Literature DB >> 21588728

9β-Hy-droxy-1β,10α-ep-oxy-parthenolide.

Mohamed Moumou, Mohamed Akssira, Lahcen El Ammari, Ahmed Benharref, Moha Berraho.   

Abstract

The title compound, C(15)H(20)O(5) (systematic name: 5-hydroxy-1a,4a-dimethyl-7-methyleneperhydrodioxireno[5,6:9,10]cyclo-deca[1,2-b]furan-8-one), was obtained by the reaction of 3-chloro-perbenzoic acid with 9β-hy-droxy-parthenolide. The five-membered ring adopts a twist conformation, whereas the ten-membered ring displays an approximate chair-chair conformation. In the crystal structure, mol-ecules are linked into chains propagating along the b axis by inter-molecular O-H⋯O hydrogen bonds.

Entities:  

Year:  2010        PMID: 21588728      PMCID: PMC3007864          DOI: 10.1107/S1600536810033404

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the medicinal uses of the plant Anvillea radiata, see: Abdel Sattar et al. (1996 ▶); Bellakhdar (1997 ▶); El Hassany et al. (2004 ▶); Qureshi et al. (1990 ▶). For ring puckering parameters, see: Cremer & Pople (1975 ▶). For conformations of ten-membered rings, see: Castaneda-Acosta et al. (1997 ▶); Watson & Zabel (1982 ▶).

Experimental

Crystal data

C15H20O5 M = 280.31 Monoclinic, a = 9.2295 (3) Å b = 9.5431 (3) Å c = 9.3787 (3) Å β = 118.662 (2)° V = 724.84 (4) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 298 K 0.27 × 0.18 × 0.12 mm

Data collection

Bruker X8 APEXII CCD area-detector diffractometer 8090 measured reflections 1617 independent reflections 1378 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.090 S = 1.05 1617 reflections 184 parameters 1 restraint H-atom parameters constrained Δρmax = 0.13 e Å−3 Δρmin = −0.13 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810033404/ci5157sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810033404/ci5157Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H20O5F(000) = 300
Mr = 280.31Dx = 1.284 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 8090 reflections
a = 9.2295 (3) Åθ = 2.5–26.5°
b = 9.5431 (3) ŵ = 0.10 mm1
c = 9.3787 (3) ÅT = 298 K
β = 118.662 (2)°Prism, colourless
V = 724.84 (4) Å30.27 × 0.18 × 0.12 mm
Z = 2
Bruker X8 APEXII CCD area-detector diffractometer1378 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.031
graphiteθmax = 26.7°, θmin = 2.5°
φ and ω scansh = −11→11
8090 measured reflectionsk = −10→12
1617 independent reflectionsl = −11→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.090H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0541P)2 + 0.0327P] where P = (Fo2 + 2Fc2)/3
1617 reflections(Δ/σ)max = 0.001
184 parametersΔρmax = 0.13 e Å3
1 restraintΔρmin = −0.13 e Å3
xyzUiso*/Ueq
C1−0.1569 (3)0.2114 (3)0.0240 (3)0.0445 (5)
H1−0.09530.28630.00550.053*
C2−0.3412 (3)0.2235 (3)−0.0757 (3)0.0567 (7)
H2A−0.39190.1709−0.02270.068*
H2B−0.37570.1811−0.18110.068*
C3−0.4043 (3)0.3738 (4)−0.1004 (3)0.0638 (8)
H3A−0.37430.4211−0.17410.077*
H3B−0.52380.3729−0.15050.077*
C4−0.3354 (3)0.4546 (3)0.0564 (3)0.0522 (6)
C5−0.1856 (3)0.5389 (3)0.0973 (3)0.0493 (6)
H5−0.14700.53250.01670.059*
C6−0.0511 (2)0.5623 (2)0.2665 (3)0.0421 (5)
H6−0.09150.54770.34480.051*
C70.0972 (3)0.4660 (2)0.3050 (3)0.0367 (5)
H70.09070.44030.20090.044*
C80.1049 (3)0.3287 (2)0.3942 (3)0.0423 (5)
H8A0.20460.32940.49860.051*
H8B0.01160.32610.41490.051*
C90.1036 (3)0.1953 (2)0.3041 (3)0.0395 (5)
H90.16410.21260.24390.047*
C10−0.0689 (3)0.1455 (2)0.1862 (3)0.0407 (5)
C110.2419 (3)0.5625 (2)0.3892 (3)0.0399 (5)
C120.1773 (3)0.7075 (2)0.3533 (3)0.0465 (5)
C130.3997 (3)0.5360 (3)0.4776 (3)0.0601 (7)
H13A0.47490.60940.51980.072*
H13B0.43670.44380.49800.072*
C14−0.1584 (3)0.0708 (3)0.2633 (3)0.0589 (7)
H14A−0.14110.12020.35930.088*
H14B−0.1164−0.02290.29170.088*
H14C−0.27440.06750.18770.088*
C15−0.3799 (3)0.4050 (3)0.1816 (3)0.0599 (7)
H15A−0.33670.46910.27150.090*
H15B−0.33360.31370.21900.090*
H15C−0.49790.40040.13470.090*
O1−0.3421 (2)0.6072 (2)0.0388 (3)0.0650 (5)
O20.1910 (2)0.09367 (17)0.4267 (2)0.0569 (5)
H20.19730.02040.38430.085*
O30.0115 (2)0.70565 (16)0.2779 (2)0.0539 (4)
O40.2528 (2)0.81591 (19)0.3811 (2)0.0653 (5)
O5−0.0845 (2)0.07350 (19)0.0434 (2)0.0549 (4)
U11U22U33U12U13U23
C10.0426 (11)0.0524 (14)0.0442 (11)−0.0061 (10)0.0254 (9)−0.0082 (11)
C20.0443 (13)0.077 (2)0.0458 (13)−0.0123 (12)0.0194 (10)−0.0122 (13)
C30.0351 (12)0.091 (2)0.0544 (15)0.0047 (12)0.0123 (11)0.0073 (14)
C40.0341 (11)0.0619 (16)0.0599 (15)0.0111 (10)0.0221 (10)0.0078 (12)
C50.0391 (11)0.0543 (14)0.0561 (13)0.0127 (10)0.0241 (10)0.0159 (11)
C60.0454 (11)0.0330 (12)0.0557 (13)0.0072 (9)0.0306 (10)0.0073 (10)
C70.0431 (12)0.0284 (10)0.0398 (11)0.0044 (8)0.0210 (9)0.0030 (8)
C80.0550 (12)0.0300 (11)0.0416 (11)0.0007 (10)0.0228 (9)0.0020 (9)
C90.0446 (11)0.0293 (10)0.0465 (12)0.0023 (9)0.0232 (10)0.0002 (9)
C100.0484 (12)0.0347 (11)0.0488 (12)−0.0043 (9)0.0311 (10)−0.0063 (9)
C110.0450 (11)0.0321 (11)0.0442 (11)0.0009 (9)0.0227 (9)0.0015 (9)
C120.0569 (13)0.0331 (12)0.0544 (13)0.0020 (11)0.0306 (11)−0.0006 (11)
C130.0461 (13)0.0519 (15)0.0699 (16)0.0010 (11)0.0178 (11)0.0071 (13)
C140.0654 (15)0.0529 (16)0.0695 (16)−0.0123 (13)0.0413 (13)0.0045 (13)
C150.0536 (14)0.0636 (17)0.0754 (18)0.0038 (13)0.0413 (13)0.0003 (13)
O10.0441 (10)0.0637 (13)0.0835 (12)0.0202 (8)0.0276 (9)0.0214 (10)
O20.0673 (11)0.0297 (8)0.0630 (10)0.0118 (8)0.0226 (9)0.0057 (8)
O30.0574 (10)0.0299 (8)0.0780 (11)0.0121 (8)0.0355 (9)0.0071 (9)
O40.0786 (13)0.0307 (8)0.0896 (13)−0.0083 (8)0.0429 (10)−0.0048 (9)
O50.0596 (9)0.0517 (10)0.0604 (10)−0.0073 (8)0.0342 (8)−0.0212 (8)
C1—O51.447 (3)C8—C91.525 (3)
C1—C101.477 (3)C8—H8A0.97
C1—C21.502 (3)C8—H8B0.97
C1—H10.98C9—O21.422 (3)
C2—C31.524 (4)C9—C101.515 (3)
C2—H2A0.97C9—H90.98
C2—H2B0.97C10—O51.449 (3)
C3—C41.505 (4)C10—C141.512 (3)
C3—H3A0.97C11—C131.310 (3)
C3—H3B0.97C11—C121.480 (3)
C4—O11.463 (3)C12—O41.204 (3)
C4—C51.482 (4)C12—O31.343 (3)
C4—C151.495 (4)C13—H13A0.93
C5—O11.432 (3)C13—H13B0.93
C5—C61.490 (3)C14—H14A0.96
C5—H50.98C14—H14B0.96
C6—O31.469 (3)C14—H14C0.96
C6—C71.541 (3)C15—H15A0.96
C6—H60.98C15—H15B0.96
C7—C111.498 (3)C15—H15C0.96
C7—C81.537 (3)O2—H20.82
C7—H70.98
O5—C1—C1059.41 (15)C9—C8—H8A108.5
O5—C1—C2117.7 (2)C7—C8—H8A108.5
C10—C1—C2124.9 (2)C9—C8—H8B108.5
O5—C1—H1114.4C7—C8—H8B108.5
C10—C1—H1114.4H8A—C8—H8B107.5
C2—C1—H1114.4O2—C9—C10111.51 (18)
C1—C2—C3113.8 (2)O2—C9—C8105.69 (16)
C1—C2—H2A108.8C10—C9—C8113.10 (17)
C3—C2—H2A108.8O2—C9—H9108.8
C1—C2—H2B108.8C10—C9—H9108.8
C3—C2—H2B108.8C8—C9—H9108.8
H2A—C2—H2B107.7O5—C10—C159.26 (15)
C4—C3—C2112.5 (2)O5—C10—C14112.5 (2)
C4—C3—H3A109.1C1—C10—C14122.4 (2)
C2—C3—H3A109.1O5—C10—C9115.25 (17)
C4—C3—H3B109.1C1—C10—C9119.00 (18)
C2—C3—H3B109.1C14—C10—C9115.0 (2)
H3A—C3—H3B107.8C13—C11—C12121.9 (2)
O1—C4—C558.19 (16)C13—C11—C7130.9 (2)
O1—C4—C15113.1 (2)C12—C11—C7107.19 (18)
C5—C4—C15122.8 (2)O4—C12—O3121.4 (2)
O1—C4—C3115.1 (2)O4—C12—C11128.7 (2)
C5—C4—C3115.8 (2)O3—C12—C11109.87 (19)
C15—C4—C3117.3 (2)C11—C13—H13A120.0
O1—C5—C460.23 (15)C11—C13—H13B120.0
O1—C5—C6120.8 (2)H13A—C13—H13B120.0
C4—C5—C6123.7 (2)C10—C14—H14A109.5
O1—C5—H5113.9C10—C14—H14B109.5
C4—C5—H5113.9H14A—C14—H14B109.5
C6—C5—H5113.9C10—C14—H14C109.5
O3—C6—C5108.32 (18)H14A—C14—H14C109.5
O3—C6—C7105.30 (16)H14B—C14—H14C109.5
C5—C6—C7110.70 (18)C4—C15—H15A109.5
O3—C6—H6110.8C4—C15—H15B109.5
C5—C6—H6110.8H15A—C15—H15B109.5
C7—C6—H6110.8C4—C15—H15C109.5
C11—C7—C8116.15 (18)H15A—C15—H15C109.5
C11—C7—C6102.94 (17)H15B—C15—H15C109.5
C8—C7—C6116.07 (17)C5—O1—C461.57 (16)
C11—C7—H7107.0C9—O2—H2109.5
C8—C7—H7107.0C12—O3—C6111.09 (16)
C6—C7—H7107.0C1—O5—C1061.33 (14)
C9—C8—C7115.12 (17)
D—H···AD—HH···AD···AD—H···A
O2—H2···O4i0.822.022.787 (3)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2⋯O4i0.822.022.787 (3)155

Symmetry code: (i) .

  5 in total

1.  Antitumor germacranolides from Anvillea garcinii.

Authors:  E Abdel Sattar; A M Galal; G S Mossa
Journal:  J Nat Prod       Date:  1996-04       Impact factor: 4.050

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Germacranolides from Anvillea radiata.

Authors:  B El Hassany; F El Hanbali; M Akssira; F Mellouki; A Haidour; A F Barrero
Journal:  Fitoterapia       Date:  2004-09       Impact factor: 2.882

4.  Preliminary toxicity studies on ethanol extracts of the aerial parts of Artemisia abyssinica and A. Inculta in mice.

Authors:  S Qureshi; A M Ageel; M A al-Yahya; M Tariq; J S Mossa; A H Shah
Journal:  J Ethnopharmacol       Date:  1990-02       Impact factor: 4.360

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total
  9 in total

1.  9α-Acet-oxy-1β,10α-ep-oxy-parthenolide.

Authors:  Mohamed Moumou; Mohamed Akssira; Ahmed El Hakmaoui; Lahcen Elammari; Ahmed Benharref; Moha Berraho
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-20

2.  10α-Hy-droxy-4,9-dimethyl-13-[(pyrrol-idin-1-yl)meth-yl]-3,8,15-trioxatetra-cyclo-[10.3.0.0.0]penta-decan-14-one.

Authors:  Mohamed Moumou; Ahmed Benharref; Moha Berraho; Daniel Avignant; Abdelghani Oudahmane; Mohamed Akssira
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-06-30

3.  10α-Hy-droxy-4,9-dimethyl-13-(pipyridin-1-ylmethyl)-3,8,15-trioxatetra-cyclo-[10.3.0.0.0]tetra-decan-14-one.

Authors:  Mohamed Moumou; Ahmed Benharref; Abdelghani Oudahmane; Ahmed Elhakmaoui; Moha Berraho
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-22

4.  10α-Hy-droxy-4,9-dimethyl-13-(morph-o-lin-4-ylmeth-yl)-3,8,15-trioxatetra-cyclo-[10.3.0.0.0]penta-decan-14-one.

Authors:  Mohamed Moumou; Ahmed Benharref; Abdelghani Oudahmane; Fouad Mellouki; Moha Berraho
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-12-17

5.  10α-Hy-droxy-13-{[4-(4-meth-oxy-phen-yl)piperazin-1-yl]meth-yl}-4,9-dimethyl-3,8,15-trioxatetra-cyclo-[10.3.0.0.0]penta-decan-14-one.

Authors:  Mohamed Moumou; Ahmed Benharref; Jean Claude Daran; Rachid Outouch; Moha Berraho
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-17

6.  10α-Hy-droxy-4,9-dimethyl-13-[(4-phenyl-piperazin-1-yl)meth-yl]-3,8,15-trioxatetra-cyclo-[10.3.0.0.0]tetra-decan-14-one.

Authors:  Mohamed Moumou; Ahmed Benharref; Abdelghani Oudahmane; Ahmed Elhakmaoui; Moha Berraho
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-22

7.  (1S,2R,3R,6R,7S,8R,10S,11S)-13-{[4-(4-Chloro-phen-yl)piperazin-1-yl]meth-yl}-10-hy-droxy-4,9-dimethyl-3,8,15-trioxatetra-cyclo-[10.3.0.0(2,4).0(7,9)]penta-decan-14-one.

Authors:  Mohamed Moumou; Ahmed Benharref; Lahcen El Ammari; Mina Adil; Moha Berraho
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-24

8.  10α-Hy-droxy-13-{[4-(2-hy-droxy-phen-yl)piperazin-1-yl]meth-yl}-4,9-dimethyl-3,8,15-trioxatetra-cyclo-[10.3.0.0(2,4).0(7,9)]penta-decan-14-one.

Authors:  Mohamed Moumou; Ahmed Benharref; Lahcen El Ammari; Mina Adil; Moha Berraho
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-04-06

9.  12-{[4-(4-Bromo-phen-yl)piperazin-1-yl]meth-yl}-9α-hy-droxy-4,8-dimethyl-3,14-dioxatri-cyclo-[9.3.0.0(2,4)]tetra-dec-7-en-13-one.

Authors:  Mohamed Loubidi; Ahmed Benharref; Lahcen El Ammari; Mohamed Saadi; Moha Berraho
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-03-29
  9 in total

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