Literature DB >> 23065663

DNA polymerase delta in DNA replication and genome maintenance.

Marc J Prindle1, Lawrence A Loeb.   

Abstract

The eukaryotic genome is in a constant state of modification and repair. Faithful transmission of the genomic information from parent to daughter cells depends upon an extensive system of surveillance, signaling, and DNA repair, as well as accurate synthesis of DNA during replication. Often, replicative synthesis occurs over regions of DNA that have not yet been repaired, presenting further challenges to genomic stability. DNA polymerase δ (pol δ) occupies a central role in all of these processes: catalyzing the accurate replication of a majority of the genome, participating in several DNA repair synthetic pathways, and contributing structurally to the accurate bypass of problematic lesions during translesion synthesis. The concerted actions of pol δ on the lagging strand, pol ϵ on the leading strand, associated replicative factors, and the mismatch repair (MMR) proteins results in a mutation rate of less than one misincorporation per genome per replication cycle. This low mutation rate provides a high level of protection against genetic defects during development and may prevent the initiation of malignancies in somatic cells. This review explores the role of pol δ in replication fidelity and genome maintenance.
Copyright © 2012 Wiley Periodicals, Inc.

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Year:  2012        PMID: 23065663      PMCID: PMC3694620          DOI: 10.1002/em.21745

Source DB:  PubMed          Journal:  Environ Mol Mutagen        ISSN: 0893-6692            Impact factor:   3.216


  199 in total

1.  DNA template requirements for human mismatch repair in vitro.

Authors:  Keith Iams; Erik D Larson; James T Drummond
Journal:  J Biol Chem       Date:  2002-06-19       Impact factor: 5.157

Review 2.  DNA polymerases and human diseases.

Authors:  Joann B Sweasy; Julia M Lauper; Kristin A Eckert
Journal:  Radiat Res       Date:  2006-11       Impact factor: 2.841

3.  Studies on the biochemical basis of spontaneous mutation. I. A comparison of the deoxyribonucleic acid polymerases of mutator, antimutator, and wild type strains of bacteriophage T4.

Authors:  N Muzyczka; R L Poland; M J Bessman
Journal:  J Biol Chem       Date:  1972-11-25       Impact factor: 5.157

4.  Frameshift mutations and the genetic code. This paper is dedicated to Professor Theodosius Dobzhansky on the occasion of his 66th birthday.

Authors:  G Streisinger; Y Okada; J Emrich; J Newton; A Tsugita; E Terzaghi; M Inouye
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1966

5.  Antimutagenic DNA polymerases of bacteriophage T4.

Authors:  J W Drake; E F Allen
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1968

6.  High incidence of epithelial cancers in mice deficient for DNA polymerase delta proofreading.

Authors:  Robert E Goldsby; Laura E Hays; Xin Chen; Elise A Olmsted; William B Slayton; Gerry J Spangrude; Bradley D Preston
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-12       Impact factor: 11.205

7.  Efficiency of correct nucleotide insertion governs DNA polymerase fidelity.

Authors:  William A Beard; David D Shock; Brian J Vande Berg; Samuel H Wilson
Journal:  J Biol Chem       Date:  2002-10-04       Impact factor: 5.157

8.  A conserved Tyr residue is required for sugar selectivity in a Pol alpha DNA polymerase.

Authors:  Guangwei Yang; Matthew Franklin; Jing Li; T-C Lin; William Konigsberg
Journal:  Biochemistry       Date:  2002-08-13       Impact factor: 3.162

9.  Yeast origins establish a strand bias for replicational mutagenesis.

Authors:  Youri I Pavlov; Carol S Newlon; Thomas A Kunkel
Journal:  Mol Cell       Date:  2002-07       Impact factor: 17.970

10.  Production of recombinant human DNA polymerase delta in a Bombyx mori bioreactor.

Authors:  Yajing Zhou; Huiqing Chen; Xiao Li; Yujue Wang; Keping Chen; Sufang Zhang; Xiao Meng; Ernest Y C Lee; Marietta Y W T Lee
Journal:  PLoS One       Date:  2011-07-15       Impact factor: 3.240

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  48 in total

1.  The tail that wags the dog: p12, the smallest subunit of DNA polymerase δ, is degraded by ubiquitin ligases in response to DNA damage and during cell cycle progression.

Authors:  Marietta Y W T Lee; Sufang Zhang; Szu Hua Sharon Lin; Xiaoxiao Wang; Zbigniew Darzynkiewicz; Zhongtao Zhang; Ernest Y C Lee
Journal:  Cell Cycle       Date:  2013-12-03       Impact factor: 4.534

2.  Reduced expression of DNA repair genes and chemosensitivity in 1p19q codeleted lower-grade gliomas.

Authors:  Lei Tang; Lu Deng; Harrison X Bai; James Sun; Natalie Neale; Jing Wu; Yinyan Wang; Ken Chang; Raymond Y Huang; Paul J Zhang; Xuejun Li; Bo Xiao; Ya Cao; Yongguang Tao; Li Yang
Journal:  J Neurooncol       Date:  2018-06-19       Impact factor: 4.130

Review 3.  The Inherent Asymmetry of DNA Replication.

Authors:  Jonathan Snedeker; Matthew Wooten; Xin Chen
Journal:  Annu Rev Cell Dev Biol       Date:  2017-08-11       Impact factor: 13.827

Review 4.  Sources of DNA double-strand breaks and models of recombinational DNA repair.

Authors:  Anuja Mehta; James E Haber
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-08-07       Impact factor: 10.005

5.  Divalent ions attenuate DNA synthesis by human DNA polymerase α by changing the structure of the template/primer or by perturbing the polymerase reaction.

Authors:  Yinbo Zhang; Andrey G Baranovskiy; Emin T Tahirov; Tahir H Tahirov; Youri I Pavlov
Journal:  DNA Repair (Amst)       Date:  2016-05-12

6.  A Redox Role for the [4Fe4S] Cluster of Yeast DNA Polymerase δ.

Authors:  Phillip L Bartels; Joseph L Stodola; Peter M J Burgers; Jacqueline K Barton
Journal:  J Am Chem Soc       Date:  2017-12-06       Impact factor: 15.419

7.  Structures of a DNA Polymerase Inserting Therapeutic Nucleotide Analogues.

Authors:  Matthew A Schaich; Mallory R Smith; Ashley S Cloud; Sean M Holloran; Bret D Freudenthal
Journal:  Chem Res Toxicol       Date:  2017-09-01       Impact factor: 3.739

8.  The Largest Subunit of DNA Polymerase Delta Is Required for Normal Formation of Meiotic Type I Crossovers.

Authors:  Cong Wang; Jiyue Huang; Jun Zhang; Hongkuan Wang; Yapeng Han; Gregory P Copenhaver; Hong Ma; Yingxiang Wang
Journal:  Plant Physiol       Date:  2018-11-20       Impact factor: 8.340

9.  A substitution in the fingers domain of DNA polymerase δ reduces fidelity by altering nucleotide discrimination in the catalytic site.

Authors:  Marc J Prindle; Michael W Schmitt; Fabio Parmeggiani; Lawrence A Loeb
Journal:  J Biol Chem       Date:  2013-01-02       Impact factor: 5.157

10.  The Second Subunit of DNA Polymerase Delta Is Required for Genomic Stability and Epigenetic Regulation.

Authors:  Jixiang Zhang; Shaojun Xie; Jinkui Cheng; Jinsheng Lai; Jian-Kang Zhu; Zhizhong Gong
Journal:  Plant Physiol       Date:  2016-04-25       Impact factor: 8.340

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