806 (7)−0.0243 (5)0.36979 (9)0.0183 (4)
O10.44567 (5)−0.0919 (4)0.37941 (7)0.0262 (4)
C30.35153 (7)0.2166 (5)0.23204 (9)0.0159 (4)
C40.31883 (7)0.3736 (5)0.24474 (9)0.0169 (4)
C50.27552 (7)0.4225 (4)0.20171 (10)0.0183 (5)
H50.25420.52740.21100.022*
C60.26409 (7)0.3141 (5)0.14447 (9)0.0175 (4)
C70.29612 (7)0.1512 (5)0.13109 (9)0.0170 (4)
C80.33904 (7)0.0996 (4)0.17480 (9)0.0157 (4)
H80.3600−0.01540.16580.019*
Cl10.332696 (18)0.51597 (12)0.31608 (2)0.02171 (14)
Cl20.210441 (17)0.39364 (12)0.09054 (2)0.02358 (14)
Cl30.283000 (19)0.00640 (12)0.06075 (2)0.02230 (14)
C90.52450 (7)−0.1244 (4)0.41257 (9)0.0160 (4)
C100.56177 (7)−0.1060 (5)0.40132 (10)0.0202 (5)
H100.5589−0.02090.36530.024*
C110.60327 (7)−0.2139 (5)0.44354 (10)0.0262 (5)
H110.6282−0.20270.43560.031*
C120.60807 (7)−0.3382 (5)0.49742 (10)0.0236 (5)
H120.6361−0.41000.52570.028*
C130.57106 (8)−0.3556 (5)0.50921 (10)0.0278 (5)
H130.5741−0.43750.54550.033*
C140.52959 (8)−0.2506 (5)0.46687 (10)0.0250 (5)
H140.5047−0.26440.47470.030*
U11U22U33U12U13U23
C10.0159 (11)0.0153 (9)0.0139 (11)0.0006 (7)0.0050 (9)−0.0028 (7)
S10.0155 (3)0.0206 (2)0.0151 (3)0.00181 (18)0.0063 (2)0.00292 (18)
N10.0143 (9)0.0239 (8)0.0117 (9)0.0017 (6)0.0048 (8)0.0036 (7)
N20.0117 (9)0.0228 (8)0.0127 (9)0.0001 (6)0.0042 (8)0.0017 (6)
C20.0181 (12)0.0218 (10)0.0136 (11)0.0013 (8)0.0058 (10)0.0001 (8)
O10.0157 (9)0.0441 (9)0.0203 (9)0.0027 (6)0.0093 (8)0.0103 (7)
C30.0135 (11)0.0174 (9)0.0143 (11)−0.0006 (7)0.0037 (9)0.0029 (7)
C40.0176 (12)0.0175 (9)0.0162 (11)−0.0011 (7)0.0080 (10)0.0005 (7)
C50.0143 (11)0.0184 (9)0.0237 (13)0.0005 (7)0.0096 (10)0.0022 (8)
C60.0108 (11)0.0175 (9)0.0201 (12)−0.0010 (7)0.0031 (9)0.0052 (8)
C70.0180 (11)0.0170 (9)0.0142 (11)−0.0017 (7)0.0054 (9)0.0007 (7)
C80.0143 (11)0.0161 (9)0.0174 (11)0.0009 (7)0.0076 (9)0.0011 (8)
Cl10.0205 (3)0.0287 (3)0.0170 (3)0.00048 (19)0.0092 (2)−0.00330 (19)
Cl20.0140 (3)0.0281 (3)0.0231 (3)0.00175 (19)0.0030 (2)0.0041 (2)
Cl30.0202 (3)0.0295 (3)0.0133 (3)−0.00027 (19)0.0038 (2)−0.00146 (19)
C90.0144 (11)0.0167 (9)0.0138 (11)0.0013 (7)0.0033 (9)−0.0008 (7)
C100.0217 (12)0.0211 (10)0.0182 (12)0.0011 (8)0.0091 (10)0.0033 (8)
C110.0178 (12)0.0298 (11)0.0301 (14)0.0022 (9)0.0097 (11)0.0056 (9)
C120.0176 (12)0.0218 (10)0.0213 (13)0.0016 (8)−0.0007 (10)0.0033 (8)
C130.0291 (14)0.0337 (12)0.0168 (13)0.0025 (9)0.0066 (11)0.0055 (9)
C140.0193 (13)0.0349 (11)0.0214 (13)0.0032 (9)0.0093 (11)0.0054 (9)
C1—N11.345 (3)C6—Cl21.727 (2)
C1—N21.386 (2)C7—C81.379 (3)
C1—S11.666 (2)C7—Cl31.723 (2)
N1—C31.410 (2)C8—H80.9300
N1—H10.8600C9—C101.384 (3)
N2—C21.386 (3)C9—C141.391 (3)
N2—H20.8600C10—C111.382 (3)
C2—O11.227 (3)C10—H100.9300
C2—C91.491 (3)C11—C121.382 (3)
C3—C81.391 (3)C11—H110.9300
C3—C41.394 (3)C12—C131.383 (3)
C4—C51.380 (3)C12—H120.9300
C4—Cl11.739 (2)C13—C141.379 (3)
C5—C61.386 (3)C13—H130.9300
C5—H50.9300C14—H140.9300
C6—C71.394 (3)
N1—C1—N2115.16 (18)C8—C7—C6119.9 (2)
N1—C1—S1125.47 (16)C8—C7—Cl3118.89 (16)
N2—C1—S1119.36 (15)C6—C7—Cl3121.24 (17)
C1—N1—C3124.74 (18)C7—C8—C3121.12 (19)
C1—N1—H1117.6C7—C8—H8119.4
C3—N1—H1117.6C3—C8—H8119.4
C2—N2—C1127.76 (18)C10—C9—C14119.02 (19)
C2—N2—H2116.1C10—C9—C2124.6 (2)
C1—N2—H2116.1C14—C9—C2116.36 (19)
O1—C2—N2121.4 (2)C11—C10—C9120.1 (2)
O1—C2—C9121.06 (19)C11—C10—H10119.9
N2—C2—C9117.51 (18)C9—C10—H10119.9
C8—C3—C4118.10 (19)C12—C11—C10120.5 (2)
C8—C3—N1121.05 (18)C12—C11—H11119.7
C4—C3—N1120.81 (19)C10—C11—H11119.7
C5—C4—C3121.5 (2)C11—C12—C13119.8 (2)
C5—C4—Cl1118.90 (16)C11—C12—H12120.1
C3—C4—Cl1119.63 (16)C13—C12—H12120.1
C4—C5—C6119.57 (19)C14—C13—C12119.6 (2)
C4—C5—H5120.2C14—C13—H13120.2
C6—C5—H5120.2C12—C13—H13120.2
C5—C6—C7119.82 (19)C13—C14—C9120.9 (2)
C5—C6—Cl2118.96 (16)C13—C14—H14119.5
C7—C6—Cl2121.20 (17)C9—C14—H14119.5
N2—C1—N1—C3−175.25 (16)C5—C6—C7—Cl3178.95 (14)
S1—C1—N1—C36.3 (3)Cl2—C6—C7—Cl3−2.6 (2)
N1—C1—N2—C21.7 (3)C6—C7—C8—C3−1.9 (3)
S1—C1—N2—C2−179.68 (15)Cl3—C7—C8—C3178.94 (14)
C1—N2—C2—O1−5.0 (3)C4—C3—C8—C72.9 (3)
C1—N2—C2—C9175.03 (17)N1—C3—C8—C7−179.55 (16)
C1—N1—C3—C849.5 (3)O1—C2—C9—C10169.75 (18)
C1—N1—C3—C4−133.0 (2)N2—C2—C9—C10−10.3 (3)
C8—C3—C4—C5−1.9 (3)O1—C2—C9—C14−9.0 (3)
N1—C3—C4—C5−179.45 (17)N2—C2—C9—C14170.96 (17)
C8—C3—C4—Cl1178.74 (14)C14—C9—C10—C110.4 (3)
N1—C3—C4—Cl11.2 (2)C2—C9—C10—C11−178.33 (18)
C3—C4—C5—C6−0.1 (3)C9—C10—C11—C12−0.5 (3)
Cl1—C4—C5—C6179.25 (14)C10—C11—C12—C130.1 (3)
C4—C5—C6—C71.2 (3)C11—C12—C13—C140.4 (3)
C4—C5—C6—Cl2−177.30 (14)C12—C13—C14—C9−0.6 (3)
C5—C6—C7—C8−0.2 (3)C10—C9—C14—C130.2 (3)
Cl2—C6—C7—C8178.26 (14)C2—C9—C14—C13178.98 (19)
D—H···AD—HH···AD···AD—H···A
N1—H1···O10.861.892.586 (2)137.
N2—H2···S1i0.862.833.6771 (19)168.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O10.861.892.586 (2)137
N2—H2⋯S1i0.862.833.6771 (19)168

Symmetry code: (i) .

  6 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  2-Benzoyl-1-(2,4-dichloro-phen-yl)-3-phenyl-guanidine.

Authors:  Ghulam Murtaza; Masahiro Ebihara; Muhammad Said; M Khawar Rauf; Saeed Anwar
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-29

4.  2-Benzoyl-1,1-diethyl-3-phenyl-guanidine.

Authors:  Ghulam Murtaza; M Khawar Rauf; Masahiro Ebihara; Amin Badshah
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-17

5.  1-(2,6-Dichloro-benzo-yl)-3-(3,5-dichloro-phen-yl)thio-urea.

Authors:  M Khawar Rauf; Michael Bolte; Amin Badshah
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-12-20

6.  1-(3-Chloro-benzo-yl)-3-(2,3-dimethyl-phen-yl)thio-urea.

Authors:  M Khawar Rauf; Michael Bolte; Amin Badshah
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-08
  6 in total
  5 in total

1.  Crystal structure of N-(propan-2-yl-carbamo-thio-yl)benzamide.

Authors:  Jerry P Jasinski; Mehmet Akkurt; Shaaban K Mohamed; Mohamed A Gad; Mustafa R Albayati
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-01-01

2.  1-(2-Chloro-benzo-yl)-3-(2,3-dimethyl-phen-yl)thio-urea.

Authors:  M Khawar Rauf; Masahiro Ebihara; Amin Badshah
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-11-30

3.  1-(2-Chloro-benzo-yl)-3-(pyrimidin-2-yl)thio-urea.

Authors:  M Khawar Rauf; Samad Yaseen; Masahiro Ebihara; Amin Badshah
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-12-15

4.  1-(2-Chloro-benzo-yl)-3-(2-trifluoro-methyl-phen-yl)thio-urea.

Authors:  M Khawar Rauf; Masahiro Ebihara; Amin Badshah
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-12-05

5.  Crystal structure of 1-benzoyl-3-(4-fluoro-phen-yl)thio-urea.

Authors:  Rabab Sharaf Jassas; Abdullah M Asiri; Muhammad Nadeem Arshad; Mohie E M Zayed; Ghulam Mustafa
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-08-16
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.