Literature DB >> 18824354

Dividing the workload at a eukaryotic replication fork.

Thomas A Kunkel1, Peter M Burgers.   

Abstract

Efficient and accurate replication of the eukaryotic nuclear genome requires DNA polymerases (Pols) alpha, delta and epsilon. In all current replication fork models, polymerase alpha initiates replication. However, several models have been proposed for the roles of Pol delta and Pol epsilon in subsequent chain elongation and the division of labor between these two polymerases is still unclear. Here, we revisit this issue, considering recent studies with diagnostic mutator polymerases that support a model wherein Pol epsilon is primarily responsible for copying the leading-strand template and Pol delta is primarily responsible for copying the lagging-strand template. We also review earlier studies in light of this model and then consider prospects for future investigations of possible variations on this simple division of labor.

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Year:  2008        PMID: 18824354      PMCID: PMC2665207          DOI: 10.1016/j.tcb.2008.08.005

Source DB:  PubMed          Journal:  Trends Cell Biol        ISSN: 0962-8924            Impact factor:   20.808


  45 in total

1.  DNA polymerase epsilon is required for coordinated and efficient chromosomal DNA replication in Xenopus egg extracts.

Authors:  S Waga; T Masuda; H Takisawa; A Sugino
Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-10       Impact factor: 11.205

2.  Evidence from mutational specificity studies that yeast DNA polymerases delta and epsilon replicate different DNA strands at an intracellular replication fork.

Authors:  R Karthikeyan; E J Vonarx; A F Straffon; M Simon; G Faye; B A Kunz
Journal:  J Mol Biol       Date:  2000-06-02       Impact factor: 5.469

3.  Structure of the replicating complex of a pol alpha family DNA polymerase.

Authors:  M C Franklin; J Wang; T A Steitz
Journal:  Cell       Date:  2001-06-01       Impact factor: 41.582

4.  Using 2-aminopurine fluorescence to measure incorporation of incorrect nucleotides by wild type and mutant bacteriophage T4 DNA polymerases.

Authors:  Elizabeth Fidalgo da Silva; Subhrangsu S Mandal; Linda J Reha-Krantz
Journal:  J Biol Chem       Date:  2002-08-19       Impact factor: 5.157

Review 5.  Cellular DNA replicases: components and dynamics at the replication fork.

Authors:  Aaron Johnson; Mike O'Donnell
Journal:  Annu Rev Biochem       Date:  2005       Impact factor: 23.643

6.  Schizosaccharomyces pombe cells lacking the amino-terminal catalytic domains of DNA polymerase epsilon are viable but require the DNA damage checkpoint control.

Authors:  W Feng; G D'Urso
Journal:  Mol Cell Biol       Date:  2001-07       Impact factor: 4.272

7.  Human DNA polymerase epsilon colocalizes with proliferating cell nuclear antigen and DNA replication late, but not early, in S phase.

Authors:  Jill Fuss; Stuart Linn
Journal:  J Biol Chem       Date:  2001-12-10       Impact factor: 5.157

8.  The DNA polymerase domain of pol(epsilon) is required for rapid, efficient, and highly accurate chromosomal DNA replication, telomere length maintenance, and normal cell senescence in Saccharomyces cerevisiae.

Authors:  Tomoko Ohya; Yasuo Kawasaki; Shin-Ichiro Hiraga; Sakie Kanbara; Kou Nakajo; Naomi Nakashima; Akiko Suzuki; Akio Sugino
Journal:  J Biol Chem       Date:  2002-05-15       Impact factor: 5.157

9.  Discrimination against purine-pyrimidine mispairs in the polymerase active site of DNA polymerase I: a structural explanation.

Authors:  Dana T Minnick; Lixing Liu; Nigel D F Grindley; Thomas A Kunkel; Catherine M Joyce
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-05       Impact factor: 11.205

10.  Yeast origins establish a strand bias for replicational mutagenesis.

Authors:  Youri I Pavlov; Carol S Newlon; Thomas A Kunkel
Journal:  Mol Cell       Date:  2002-07       Impact factor: 17.970

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  153 in total

Review 1.  Okazaki fragment maturation: nucleases take centre stage.

Authors:  Li Zheng; Binghui Shen
Journal:  J Mol Cell Biol       Date:  2011-02       Impact factor: 6.216

2.  DNA polymerase δ and ζ switch by sharing accessory subunits of DNA polymerase δ.

Authors:  Andrey G Baranovskiy; Artem G Lada; Hollie M Siebler; Yinbo Zhang; Youri I Pavlov; Tahir H Tahirov
Journal:  J Biol Chem       Date:  2012-03-30       Impact factor: 5.157

3.  Structural basis for the interaction of a hexameric replicative helicase with the regulatory subunit of human DNA polymerase α-primase.

Authors:  Bo Zhou; Diana R Arnett; Xian Yu; Aaron Brewster; Gregory A Sowd; Charlies L Xie; Stefan Vila; Dahai Gai; Ellen Fanning; Xiaojiang S Chen
Journal:  J Biol Chem       Date:  2012-06-14       Impact factor: 5.157

4.  Early and late steps in telomere overhang processing in normal human cells: the position of the final RNA primer drives telomere shortening.

Authors:  Tracy T Chow; Yong Zhao; Sabrina S Mak; Jerry W Shay; Woodring E Wright
Journal:  Genes Dev       Date:  2012-06-01       Impact factor: 11.361

5.  Structure of a DNA polymerase alpha-primase domain that docks on the SV40 helicase and activates the viral primosome.

Authors:  Hao Huang; Brian E Weiner; Haijiang Zhang; Brian E Fuller; Yue Gao; Brian M Wile; Kun Zhao; Diana R Arnett; Walter J Chazin; Ellen Fanning
Journal:  J Biol Chem       Date:  2010-03-16       Impact factor: 5.157

6.  CDK-dependent complex formation between replication proteins Dpb11, Sld2, Pol (epsilon}, and GINS in budding yeast.

Authors:  Sachiko Muramatsu; Kazuyuki Hirai; Yon-Soo Tak; Yoichiro Kamimura; Hiroyuki Araki
Journal:  Genes Dev       Date:  2010-03-15       Impact factor: 11.361

7.  Differential correction of lagging-strand replication errors made by DNA polymerases {alpha} and {delta}.

Authors:  Stephanie A Nick McElhinny; Grace E Kissling; Thomas A Kunkel
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-01       Impact factor: 11.205

8.  The importance of being DNA.

Authors:  Alan B Clark; Thomas A Kunkel
Journal:  Cell Cycle       Date:  2010-11-15       Impact factor: 4.534

9.  Genome-wide model for the normal eukaryotic DNA replication fork.

Authors:  Andres A Larrea; Scott A Lujan; Stephanie A Nick McElhinny; Piotr A Mieczkowski; Michael A Resnick; Dmitry A Gordenin; Thomas A Kunkel
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-27       Impact factor: 11.205

10.  PCNA accelerates the nucleotide incorporation rate by DNA polymerase δ.

Authors:  Tanumoy Mondol; Joseph L Stodola; Roberto Galletto; Peter M Burgers
Journal:  Nucleic Acids Res       Date:  2019-02-28       Impact factor: 16.971

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