| Literature DB >> 22590215 |
Mohamed Moumou, Ahmed Benharref, Lahcen El Ammari, Mina Adil, Moha Berraho.
Abstract
The title compound, C(25)H(34)N(2)O(6), was synthesized from 9α-hy-droxy-parthenolide (9α-hy-droxy-4,8-dimethyl-12-methyl-ene-3,14-dioxatricyclo-[9.3.0.0(2,4)]tetra-dec-7-en-13-one), which was isolated from the chloro-form extract of the aerial parts of Anvillea radiata. The ten-membered ring adopts an approximate chair-chair conformation, while the piperazine ring displays a near regular chair conformation and the five-membered ring an envelope conformation with the C atom closest to the hy-droxy group forming the flap. The mol-ecular conformation is stabilized by an O-H⋯N hydrogen bond, which generates an S(7) loop, and the crystal structure features weak C-H⋯O inter-actions.Entities:
Year: 2012 PMID: 22590215 PMCID: PMC3344453 DOI: 10.1107/S1600536812013876
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C25H34N2O6 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 4934 reflections |
| θ = 2.4–26.4° | |
| µ = 0.09 mm−1 | |
| Platelet, colourless | |
| 0.27 × 0.21 × 0.06 mm |
| Agilent Xcalibur Sapphire1 long-nozzle diffractometer | 2540 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 26.4°, θmin = 2.4° |
| Detector resolution: 8.2632 pixels mm-1 | |
| ω scan | |
| 27441 measured reflections | |
| 2829 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2829 reflections | (Δ/σ)max = 0.002 |
| 302 parameters | Δρmax = 0.19 e Å−3 |
| 0 restraints | Δρmin = −0.18 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.9344 (2) | 0.90928 (19) | −0.02860 (7) | 0.0367 (4) | |
| H1 | 0.8850 | 0.8325 | −0.0428 | 0.044* | |
| C2 | 0.9628 (2) | 1.01210 (18) | −0.06365 (7) | 0.0365 (4) | |
| H2 | 1.0098 | 1.0913 | −0.0506 | 0.044* | |
| C3 | 0.8665 (2) | 1.0334 (2) | −0.10613 (7) | 0.0396 (4) | |
| C4 | 0.8570 (3) | 1.1717 (2) | −0.12197 (7) | 0.0445 (5) | |
| H4A | 0.8464 | 1.1734 | −0.1555 | 0.053* | |
| H4B | 0.9593 | 1.2150 | −0.1139 | 0.053* | |
| C5 | 0.7118 (3) | 1.2463 (2) | −0.10047 (8) | 0.0462 (5) | |
| H5A | 0.7327 | 1.3380 | −0.1037 | 0.055* | |
| H5B | 0.6123 | 1.2265 | −0.1178 | 0.055* | |
| C6 | 0.6825 (2) | 1.21618 (18) | −0.05000 (7) | 0.0379 (4) | |
| H6 | 0.7828 | 1.2067 | −0.0313 | 0.045* | |
| C7 | 0.5359 (2) | 1.1463 (2) | −0.03197 (7) | 0.0396 (4) | |
| C8 | 0.5440 (2) | 1.06794 (19) | 0.01276 (7) | 0.0394 (4) | |
| H8 | 0.4306 | 1.0443 | 0.0211 | 0.047* | |
| C9 | 0.6417 (2) | 0.94191 (19) | 0.00614 (7) | 0.0372 (4) | |
| H9A | 0.6198 | 0.9086 | −0.0247 | 0.045* | |
| H9B | 0.6022 | 0.8787 | 0.0283 | 0.045* | |
| C10 | 0.8304 (2) | 0.95749 (18) | 0.01223 (7) | 0.0335 (4) | |
| H10 | 0.8530 | 1.0498 | 0.0158 | 0.040* | |
| C11 | 1.0873 (3) | 0.8737 (2) | 0.03774 (8) | 0.0446 (5) | |
| C12 | 0.9101 (3) | 0.8883 (2) | 0.05318 (7) | 0.0412 (5) | |
| H12 | 0.8608 | 0.8024 | 0.0561 | 0.049* | |
| C13 | 0.9013 (3) | 0.9554 (3) | 0.10023 (7) | 0.0496 (5) | |
| H13A | 0.9726 | 0.9101 | 0.1218 | 0.060* | |
| H13B | 0.9435 | 1.0425 | 0.0970 | 0.060* | |
| C14 | 0.7331 (3) | 0.9440 (2) | −0.12263 (8) | 0.0483 (5) | |
| H14A | 0.7379 | 0.9369 | −0.1558 | 0.073* | |
| H14B | 0.6273 | 0.9775 | −0.1136 | 0.073* | |
| H14C | 0.7486 | 0.8604 | −0.1090 | 0.073* | |
| C15 | 0.3946 (3) | 1.1047 (3) | −0.06229 (9) | 0.0563 (6) | |
| H15A | 0.2926 | 1.1346 | −0.0492 | 0.084* | |
| H15B | 0.3928 | 1.0123 | −0.0643 | 0.084* | |
| H15C | 0.4082 | 1.1407 | −0.0927 | 0.084* | |
| C16 | 0.6773 (3) | 0.8326 (2) | 0.13338 (8) | 0.0527 (6) | |
| H16A | 0.7548 | 0.7954 | 0.1553 | 0.063* | |
| H16B | 0.6741 | 0.7773 | 0.1062 | 0.063* | |
| C17 | 0.5082 (3) | 0.8371 (2) | 0.15515 (8) | 0.0536 (6) | |
| H17A | 0.4288 | 0.8697 | 0.1328 | 0.064* | |
| H17B | 0.4746 | 0.7508 | 0.1641 | 0.064* | |
| C18 | 0.5649 (4) | 1.0502 (2) | 0.18283 (8) | 0.0589 (6) | |
| H18A | 0.5678 | 1.1051 | 0.2101 | 0.071* | |
| H18B | 0.4873 | 1.0870 | 0.1609 | 0.071* | |
| C19 | 0.7342 (4) | 1.0444 (2) | 0.16120 (8) | 0.0562 (6) | |
| H19A | 0.7689 | 1.1308 | 0.1526 | 0.067* | |
| H19B | 0.8125 | 1.0112 | 0.1837 | 0.067* | |
| C20 | 0.3698 (3) | 0.9137 (3) | 0.22451 (7) | 0.0543 (6) | |
| C21 | 0.2250 (4) | 0.8504 (4) | 0.21250 (9) | 0.0761 (9) | |
| H21 | 0.2159 | 0.8136 | 0.1832 | 0.091* | |
| C22 | 0.3734 (4) | 0.9667 (3) | 0.26908 (8) | 0.0709 (8) | |
| C23 | 0.0932 (4) | 0.8409 (5) | 0.24322 (11) | 0.0987 (13) | |
| H23 | −0.0019 | 0.7968 | 0.2345 | 0.118* | |
| C24 | 0.1028 (5) | 0.8958 (5) | 0.28612 (11) | 0.1027 (14) | |
| H24 | 0.0137 | 0.8906 | 0.3064 | 0.123* | |
| C25 | 0.2443 (5) | 0.9589 (4) | 0.29923 (10) | 0.0941 (12) | |
| H25 | 0.2519 | 0.9960 | 0.3285 | 0.113* | |
| N1 | 0.7348 (2) | 0.96134 (17) | 0.11978 (6) | 0.0455 (4) | |
| N2 | 0.5106 (3) | 0.92072 (19) | 0.19603 (6) | 0.0495 (5) | |
| O1 | 0.5493 (2) | 1.28526 (14) | −0.02754 (5) | 0.0491 (4) | |
| O2 | 1.03111 (18) | 0.97758 (15) | −0.10802 (5) | 0.0469 (4) | |
| O3 | 1.09685 (17) | 0.88006 (14) | −0.00863 (5) | 0.0451 (4) | |
| O4 | 1.2079 (2) | 0.85660 (19) | 0.06106 (7) | 0.0647 (5) | |
| O5 | 0.6083 (2) | 1.14333 (15) | 0.04947 (5) | 0.0477 (4) | |
| H5 | 0.6267 | 1.0969 | 0.0719 | 0.071* | |
| O6 | 0.5154 (3) | 1.0222 (2) | 0.28351 (6) | 0.0802 (7) | |
| H6A | 0.5209 | 1.0960 | 0.2733 | 0.120* |
| C1 | 0.0321 (9) | 0.0299 (9) | 0.0479 (11) | 0.0032 (8) | −0.0011 (8) | −0.0058 (8) |
| C2 | 0.0312 (9) | 0.0324 (9) | 0.0459 (11) | 0.0008 (8) | 0.0036 (8) | −0.0072 (8) |
| C3 | 0.0390 (10) | 0.0366 (10) | 0.0432 (10) | 0.0039 (9) | 0.0050 (9) | −0.0047 (9) |
| C4 | 0.0502 (12) | 0.0408 (11) | 0.0424 (11) | −0.0014 (10) | 0.0038 (10) | 0.0026 (9) |
| C5 | 0.0512 (12) | 0.0354 (10) | 0.0520 (12) | 0.0050 (10) | −0.0030 (10) | 0.0036 (9) |
| C6 | 0.0368 (9) | 0.0273 (9) | 0.0495 (11) | 0.0038 (8) | −0.0024 (9) | −0.0031 (8) |
| C7 | 0.0292 (9) | 0.0368 (10) | 0.0528 (11) | 0.0055 (8) | 0.0020 (9) | −0.0069 (9) |
| C8 | 0.0286 (9) | 0.0387 (11) | 0.0510 (11) | −0.0012 (8) | 0.0058 (9) | −0.0084 (9) |
| C9 | 0.0334 (9) | 0.0302 (9) | 0.0481 (11) | −0.0046 (8) | 0.0032 (8) | −0.0024 (9) |
| C10 | 0.0338 (9) | 0.0247 (8) | 0.0422 (10) | −0.0027 (8) | 0.0003 (8) | −0.0024 (8) |
| C11 | 0.0449 (11) | 0.0295 (10) | 0.0595 (14) | 0.0035 (9) | −0.0052 (10) | 0.0031 (9) |
| C12 | 0.0423 (11) | 0.0317 (10) | 0.0497 (12) | −0.0038 (9) | −0.0032 (9) | 0.0042 (9) |
| C13 | 0.0526 (12) | 0.0487 (12) | 0.0476 (12) | −0.0130 (11) | −0.0063 (10) | 0.0030 (10) |
| C14 | 0.0514 (12) | 0.0449 (12) | 0.0486 (12) | 0.0008 (11) | −0.0045 (10) | −0.0093 (10) |
| C15 | 0.0347 (10) | 0.0661 (15) | 0.0681 (15) | 0.0008 (11) | −0.0093 (11) | −0.0049 (13) |
| C16 | 0.0673 (15) | 0.0400 (11) | 0.0507 (13) | −0.0082 (11) | 0.0034 (11) | −0.0016 (10) |
| C17 | 0.0652 (15) | 0.0479 (12) | 0.0477 (12) | −0.0124 (12) | 0.0016 (11) | −0.0064 (10) |
| C18 | 0.0862 (18) | 0.0468 (13) | 0.0437 (12) | −0.0020 (14) | 0.0024 (12) | −0.0055 (10) |
| C19 | 0.0812 (17) | 0.0421 (12) | 0.0453 (12) | −0.0141 (13) | −0.0024 (12) | −0.0038 (10) |
| C20 | 0.0631 (14) | 0.0615 (15) | 0.0383 (11) | 0.0001 (12) | −0.0038 (10) | 0.0010 (10) |
| C21 | 0.0652 (17) | 0.109 (2) | 0.0540 (15) | −0.0100 (18) | 0.0020 (13) | −0.0159 (16) |
| C22 | 0.0793 (18) | 0.093 (2) | 0.0400 (12) | −0.0080 (18) | −0.0029 (13) | −0.0030 (14) |
| C23 | 0.0665 (18) | 0.152 (4) | 0.077 (2) | −0.017 (2) | 0.0028 (16) | −0.017 (2) |
| C24 | 0.080 (2) | 0.166 (4) | 0.0622 (18) | −0.005 (3) | 0.0191 (17) | −0.009 (2) |
| C25 | 0.099 (2) | 0.136 (3) | 0.0474 (15) | −0.010 (3) | 0.0122 (16) | −0.0135 (19) |
| N1 | 0.0591 (11) | 0.0380 (9) | 0.0395 (9) | −0.0088 (9) | −0.0025 (8) | −0.0001 (8) |
| N2 | 0.0633 (12) | 0.0474 (10) | 0.0377 (9) | −0.0045 (9) | −0.0025 (9) | −0.0010 (8) |
| O1 | 0.0493 (8) | 0.0347 (7) | 0.0632 (9) | 0.0146 (7) | 0.0045 (8) | −0.0050 (7) |
| O2 | 0.0422 (8) | 0.0502 (9) | 0.0483 (8) | 0.0074 (7) | 0.0107 (7) | −0.0054 (7) |
| O3 | 0.0345 (7) | 0.0412 (8) | 0.0595 (9) | 0.0091 (6) | 0.0002 (7) | 0.0014 (7) |
| O4 | 0.0506 (10) | 0.0639 (11) | 0.0795 (12) | 0.0140 (9) | −0.0195 (9) | 0.0087 (10) |
| O5 | 0.0556 (9) | 0.0409 (8) | 0.0464 (8) | 0.0056 (7) | 0.0029 (7) | −0.0096 (7) |
| O6 | 0.0937 (15) | 0.1145 (18) | 0.0323 (8) | −0.0403 (14) | −0.0040 (9) | −0.0159 (10) |
| C1—O3 | 1.468 (2) | C13—H13A | 0.9700 |
| C1—C2 | 1.486 (3) | C13—H13B | 0.9700 |
| C1—C10 | 1.531 (3) | C14—H14A | 0.9600 |
| C1—H1 | 0.9800 | C14—H14B | 0.9600 |
| C2—O2 | 1.438 (2) | C14—H14C | 0.9600 |
| C2—C3 | 1.468 (3) | C15—H15A | 0.9600 |
| C2—H2 | 0.9800 | C15—H15B | 0.9600 |
| C3—O2 | 1.454 (2) | C15—H15C | 0.9600 |
| C3—C14 | 1.501 (3) | C16—N1 | 1.467 (3) |
| C3—C4 | 1.507 (3) | C16—C17 | 1.507 (4) |
| C4—C5 | 1.538 (3) | C16—H16A | 0.9700 |
| C4—H4A | 0.9700 | C16—H16B | 0.9700 |
| C4—H4B | 0.9700 | C17—N2 | 1.463 (3) |
| C5—C6 | 1.507 (3) | C17—H17A | 0.9700 |
| C5—H5A | 0.9700 | C17—H17B | 0.9700 |
| C5—H5B | 0.9700 | C18—N2 | 1.462 (3) |
| C6—O1 | 1.447 (2) | C18—C19 | 1.507 (4) |
| C6—C7 | 1.484 (3) | C18—H18A | 0.9700 |
| C6—H6 | 0.9800 | C18—H18B | 0.9700 |
| C7—O1 | 1.450 (3) | C19—N1 | 1.472 (3) |
| C7—C15 | 1.503 (3) | C19—H19A | 0.9700 |
| C7—C8 | 1.525 (3) | C19—H19B | 0.9700 |
| C8—O5 | 1.415 (2) | C20—C21 | 1.387 (4) |
| C8—C9 | 1.539 (3) | C20—C22 | 1.397 (3) |
| C8—H8 | 0.9800 | C20—N2 | 1.407 (3) |
| C9—C10 | 1.546 (3) | C21—C23 | 1.390 (4) |
| C9—H9A | 0.9700 | C21—H21 | 0.9300 |
| C9—H9B | 0.9700 | C22—O6 | 1.352 (4) |
| C10—C12 | 1.524 (3) | C22—C25 | 1.362 (4) |
| C10—H10 | 0.9800 | C23—C24 | 1.363 (5) |
| C11—O4 | 1.198 (3) | C23—H23 | 0.9300 |
| C11—O3 | 1.340 (3) | C24—C25 | 1.372 (5) |
| C11—C12 | 1.510 (3) | C24—H24 | 0.9300 |
| C12—C13 | 1.525 (3) | C25—H25 | 0.9300 |
| C12—H12 | 0.9800 | O5—H5 | 0.8200 |
| C13—N1 | 1.463 (3) | O6—H6A | 0.8200 |
| O3—C1—C2 | 106.00 (15) | N1—C13—H13A | 108.8 |
| O3—C1—C10 | 105.01 (15) | C12—C13—H13A | 108.8 |
| C2—C1—C10 | 111.93 (16) | N1—C13—H13B | 108.8 |
| O3—C1—H1 | 111.2 | C12—C13—H13B | 108.8 |
| C2—C1—H1 | 111.2 | H13A—C13—H13B | 107.7 |
| C10—C1—H1 | 111.2 | C3—C14—H14A | 109.5 |
| O2—C2—C3 | 60.01 (12) | C3—C14—H14B | 109.5 |
| O2—C2—C1 | 119.04 (16) | H14A—C14—H14B | 109.5 |
| C3—C2—C1 | 126.31 (18) | C3—C14—H14C | 109.5 |
| O2—C2—H2 | 113.6 | H14A—C14—H14C | 109.5 |
| C3—C2—H2 | 113.6 | H14B—C14—H14C | 109.5 |
| C1—C2—H2 | 113.6 | C7—C15—H15A | 109.5 |
| O2—C3—C2 | 58.99 (12) | C7—C15—H15B | 109.5 |
| O2—C3—C14 | 113.75 (17) | H15A—C15—H15B | 109.5 |
| C2—C3—C14 | 123.63 (19) | C7—C15—H15C | 109.5 |
| O2—C3—C4 | 114.47 (17) | H15A—C15—H15C | 109.5 |
| C2—C3—C4 | 115.01 (18) | H15B—C15—H15C | 109.5 |
| C14—C3—C4 | 117.03 (19) | N1—C16—C17 | 111.8 (2) |
| C3—C4—C5 | 113.32 (18) | N1—C16—H16A | 109.3 |
| C3—C4—H4A | 108.9 | C17—C16—H16A | 109.3 |
| C5—C4—H4A | 108.9 | N1—C16—H16B | 109.3 |
| C3—C4—H4B | 108.9 | C17—C16—H16B | 109.3 |
| C5—C4—H4B | 108.9 | H16A—C16—H16B | 107.9 |
| H4A—C4—H4B | 107.7 | N2—C17—C16 | 110.0 (2) |
| C6—C5—C4 | 113.91 (18) | N2—C17—H17A | 109.7 |
| C6—C5—H5A | 108.8 | C16—C17—H17A | 109.7 |
| C4—C5—H5A | 108.8 | N2—C17—H17B | 109.7 |
| C6—C5—H5B | 108.8 | C16—C17—H17B | 109.7 |
| C4—C5—H5B | 108.8 | H17A—C17—H17B | 108.2 |
| H5A—C5—H5B | 107.7 | N2—C18—C19 | 110.2 (2) |
| O1—C6—C7 | 59.28 (12) | N2—C18—H18A | 109.6 |
| O1—C6—C5 | 116.54 (17) | C19—C18—H18A | 109.6 |
| C7—C6—C5 | 124.42 (19) | N2—C18—H18B | 109.6 |
| O1—C6—H6 | 114.9 | C19—C18—H18B | 109.6 |
| C7—C6—H6 | 114.9 | H18A—C18—H18B | 108.1 |
| C5—C6—H6 | 114.9 | N1—C19—C18 | 111.2 (2) |
| O1—C7—C6 | 59.10 (13) | N1—C19—H19A | 109.4 |
| O1—C7—C15 | 113.14 (19) | C18—C19—H19A | 109.4 |
| C6—C7—C15 | 123.0 (2) | N1—C19—H19B | 109.4 |
| O1—C7—C8 | 116.85 (17) | C18—C19—H19B | 109.4 |
| C6—C7—C8 | 121.45 (17) | H19A—C19—H19B | 108.0 |
| C15—C7—C8 | 111.79 (19) | C21—C20—C22 | 115.7 (3) |
| O5—C8—C7 | 110.71 (17) | C21—C20—N2 | 124.3 (2) |
| O5—C8—C9 | 111.84 (17) | C22—C20—N2 | 119.9 (3) |
| C7—C8—C9 | 111.69 (16) | C20—C21—C23 | 121.6 (3) |
| O5—C8—H8 | 107.5 | C20—C21—H21 | 119.2 |
| C7—C8—H8 | 107.5 | C23—C21—H21 | 119.2 |
| C9—C8—H8 | 107.5 | O6—C22—C25 | 118.8 (3) |
| C8—C9—C10 | 113.91 (16) | O6—C22—C20 | 117.9 (3) |
| C8—C9—H9A | 108.8 | C25—C22—C20 | 123.1 (3) |
| C10—C9—H9A | 108.8 | C24—C23—C21 | 120.3 (3) |
| C8—C9—H9B | 108.8 | C24—C23—H23 | 119.9 |
| C10—C9—H9B | 108.8 | C21—C23—H23 | 119.9 |
| H9A—C9—H9B | 107.7 | C23—C24—C25 | 119.7 (3) |
| C12—C10—C1 | 102.06 (15) | C23—C24—H24 | 120.1 |
| C12—C10—C9 | 117.19 (17) | C25—C24—H24 | 120.1 |
| C1—C10—C9 | 114.97 (16) | C22—C25—C24 | 119.6 (3) |
| C12—C10—H10 | 107.3 | C22—C25—H25 | 120.2 |
| C1—C10—H10 | 107.3 | C24—C25—H25 | 120.2 |
| C9—C10—H10 | 107.3 | C13—N1—C16 | 110.91 (19) |
| O4—C11—O3 | 121.3 (2) | C13—N1—C19 | 109.86 (18) |
| O4—C11—C12 | 128.6 (2) | C16—N1—C19 | 108.35 (16) |
| O3—C11—C12 | 110.09 (18) | C20—N2—C18 | 116.3 (2) |
| C11—C12—C10 | 102.80 (17) | C20—N2—C17 | 115.4 (2) |
| C11—C12—C13 | 110.61 (18) | C18—N2—C17 | 109.78 (17) |
| C10—C12—C13 | 117.03 (17) | C6—O1—C7 | 61.63 (12) |
| C11—C12—H12 | 108.7 | C2—O2—C3 | 61.00 (13) |
| C10—C12—H12 | 108.7 | C11—O3—C1 | 110.46 (16) |
| C13—C12—H12 | 108.7 | C8—O5—H5 | 109.5 |
| N1—C13—C12 | 113.86 (18) | C22—O6—H6A | 109.5 |
| H··· | ||||
| O5—H5···N1 | 0.82 | 2.15 | 2.952 (2) | 164 |
| C1—H1···O4i | 0.98 | 2.49 | 3.440 (3) | 165 |
| C10—H10···O1ii | 0.98 | 2.36 | 3.232 (2) | 148 |
| C18—H18 | 0.97 | 2.32 | 2.943 (3) | 121 |
| C25—H25···O2iii | 0.93 | 2.55 | 3.299 (4) | 138 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O5—H5⋯N1 | 0.82 | 2.15 | 2.952 (2) | 164 |
| C1—H1⋯O4i | 0.98 | 2.49 | 3.440 (3) | 165 |
| C10—H10⋯O1ii | 0.98 | 2.36 | 3.232 (2) | 148 |
| C18—H18 | 0.97 | 2.32 | 2.943 (3) | 121 |
| C25—H25⋯O2iii | 0.93 | 2.55 | 3.299 (4) | 138 |
Symmetry codes: (i) ; (ii) ; (iii) .