| Literature DB >> 22220021 |
Mohamed Moumou, Ahmed Benharref, Abdelghani Oudahmane, Ahmed Elhakmaoui, Moha Berraho.
Abstract
The title compound, C(20)H(31)NO(5), was synthesized from 9α-hy-droxy-parthenolide (9α-hy-droxy-4,8-dimethyl-12-methylen-3,14-dioxa-tricyclo-[9.3.0.0(2),(4)]tetra-dec-7-en-13-one), which was isolated from the chloro-form extract of the aerial parts of Anvillea radiata. The mol-ecule is built up from fused five-and ten-membered rings with the pipyridin-1-yl-methyl group as a substituent. The ten-membered ring adopts an approximate chair-chair conformation, while the six- and five-membered rings display chair and envelope conformations, respectively. The dihedral angle between the mean planes of the ten-membered ring and the lactone ring is 20.8 (3)°. An intra-molecular O-H⋯N hydrogen-bond occurs. The crystal structure is stabilized by weak inter-molecular C-H⋯O hydrogen bonds.Entities:
Year: 2011 PMID: 22220021 PMCID: PMC3247403 DOI: 10.1107/S1600536811042644
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H31NO5 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 8987 reflections |
| θ = 2.6–26.4° | |
| µ = 0.09 mm−1 | |
| Prism, colourless | |
| 0.85 × 0.48 × 0.36 mm |
| Bruker X8 APEX CCD area-detector diffractometer | 1707 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 26.4°, θmin = 3.3° |
| φ and ω scans | |
| 8978 measured reflections | |
| 2291 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 2291 reflections | Δρmax = 0.16 e Å−3 |
| 239 parameters | Δρmin = −0.16 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.035 (3) |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| C1 | −0.2580 (3) | 0.4198 (2) | −0.04973 (10) | 0.0372 (6) | |
| H1 | −0.2042 | 0.3507 | −0.0705 | 0.045* | |
| C2 | −0.2861 (3) | 0.5264 (2) | −0.09033 (10) | 0.0368 (6) | |
| H2 | −0.3339 | 0.5994 | −0.0707 | 0.044* | |
| C3 | −0.1874 (3) | 0.5566 (2) | −0.14313 (10) | 0.0413 (6) | |
| C4 | −0.1764 (4) | 0.6933 (2) | −0.15778 (11) | 0.0512 (7) | |
| H4A | −0.2786 | 0.7333 | −0.1459 | 0.061* | |
| H4B | −0.1655 | 0.7026 | −0.2005 | 0.061* | |
| C5 | −0.0314 (4) | 0.7599 (2) | −0.12752 (11) | 0.0521 (7) | |
| H5A | 0.0689 | 0.7426 | −0.1497 | 0.062* | |
| H5B | −0.0505 | 0.8488 | −0.1291 | 0.062* | |
| C6 | −0.0053 (3) | 0.7223 (2) | −0.06357 (10) | 0.0395 (6) | |
| H6 | −0.1072 | 0.7104 | −0.0408 | 0.047* | |
| C7 | 0.1382 (3) | 0.6516 (2) | −0.04136 (10) | 0.0389 (6) | |
| C8 | 0.1253 (3) | 0.5682 (2) | 0.01315 (10) | 0.0383 (6) | |
| H8 | 0.2380 | 0.5444 | 0.0245 | 0.046* | |
| C9 | 0.0296 (3) | 0.4476 (2) | −0.00041 (10) | 0.0360 (5) | |
| H9A | 0.0557 | 0.4216 | −0.0406 | 0.043* | |
| H9B | 0.0682 | 0.3830 | 0.0263 | 0.043* | |
| C10 | −0.1594 (3) | 0.45804 (19) | 0.00554 (9) | 0.0336 (5) | |
| H10 | −0.1854 | 0.5453 | 0.0138 | 0.040* | |
| C11 | −0.2408 (3) | 0.3801 (2) | 0.05391 (10) | 0.0402 (6) | |
| H11 | −0.1878 | 0.2981 | 0.0548 | 0.048* | |
| C12 | −0.4147 (3) | 0.3652 (2) | 0.03188 (12) | 0.0475 (7) | |
| C13 | −0.2395 (4) | 0.4343 (2) | 0.11655 (11) | 0.0496 (7) | |
| H13A | −0.2902 | 0.5160 | 0.1155 | 0.060* | |
| H13B | −0.3068 | 0.3821 | 0.1420 | 0.060* | |
| C14 | −0.0526 (4) | 0.4736 (3) | −0.16635 (11) | 0.0553 (7) | |
| H14A | −0.0692 | 0.3906 | −0.1518 | 0.083* | |
| H14B | 0.0527 | 0.5039 | −0.1531 | 0.083* | |
| H14C | −0.0554 | 0.4732 | −0.2090 | 0.083* | |
| C15 | 0.2820 (3) | 0.6167 (3) | −0.08001 (12) | 0.0577 (8) | |
| H15A | 0.2761 | 0.6619 | −0.1167 | 0.087* | |
| H15B | 0.2787 | 0.5291 | −0.0881 | 0.087* | |
| H15C | 0.3833 | 0.6368 | −0.0600 | 0.087* | |
| C16 | −0.0852 (4) | 0.5186 (2) | 0.19775 (11) | 0.0609 (8) | |
| H16A | −0.1613 | 0.4786 | 0.2250 | 0.073* | |
| H16B | −0.1281 | 0.6007 | 0.1888 | 0.073* | |
| C17 | −0.0073 (4) | 0.3219 (2) | 0.15623 (12) | 0.0555 (7) | |
| H17A | −0.0010 | 0.2739 | 0.1198 | 0.067* | |
| H17B | −0.0819 | 0.2791 | 0.1830 | 0.067* | |
| C18 | 0.0815 (5) | 0.5311 (3) | 0.22704 (13) | 0.0763 (11) | |
| H18A | 0.0696 | 0.5773 | 0.2638 | 0.092* | |
| H18B | 0.1548 | 0.5776 | 0.2012 | 0.092* | |
| C19 | 0.1611 (4) | 0.3277 (3) | 0.18398 (13) | 0.0736 (10) | |
| H19A | 0.2387 | 0.3637 | 0.1560 | 0.088* | |
| H19B | 0.1983 | 0.2443 | 0.1934 | 0.088* | |
| C20 | 0.1572 (5) | 0.4055 (3) | 0.24020 (13) | 0.0764 (10) | |
| H20A | 0.0927 | 0.3633 | 0.2704 | 0.092* | |
| H20B | 0.2687 | 0.4164 | 0.2552 | 0.092* | |
| N1 | −0.0753 (3) | 0.44545 (17) | 0.14266 (8) | 0.0434 (5) | |
| O1 | 0.0559 (2) | 0.63372 (15) | 0.06146 (7) | 0.0471 (5) | |
| H21 | 0.0226 | 0.5841 | 0.0864 | 0.071* | |
| O2 | −0.4209 (2) | 0.38309 (15) | −0.02731 (8) | 0.0470 (5) | |
| O3 | −0.3509 (2) | 0.50418 (16) | −0.14908 (7) | 0.0496 (5) | |
| O4 | 0.1255 (2) | 0.78432 (15) | −0.03166 (7) | 0.0490 (5) | |
| O5 | −0.5382 (3) | 0.34028 (19) | 0.05929 (9) | 0.0674 (6) |
| C1 | 0.0344 (13) | 0.0347 (11) | 0.0426 (13) | −0.0018 (11) | −0.0010 (11) | −0.0057 (10) |
| C2 | 0.0345 (14) | 0.0383 (12) | 0.0375 (12) | −0.0001 (11) | −0.0080 (10) | −0.0038 (10) |
| C3 | 0.0428 (15) | 0.0471 (13) | 0.0340 (12) | −0.0030 (13) | −0.0071 (11) | −0.0045 (11) |
| C4 | 0.0597 (18) | 0.0551 (15) | 0.0389 (14) | −0.0029 (15) | −0.0084 (13) | 0.0070 (12) |
| C5 | 0.0610 (18) | 0.0456 (14) | 0.0496 (15) | −0.0062 (14) | −0.0019 (14) | 0.0091 (12) |
| C6 | 0.0409 (14) | 0.0355 (11) | 0.0420 (13) | −0.0074 (12) | −0.0008 (11) | −0.0004 (10) |
| C7 | 0.0333 (13) | 0.0410 (12) | 0.0425 (13) | −0.0068 (12) | −0.0001 (11) | −0.0077 (11) |
| C8 | 0.0322 (13) | 0.0428 (12) | 0.0399 (12) | 0.0027 (12) | −0.0059 (10) | −0.0066 (11) |
| C9 | 0.0378 (13) | 0.0321 (11) | 0.0382 (12) | 0.0045 (11) | −0.0044 (11) | −0.0013 (10) |
| C10 | 0.0364 (13) | 0.0266 (10) | 0.0378 (12) | 0.0022 (11) | −0.0010 (10) | −0.0032 (10) |
| C11 | 0.0468 (16) | 0.0319 (11) | 0.0421 (13) | 0.0018 (12) | 0.0052 (12) | 0.0025 (10) |
| C12 | 0.0490 (17) | 0.0343 (12) | 0.0592 (17) | −0.0048 (13) | 0.0064 (15) | 0.0018 (12) |
| C13 | 0.0587 (18) | 0.0461 (13) | 0.0440 (14) | 0.0098 (15) | 0.0126 (13) | 0.0034 (12) |
| C14 | 0.0554 (18) | 0.0632 (16) | 0.0472 (15) | −0.0023 (16) | 0.0081 (13) | −0.0105 (13) |
| C15 | 0.0395 (16) | 0.0745 (18) | 0.0592 (17) | −0.0019 (16) | 0.0072 (13) | −0.0018 (15) |
| C16 | 0.101 (3) | 0.0442 (14) | 0.0379 (14) | 0.0050 (17) | 0.0115 (16) | −0.0063 (12) |
| C17 | 0.074 (2) | 0.0468 (14) | 0.0460 (14) | 0.0131 (15) | −0.0078 (15) | −0.0031 (13) |
| C18 | 0.116 (3) | 0.070 (2) | 0.0428 (15) | −0.024 (2) | 0.0013 (19) | −0.0148 (15) |
| C19 | 0.081 (2) | 0.084 (2) | 0.0565 (18) | 0.019 (2) | −0.0138 (18) | −0.0114 (16) |
| C20 | 0.086 (2) | 0.091 (2) | 0.0522 (18) | −0.001 (2) | −0.0110 (17) | −0.0086 (16) |
| N1 | 0.0642 (15) | 0.0354 (10) | 0.0305 (10) | 0.0038 (11) | 0.0050 (10) | −0.0030 (9) |
| O1 | 0.0609 (12) | 0.0430 (9) | 0.0374 (9) | −0.0072 (10) | 0.0007 (9) | −0.0079 (7) |
| O2 | 0.0399 (10) | 0.0453 (9) | 0.0558 (11) | −0.0112 (9) | −0.0041 (9) | 0.0024 (8) |
| O3 | 0.0468 (11) | 0.0607 (11) | 0.0414 (9) | −0.0071 (10) | −0.0148 (8) | −0.0030 (8) |
| O4 | 0.0540 (11) | 0.0392 (8) | 0.0538 (10) | −0.0127 (9) | −0.0059 (9) | −0.0042 (8) |
| O5 | 0.0545 (13) | 0.0677 (12) | 0.0801 (14) | −0.0161 (11) | 0.0205 (12) | 0.0067 (11) |
| C1—O2 | 1.465 (3) | C11—C13 | 1.526 (3) |
| C1—C2 | 1.484 (3) | C11—H11 | 0.9800 |
| C1—C10 | 1.534 (3) | C12—O5 | 1.204 (3) |
| C1—H1 | 0.9800 | C12—O2 | 1.347 (3) |
| C2—O3 | 1.442 (3) | C13—N1 | 1.457 (3) |
| C2—C3 | 1.468 (3) | C13—H13A | 0.9700 |
| C2—H2 | 0.9800 | C13—H13B | 0.9700 |
| C3—O3 | 1.445 (3) | C14—H14A | 0.9600 |
| C3—C14 | 1.503 (4) | C14—H14B | 0.9600 |
| C3—C4 | 1.509 (3) | C14—H14C | 0.9600 |
| C4—C5 | 1.534 (4) | C15—H15A | 0.9600 |
| C4—H4A | 0.9700 | C15—H15B | 0.9600 |
| C4—H4B | 0.9700 | C15—H15C | 0.9600 |
| C5—C6 | 1.510 (3) | C16—N1 | 1.471 (3) |
| C5—H5A | 0.9700 | C16—C18 | 1.507 (5) |
| C5—H5B | 0.9700 | C16—H16A | 0.9700 |
| C6—O4 | 1.442 (3) | C16—H16B | 0.9700 |
| C6—C7 | 1.475 (3) | C17—N1 | 1.470 (3) |
| C6—H6 | 0.9800 | C17—C19 | 1.500 (4) |
| C7—O4 | 1.448 (3) | C17—H17A | 0.9700 |
| C7—C15 | 1.500 (3) | C17—H17B | 0.9700 |
| C7—C8 | 1.524 (3) | C18—C20 | 1.512 (5) |
| C8—O1 | 1.413 (3) | C18—H18A | 0.9700 |
| C8—C9 | 1.541 (3) | C18—H18B | 0.9700 |
| C8—H8 | 0.9800 | C19—C20 | 1.518 (4) |
| C9—C10 | 1.540 (3) | C19—H19A | 0.9700 |
| C9—H9A | 0.9700 | C19—H19B | 0.9700 |
| C9—H9B | 0.9700 | C20—H20A | 0.9700 |
| C10—C11 | 1.524 (3) | C20—H20B | 0.9700 |
| C10—H10 | 0.9800 | O1—H21 | 0.8200 |
| C11—C12 | 1.501 (4) | ||
| O2—C1—C2 | 106.41 (19) | C10—C11—C13 | 116.5 (2) |
| O2—C1—C10 | 105.09 (17) | C12—C11—H11 | 108.7 |
| C2—C1—C10 | 111.82 (18) | C10—C11—H11 | 108.7 |
| O2—C1—H1 | 111.1 | C13—C11—H11 | 108.7 |
| C2—C1—H1 | 111.1 | O5—C12—O2 | 120.5 (3) |
| C10—C1—H1 | 111.1 | O5—C12—C11 | 129.2 (3) |
| O3—C2—C3 | 59.51 (14) | O2—C12—C11 | 110.3 (2) |
| O3—C2—C1 | 119.48 (19) | N1—C13—C11 | 114.2 (2) |
| C3—C2—C1 | 125.9 (2) | N1—C13—H13A | 108.7 |
| O3—C2—H2 | 113.7 | C11—C13—H13A | 108.7 |
| C3—C2—H2 | 113.7 | N1—C13—H13B | 108.7 |
| C1—C2—H2 | 113.7 | C11—C13—H13B | 108.7 |
| O3—C3—C2 | 59.36 (15) | H13A—C13—H13B | 107.6 |
| O3—C3—C14 | 113.6 (2) | C3—C14—H14A | 109.5 |
| C2—C3—C14 | 123.0 (2) | C3—C14—H14B | 109.5 |
| O3—C3—C4 | 114.5 (2) | H14A—C14—H14B | 109.5 |
| C2—C3—C4 | 115.1 (2) | C3—C14—H14C | 109.5 |
| C14—C3—C4 | 117.4 (2) | H14A—C14—H14C | 109.5 |
| C3—C4—C5 | 113.8 (2) | H14B—C14—H14C | 109.5 |
| C3—C4—H4A | 108.8 | C7—C15—H15A | 109.5 |
| C5—C4—H4A | 108.8 | C7—C15—H15B | 109.5 |
| C3—C4—H4B | 108.8 | H15A—C15—H15B | 109.5 |
| C5—C4—H4B | 108.8 | C7—C15—H15C | 109.5 |
| H4A—C4—H4B | 107.7 | H15A—C15—H15C | 109.5 |
| C6—C5—C4 | 113.9 (2) | H15B—C15—H15C | 109.5 |
| C6—C5—H5A | 108.8 | N1—C16—C18 | 111.6 (2) |
| C4—C5—H5A | 108.8 | N1—C16—H16A | 109.3 |
| C6—C5—H5B | 108.8 | C18—C16—H16A | 109.3 |
| C4—C5—H5B | 108.8 | N1—C16—H16B | 109.3 |
| H5A—C5—H5B | 107.7 | C18—C16—H16B | 109.3 |
| O4—C6—C7 | 59.51 (14) | H16A—C16—H16B | 108.0 |
| O4—C6—C5 | 117.0 (2) | N1—C17—C19 | 112.9 (2) |
| C7—C6—C5 | 124.8 (2) | N1—C17—H17A | 109.0 |
| O4—C6—H6 | 114.6 | C19—C17—H17A | 109.0 |
| C7—C6—H6 | 114.6 | N1—C17—H17B | 109.0 |
| C5—C6—H6 | 114.6 | C19—C17—H17B | 109.0 |
| O4—C7—C6 | 59.12 (14) | H17A—C17—H17B | 107.8 |
| O4—C7—C15 | 112.9 (2) | C16—C18—C20 | 111.6 (3) |
| C6—C7—C15 | 122.9 (2) | C16—C18—H18A | 109.3 |
| O4—C7—C8 | 117.02 (18) | C20—C18—H18A | 109.3 |
| C6—C7—C8 | 121.5 (2) | C16—C18—H18B | 109.3 |
| C15—C7—C8 | 111.9 (2) | C20—C18—H18B | 109.3 |
| O1—C8—C7 | 110.69 (18) | H18A—C18—H18B | 108.0 |
| O1—C8—C9 | 111.89 (19) | C17—C19—C20 | 110.6 (3) |
| C7—C8—C9 | 111.75 (18) | C17—C19—H19A | 109.5 |
| O1—C8—H8 | 107.4 | C20—C19—H19A | 109.5 |
| C7—C8—H8 | 107.4 | C17—C19—H19B | 109.5 |
| C9—C8—H8 | 107.4 | C20—C19—H19B | 109.5 |
| C10—C9—C8 | 114.86 (18) | H19A—C19—H19B | 108.1 |
| C10—C9—H9A | 108.6 | C18—C20—C19 | 109.7 (2) |
| C8—C9—H9A | 108.6 | C18—C20—H20A | 109.7 |
| C10—C9—H9B | 108.6 | C19—C20—H20A | 109.7 |
| C8—C9—H9B | 108.6 | C18—C20—H20B | 109.7 |
| H9A—C9—H9B | 107.5 | C19—C20—H20B | 109.7 |
| C11—C10—C1 | 101.97 (17) | H20A—C20—H20B | 108.2 |
| C11—C10—C9 | 116.8 (2) | C13—N1—C17 | 110.5 (2) |
| C1—C10—C9 | 115.23 (19) | C13—N1—C16 | 109.5 (2) |
| C11—C10—H10 | 107.4 | C17—N1—C16 | 109.18 (19) |
| C1—C10—H10 | 107.4 | C8—O1—H21 | 109.5 |
| C9—C10—H10 | 107.4 | C12—O2—C1 | 110.24 (19) |
| C12—C11—C10 | 103.16 (19) | C2—O3—C3 | 61.13 (14) |
| C12—C11—C13 | 110.6 (2) | C6—O4—C7 | 61.38 (15) |
| H··· | ||||
| O1—H21···N1 | 0.82 | 2.11 | 2.927 (2) | 174 |
| C1—H1···O5i | 0.98 | 2.47 | 3.322 (3) | 146 |
| C10—H10···O4ii | 0.98 | 2.42 | 3.325 (3) | 153 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H21⋯N1 | 0.82 | 2.11 | 2.927 (2) | 174 |
| C1—H1⋯O5i | 0.98 | 2.47 | 3.322 (3) | 146 |
| C10—H10⋯O4ii | 0.98 | 2.42 | 3.325 (3) | 153 |
Symmetry codes: (i) ; (ii) .