Literature DB >> 21862387

Balancing eukaryotic replication asymmetry with replication fidelity.

Thomas A Kunkel1.   

Abstract

Coordinated replication of eukaryotic nuclear genomes is asymmetric, with copying of a leading strand template preceding discontinuous copying of the lagging strand template. Replication is catalyzed by DNA polymerases α, δ and ɛ, enzymes that are related yet differ in physical and biochemical properties, including fidelity. Recent studies suggest that Pol ɛ is normally the primary leading strand replicase, whereas most synthesis by Pol δ occurs during lagging strand replication. New studies show that replication asymmetry can generate strand-specific genome instability resulting from biased deoxynucleotide pools and unrepaired ribonucleotides incorporated into DNA during replication, and that the eukaryotic replication machinery has evolved to most efficiently correct those replication errors that are made at the highest rates. Published by Elsevier Ltd.

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Year:  2011        PMID: 21862387      PMCID: PMC3189284          DOI: 10.1016/j.cbpa.2011.07.025

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  50 in total

1.  Mutator phenotypes caused by substitution at a conserved motif A residue in eukaryotic DNA polymerase delta.

Authors:  Ranga N Venkatesan; Jessica J Hsu; Nicole A Lawrence; Bradley D Preston; Lawrence A Loeb
Journal:  J Biol Chem       Date:  2005-12-12       Impact factor: 5.157

Review 2.  DNA polymerases and human disease.

Authors:  Lawrence A Loeb; Raymond J Monnat
Journal:  Nat Rev Genet       Date:  2008-08       Impact factor: 53.242

Review 3.  DNA polymerase epsilon: a polymerase of unusual size (and complexity).

Authors:  Zachary F Pursell; Thomas A Kunkel
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  2008

Review 4.  Polymerase dynamics at the eukaryotic DNA replication fork.

Authors:  Peter M J Burgers
Journal:  J Biol Chem       Date:  2008-10-03       Impact factor: 5.157

5.  Division of labor at the eukaryotic replication fork.

Authors:  Stephanie A Nick McElhinny; Dmitry A Gordenin; Carrie M Stith; Peter M J Burgers; Thomas A Kunkel
Journal:  Mol Cell       Date:  2008-04-25       Impact factor: 17.970

6.  Inefficient proofreading and biased error rates during inaccurate DNA synthesis by a mutant derivative of Saccharomyces cerevisiae DNA polymerase delta.

Authors:  Stephanie A Nick McElhinny; Carrie M Stith; Peter M J Burgers; Thomas A Kunkel
Journal:  J Biol Chem       Date:  2006-11-22       Impact factor: 5.157

Review 7.  Dividing the workload at a eukaryotic replication fork.

Authors:  Thomas A Kunkel; Peter M Burgers
Journal:  Trends Cell Biol       Date:  2008-09-27       Impact factor: 20.808

8.  A possible mechanism for exonuclease 1-independent eukaryotic mismatch repair.

Authors:  Farid A Kadyrov; Jochen Genschel; Yanan Fang; Elisabeth Penland; Winfried Edelmann; Paul Modrich
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-06       Impact factor: 11.205

Review 9.  Replisome structure and conformational dynamics underlie fork progression past obstacles.

Authors:  Nina Y Yao; Mike O'Donnell
Journal:  Curr Opin Cell Biol       Date:  2009-04-16       Impact factor: 8.382

Review 10.  Ribonuclease H: the enzymes in eukaryotes.

Authors:  Susana M Cerritelli; Robert J Crouch
Journal:  FEBS J       Date:  2008-02-18       Impact factor: 5.542

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  25 in total

1.  pH-Dependent Equilibrium between 5-Guanidinohydantoin and Iminoallantoin Affects Nucleotide Insertion Opposite the DNA Lesion.

Authors:  Judy Zhu; Aaron M Fleming; Anita M Orendt; Cynthia J Burrows
Journal:  J Org Chem       Date:  2015-11-24       Impact factor: 4.354

Review 2.  Replicative DNA polymerases.

Authors:  Erik Johansson; Nicholas Dixon
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-06-01       Impact factor: 10.005

Review 3.  Mechanisms of DNA damage, repair, and mutagenesis.

Authors:  Nimrat Chatterjee; Graham C Walker
Journal:  Environ Mol Mutagen       Date:  2017-05-09       Impact factor: 3.216

4.  Dynamic Exchange of Two Essential DNA Polymerases during Replication and after Fork Arrest.

Authors:  Yilai Li; Ziyuan Chen; Lindsay A Matthews; Lyle A Simmons; Julie S Biteen
Journal:  Biophys J       Date:  2019-01-11       Impact factor: 4.033

5.  Single-Molecule DNA Polymerase Dynamics at a Bacterial Replisome in Live Cells.

Authors:  Yi Liao; Yilai Li; Jeremy W Schroeder; Lyle A Simmons; Julie S Biteen
Journal:  Biophys J       Date:  2016-12-20       Impact factor: 4.033

6.  Human Pol ε-dependent replication errors and the influence of mismatch repair on their correction.

Authors:  Anderson Ayuk Agbor; A Yasemin Göksenin; Kimberly G LeCompte; Samuel H Hans; Zachary F Pursell
Journal:  DNA Repair (Amst)       Date:  2013-09-17

Review 7.  Genetic instability in budding and fission yeast-sources and mechanisms.

Authors:  Adrianna Skoneczna; Aneta Kaniak; Marek Skoneczny
Journal:  FEMS Microbiol Rev       Date:  2015-06-24       Impact factor: 16.408

Review 8.  DNA polymerase delta in DNA replication and genome maintenance.

Authors:  Marc J Prindle; Lawrence A Loeb
Journal:  Environ Mol Mutagen       Date:  2012-10-13       Impact factor: 3.216

9.  Topoisomerase 1-mediated removal of ribonucleotides from nascent leading-strand DNA.

Authors:  Jessica S Williams; Dana J Smith; Lisette Marjavaara; Scott A Lujan; Andrei Chabes; Thomas A Kunkel
Journal:  Mol Cell       Date:  2013-01-31       Impact factor: 17.970

10.  A novel mutation in the POLE2 gene causing combined immunodeficiency.

Authors:  Francesco Frugoni; Kerry Dobbs; Kerstin Felgentreff; Hasan Aldhekri; Bandar K Al Saud; Rand Arnaout; Afshan Ashraf Ali; Avinash Abhyankar; Fayhan Alroqi; Silvia Giliani; Mayra Martinez Ojeda; Erdyni Tsitsikov; Sung-Yun Pai; Jean Laurent Casanova; Luigi D Notarangelo; John P Manis
Journal:  J Allergy Clin Immunol       Date:  2015-09-11       Impact factor: 10.793

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