Literature DB >> 21581857

1-(3-Chloro-benzo-yl)-3-(2,3-dimethyl-phen-yl)thio-urea.

M Khawar Rauf, Michael Bolte, Amin Badshah.   

Abstract

The title mol-ecule, C(16)H(15)ClN(2)OS, exists in the solid state in its thione form with typical thio-urea C-S and C-O bonds lengths, as well as shortened C-N bonds. An intra-molecular N-H⋯O hydrogen bond stabilizes the mol-ecular conformation and inter-molecular N-H⋯S hydrogen bonds link the mol-ecules into centrosymmetric dimers. The dihedral angle between the aromatic rings is 50.18 (5)°.

Entities:  

Year:  2009        PMID: 21581857      PMCID: PMC2968148          DOI: 10.1107/S1600536809000063

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related compounds, see: Khawar Rauf et al. (2006a ▶,b ▶,c ▶,d ▶). For reference bond-length data, see: Allen (2002 ▶).

Experimental

Crystal data

C16H15ClN2OS M = 318.81 Triclinic, a = 8.1315 (9) Å b = 9.3906 (12) Å c = 10.5310 (12) Å α = 93.296 (8)° β = 92.623 (8)° γ = 102.579 (9)° V = 782.14 (16) Å3 Z = 2 Mo Kα radiation μ = 0.38 mm−1 T = 173 (2) K 0.46 × 0.42 × 0.41 mm

Data collection

Stoe IPDS II two-circle diffractometer Absorption correction: multi-scan (MULABS; Spek, 2003 ▶; Blessing, 1995 ▶) T min = 0.846, T max = 0.861 8257 measured reflections 3066 independent reflections 2846 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.085 S = 1.04 3066 reflections 201 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.27 e Å−3 Δρmin = −0.33 e Å−3 Data collection: X-AREA (Stoe & Cie, 2001 ▶); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL-Plus (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809000063/bv2114sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809000063/bv2114Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H15ClN2OSZ = 2
Mr = 318.81F(000) = 332
Triclinic, P1Dx = 1.354 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.1315 (9) ÅCell parameters from 7706 reflections
b = 9.3906 (12) Åθ = 3.7–26.1°
c = 10.5310 (12) ŵ = 0.38 mm1
α = 93.296 (8)°T = 173 K
β = 92.623 (8)°Block, colourless
γ = 102.579 (9)°0.46 × 0.42 × 0.41 mm
V = 782.14 (16) Å3
Stoe IPDS II two-circle diffractometer3066 independent reflections
Radiation source: fine-focus sealed tube2846 reflections with I > 2σ(I)
graphiteRint = 0.037
ω scansθmax = 26.1°, θmin = 3.6°
Absorption correction: multi-scan (MULABS; Spek, 2003; Blessing, 1995)h = −10→10
Tmin = 0.846, Tmax = 0.861k = −10→11
8257 measured reflectionsl = −12→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.032H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.085w = 1/[σ2(Fo2) + (0.041P)2 + 0.3782P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max < 0.001
3066 reflectionsΔρmax = 0.27 e Å3
201 parametersΔρmin = −0.32 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.097 (5)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.23509 (5)0.60717 (4)0.59551 (4)0.02881 (14)
Cl1−0.24623 (5)−0.05881 (5)0.30214 (4)0.03438 (14)
O1−0.01441 (13)0.25159 (11)0.84778 (9)0.0258 (2)
N10.03004 (15)0.36655 (13)0.66166 (11)0.0201 (3)
H1−0.014 (2)0.3701 (19)0.5889 (18)0.025 (4)*
N20.24161 (15)0.47809 (13)0.81460 (11)0.0215 (3)
H20.192 (2)0.412 (2)0.8612 (19)0.034 (5)*
C1−0.04406 (17)0.25179 (15)0.73206 (13)0.0192 (3)
C20.16893 (17)0.48027 (14)0.69839 (13)0.0190 (3)
C11−0.16148 (16)0.12650 (14)0.65810 (13)0.0190 (3)
C12−0.15027 (17)0.09819 (15)0.52694 (13)0.0203 (3)
H12−0.07030.16120.48090.024*
C13−0.25894 (18)−0.02426 (15)0.46557 (14)0.0232 (3)
C14−0.37636 (19)−0.11864 (16)0.53128 (16)0.0280 (3)
H14−0.4495−0.20150.48770.034*
C15−0.38527 (18)−0.09009 (16)0.66142 (16)0.0280 (3)
H15−0.4650−0.15380.70710.034*
C16−0.27787 (18)0.03152 (16)0.72518 (14)0.0238 (3)
H16−0.28370.04990.81430.029*
C210.39206 (17)0.58278 (15)0.86417 (13)0.0194 (3)
C220.55031 (18)0.56849 (15)0.82648 (13)0.0213 (3)
C230.69413 (18)0.67134 (16)0.88045 (14)0.0240 (3)
C240.67324 (19)0.78059 (16)0.96980 (14)0.0255 (3)
H240.77010.84861.00660.031*
C250.5146 (2)0.79247 (17)1.00630 (14)0.0280 (3)
H250.50340.86791.06710.034*
C260.37181 (18)0.69272 (16)0.95296 (14)0.0243 (3)
H260.26240.69960.97680.029*
C270.5701 (2)0.44874 (18)0.73006 (16)0.0325 (4)
H27A0.46500.37360.71990.049*
H27B0.66250.40490.75980.049*
H27C0.59560.49010.64800.049*
C280.8687 (2)0.6643 (2)0.84115 (18)0.0412 (4)
H28A0.95130.74790.88230.062*
H28B0.87200.66710.74840.062*
H28C0.89610.57320.86720.062*
U11U22U33U12U13U23
S10.0257 (2)0.0279 (2)0.0257 (2)−0.00979 (15)−0.00909 (14)0.01144 (15)
Cl10.0333 (2)0.0398 (2)0.0276 (2)0.00868 (17)−0.00649 (16)−0.01303 (16)
O10.0274 (5)0.0271 (5)0.0184 (5)−0.0040 (4)−0.0013 (4)0.0031 (4)
N10.0201 (6)0.0193 (6)0.0172 (6)−0.0028 (4)−0.0054 (5)0.0021 (4)
N20.0202 (6)0.0212 (6)0.0188 (6)−0.0040 (5)−0.0040 (5)0.0030 (5)
C10.0175 (6)0.0190 (6)0.0199 (7)0.0015 (5)0.0001 (5)0.0016 (5)
C20.0171 (6)0.0180 (6)0.0201 (7)0.0008 (5)−0.0019 (5)0.0007 (5)
C110.0159 (6)0.0166 (6)0.0234 (7)0.0020 (5)−0.0026 (5)0.0019 (5)
C120.0179 (6)0.0182 (6)0.0238 (7)0.0026 (5)−0.0021 (5)0.0008 (5)
C130.0227 (7)0.0216 (7)0.0253 (7)0.0078 (5)−0.0061 (6)−0.0046 (6)
C140.0222 (7)0.0184 (7)0.0395 (9)−0.0007 (5)−0.0090 (6)−0.0025 (6)
C150.0215 (7)0.0211 (7)0.0384 (9)−0.0023 (6)−0.0023 (6)0.0078 (6)
C160.0215 (7)0.0226 (7)0.0255 (7)0.0009 (5)−0.0006 (6)0.0046 (6)
C210.0206 (7)0.0189 (6)0.0163 (6)0.0002 (5)−0.0050 (5)0.0023 (5)
C220.0236 (7)0.0211 (7)0.0184 (7)0.0041 (5)−0.0029 (5)0.0011 (5)
C230.0204 (7)0.0285 (7)0.0220 (7)0.0032 (6)−0.0033 (5)0.0038 (6)
C240.0235 (7)0.0249 (7)0.0240 (7)−0.0014 (6)−0.0084 (6)0.0014 (6)
C250.0321 (8)0.0252 (7)0.0245 (7)0.0056 (6)−0.0055 (6)−0.0073 (6)
C260.0206 (7)0.0286 (7)0.0229 (7)0.0053 (6)−0.0018 (5)−0.0021 (6)
C270.0316 (8)0.0343 (8)0.0311 (8)0.0092 (7)0.0010 (6)−0.0083 (7)
C280.0225 (8)0.0568 (11)0.0410 (10)0.0047 (7)−0.0002 (7)−0.0057 (8)
S1—C21.6751 (14)C16—H160.9500
Cl1—C131.7450 (15)C21—C261.394 (2)
O1—C11.2315 (17)C21—C221.395 (2)
N1—C11.3871 (18)C22—C231.417 (2)
N1—C21.3974 (17)C22—C271.511 (2)
N1—H10.836 (19)C23—C241.395 (2)
N2—C21.3377 (18)C23—C281.511 (2)
N2—C211.4472 (17)C24—C251.388 (2)
N2—H20.86 (2)C24—H240.9500
C1—C111.4966 (18)C25—C261.395 (2)
C11—C161.3986 (19)C25—H250.9500
C11—C121.402 (2)C26—H260.9500
C12—C131.3930 (19)C27—H27A0.9800
C12—H120.9500C27—H27B0.9800
C13—C141.392 (2)C27—H27C0.9800
C14—C151.390 (2)C28—H28A0.9800
C14—H140.9500C28—H28B0.9800
C15—C161.393 (2)C28—H28C0.9800
C15—H150.9500
C1—N1—C2127.82 (12)C26—C21—C22122.41 (13)
C1—N1—H1117.0 (12)C26—C21—N2117.43 (13)
C2—N1—H1115.2 (12)C22—C21—N2120.12 (12)
C2—N2—C21123.54 (12)C21—C22—C23117.98 (13)
C2—N2—H2116.1 (13)C21—C22—C27121.75 (13)
C21—N2—H2120.3 (13)C23—C22—C27120.27 (13)
O1—C1—N1122.49 (12)C24—C23—C22119.38 (13)
O1—C1—C11121.81 (12)C24—C23—C28120.03 (14)
N1—C1—C11115.70 (12)C22—C23—C28120.59 (14)
N2—C2—N1116.65 (12)C25—C24—C23121.69 (13)
N2—C2—S1124.50 (10)C25—C24—H24119.2
N1—C2—S1118.84 (10)C23—C24—H24119.2
C16—C11—C12120.14 (12)C24—C25—C26119.50 (14)
C16—C11—C1117.91 (12)C24—C25—H25120.2
C12—C11—C1121.84 (12)C26—C25—H25120.2
C13—C12—C11118.60 (13)C21—C26—C25119.04 (13)
C13—C12—H12120.7C21—C26—H26120.5
C11—C12—H12120.7C25—C26—H26120.5
C14—C13—C12121.68 (14)C22—C27—H27A109.5
C14—C13—Cl1119.67 (11)C22—C27—H27B109.5
C12—C13—Cl1118.64 (12)H27A—C27—H27B109.5
C15—C14—C13119.17 (13)C22—C27—H27C109.5
C15—C14—H14120.4H27A—C27—H27C109.5
C13—C14—H14120.4H27B—C27—H27C109.5
C14—C15—C16120.31 (14)C23—C28—H28A109.5
C14—C15—H15119.8C23—C28—H28B109.5
C16—C15—H15119.8H28A—C28—H28B109.5
C15—C16—C11120.08 (14)C23—C28—H28C109.5
C15—C16—H16120.0H28A—C28—H28C109.5
C11—C16—H16120.0H28B—C28—H28C109.5
C2—N1—C1—O114.4 (2)C12—C11—C16—C15−1.2 (2)
C2—N1—C1—C11−164.92 (13)C1—C11—C16—C15−177.41 (13)
C21—N2—C2—N1176.32 (12)C2—N2—C21—C26103.83 (16)
C21—N2—C2—S1−2.7 (2)C2—N2—C21—C22−78.45 (18)
C1—N1—C2—N21.0 (2)C26—C21—C22—C23−0.6 (2)
C1—N1—C2—S1−179.91 (11)N2—C21—C22—C23−178.24 (12)
O1—C1—C11—C1620.3 (2)C26—C21—C22—C27−179.96 (14)
N1—C1—C11—C16−160.43 (12)N2—C21—C22—C272.4 (2)
O1—C1—C11—C12−155.86 (13)C21—C22—C23—C241.0 (2)
N1—C1—C11—C1223.43 (19)C27—C22—C23—C24−179.67 (14)
C16—C11—C12—C131.1 (2)C21—C22—C23—C28−178.42 (14)
C1—C11—C12—C13177.14 (12)C27—C22—C23—C280.9 (2)
C11—C12—C13—C14−0.5 (2)C22—C23—C24—C25−0.8 (2)
C11—C12—C13—Cl1179.51 (10)C28—C23—C24—C25178.63 (15)
C12—C13—C14—C15−0.1 (2)C23—C24—C25—C260.2 (2)
Cl1—C13—C14—C15179.96 (11)C22—C21—C26—C250.0 (2)
C13—C14—C15—C160.0 (2)N2—C21—C26—C25177.71 (13)
C14—C15—C16—C110.7 (2)C24—C25—C26—C210.2 (2)
D—H···AD—HH···AD···AD—H···A
N2—H2···O10.86 (2)1.99 (2)2.6840 (16)137.7 (17)
N1—H1···S1i0.836 (19)2.636 (19)3.4376 (13)161.2 (15)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯O10.86 (2)1.99 (2)2.6840 (16)137.7 (17)
N1—H1⋯S1i0.836 (19)2.636 (19)3.4376 (13)161.2 (15)

Symmetry code: (i) .

  3 in total

1.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  An empirical correction for absorption anisotropy.

Authors:  R H Blessing
Journal:  Acta Crystallogr A       Date:  1995-01-01       Impact factor: 2.290

  3 in total
  5 in total

1.  4-Bromo-N-(di-n-propyl-carbamothioyl)-benzamide.

Authors:  Gün Binzet; Ulrich Flörke; Nevzat Külcü; Hakan Arslan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-02-04

2.  4-Bromo-N-(diethyl-carbamothio-yl)-benzamide.

Authors:  Gün Binzet; Ulrich Flörke; Nevzat Külcü; Hakan Arslan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-31

3.  N-(Diphenyl-carbamothio-yl)-3-methyl-benzamide.

Authors:  Gün Binzet; Ulrich Flörke; Nevzat Külcü; Hakan Arslan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-23

4.  1-Benzoyl-3-(2,4,5-trichloro-phen-yl)thio-urea.

Authors:  M Khawar Rauf; Masahiro Ebihara; Amin Badshah
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-12-14

5.  1-Benzoyl-3-(4-n-butyl-phen-yl)thio-urea.

Authors:  M Khawar Rauf; Masahiro Ebihara; Amin Badshah
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-12-14
  5 in total

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