Literature DB >> 21588699

Quinoline-2-carbonitrile-fumaric acid (1/0.5).

Wan-Sin Loh1, Ching Kheng Quah, Madhukar Hemamalini, Hoong-Kun Fun.   

Abstract

The asymmetric unit of the title compound, C(10)H(6)N(2)·0.5C(4)H(4)O(4), consists of one quinoline-2-carbonitrile mol-ecule and a half-mol-ecule of fumaric acid, which lies on an inversion center. The quinoline-2-carbonitrile mol-ecule is almost planar, with an r.m.s. deviation of 0.008 (1) Å. The acid and base are linked together via pairs of inter-molecular C-H⋯O and O-H⋯N hydrogen bonds, forming R(2) (2)(8) ring motifs. In the crystal, the carbonitrile mol-ecules are further linked by inter-molecular C-H⋯N hydrogen bonds, generating R(2) (2)(10) ring motifs, resulting in zigzag chains running along the c axis.

Entities:  

Year:  2010        PMID: 21588699      PMCID: PMC3008075          DOI: 10.1107/S1600536810032745

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity and syntheses of quinoline derivatives, see: Sasaki et al. (1998 ▶); Reux et al. (2009 ▶). For related structures, see: Loh, Fun et al. (2010 ▶); Loh, Quah et al. (2010 ▶); Quah et al. (2010 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶). For reference bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C10H6N2·0.5C4H4O4 M = 212.20 Monoclinic, a = 3.7239 (1) Å b = 19.1958 (3) Å c = 13.6454 (2) Å β = 93.805 (1)° V = 973.27 (3) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 100 K 0.17 × 0.15 × 0.09 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.983, T max = 0.991 10682 measured reflections 2566 independent reflections 1983 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.128 S = 1.06 2566 reflections 149 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.37 e Å−3 Δρmin = −0.26 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810032745/wn2403sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810032745/wn2403Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H6N2·0.5C4H4O4F(000) = 440
Mr = 212.20Dx = 1.448 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3503 reflections
a = 3.7239 (1) Åθ = 2.6–30.1°
b = 19.1958 (3) ŵ = 0.10 mm1
c = 13.6454 (2) ÅT = 100 K
β = 93.805 (1)°Block, colourless
V = 973.27 (3) Å30.17 × 0.15 × 0.09 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer2566 independent reflections
Radiation source: fine-focus sealed tube1983 reflections with I > 2σ(I)
graphiteRint = 0.032
φ and ω scansθmax = 29.0°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −5→5
Tmin = 0.983, Tmax = 0.991k = −26→21
10682 measured reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.128H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.0637P)2 + 0.2928P] where P = (Fo2 + 2Fc2)/3
2566 reflections(Δ/σ)max < 0.001
149 parametersΔρmax = 0.37 e Å3
0 restraintsΔρmin = −0.26 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.1218 (3)0.38047 (6)0.42628 (8)0.0239 (3)
O20.3112 (3)0.45849 (6)0.31757 (7)0.0191 (3)
C110.0375 (4)0.50196 (8)0.45325 (10)0.0161 (3)
H11A0.01410.54450.42090.019*
C120.1585 (4)0.43988 (8)0.39883 (10)0.0153 (3)
H1O20.393 (6)0.4215 (12)0.2830 (15)0.042 (6)*
C70.7889 (4)0.28524 (8)0.03215 (10)0.0168 (3)
H7A0.85930.2596−0.02110.020*
C80.8084 (4)0.35628 (8)0.03082 (10)0.0170 (3)
H8A0.89020.3798−0.02290.020*
C90.7002 (4)0.39284 (8)0.11370 (10)0.0155 (3)
C100.7209 (4)0.46837 (8)0.11449 (10)0.0179 (3)
N10.5786 (3)0.36333 (6)0.19310 (8)0.0146 (3)
N20.7411 (4)0.52815 (7)0.11298 (10)0.0252 (3)
C10.5589 (4)0.29220 (8)0.19492 (10)0.0148 (3)
C20.4324 (4)0.25919 (8)0.27928 (10)0.0162 (3)
H2A0.36410.28570.33190.019*
C30.4121 (4)0.18825 (8)0.28244 (11)0.0179 (3)
H3A0.33080.16680.33790.021*
C40.5123 (4)0.14668 (8)0.20288 (11)0.0191 (3)
H4A0.49700.09840.20670.023*
C50.6316 (4)0.17730 (8)0.12047 (11)0.0183 (3)
H5A0.69330.14980.06800.022*
C60.6612 (4)0.25059 (8)0.11479 (10)0.0155 (3)
U11U22U33U12U13U23
O10.0376 (7)0.0139 (6)0.0214 (5)0.0008 (5)0.0117 (5)0.0000 (4)
O20.0273 (6)0.0154 (6)0.0155 (5)0.0003 (5)0.0075 (4)−0.0023 (4)
C110.0202 (7)0.0116 (7)0.0168 (7)0.0001 (6)0.0033 (6)−0.0014 (5)
C120.0171 (7)0.0159 (7)0.0130 (6)−0.0005 (6)0.0013 (5)−0.0005 (5)
C70.0169 (7)0.0205 (8)0.0130 (6)0.0027 (6)0.0013 (5)−0.0023 (5)
C80.0173 (7)0.0201 (8)0.0139 (6)0.0006 (6)0.0032 (5)0.0012 (5)
C90.0159 (7)0.0156 (8)0.0149 (6)0.0004 (6)0.0010 (5)0.0010 (5)
C100.0193 (7)0.0200 (8)0.0145 (6)−0.0002 (6)0.0029 (5)0.0015 (6)
N10.0172 (6)0.0128 (6)0.0139 (6)0.0006 (5)0.0016 (5)0.0005 (5)
N20.0335 (8)0.0183 (7)0.0245 (7)−0.0010 (6)0.0062 (6)0.0020 (6)
C10.0167 (7)0.0143 (7)0.0136 (6)0.0010 (6)0.0017 (5)−0.0002 (5)
C20.0195 (7)0.0165 (8)0.0129 (6)0.0008 (6)0.0024 (5)−0.0004 (5)
C30.0198 (7)0.0173 (8)0.0166 (7)−0.0007 (6)0.0017 (6)0.0024 (6)
C40.0221 (8)0.0126 (7)0.0223 (7)−0.0003 (6)0.0002 (6)−0.0005 (6)
C50.0219 (7)0.0162 (8)0.0170 (7)0.0017 (6)0.0017 (6)−0.0043 (6)
C60.0159 (7)0.0163 (8)0.0142 (6)0.0010 (6)0.0010 (5)−0.0015 (5)
O1—C121.2108 (18)C10—N21.150 (2)
O2—C121.3281 (16)N1—C11.3676 (19)
O2—H1O20.92 (2)C1—C21.4214 (19)
C11—C11i1.326 (3)C1—C61.4262 (19)
C11—C121.489 (2)C2—C31.365 (2)
C11—H11A0.9300C2—H2A0.9300
C7—C81.366 (2)C3—C41.417 (2)
C7—C61.4181 (19)C3—H3A0.9300
C7—H7A0.9300C4—C51.369 (2)
C8—C91.4121 (19)C4—H4A0.9300
C8—H8A0.9300C5—C61.414 (2)
C9—N11.3287 (17)C5—H5A0.9300
C9—C101.452 (2)
C12—O2—H1O2113.4 (14)N1—C1—C2118.74 (12)
C11i—C11—C12121.62 (18)N1—C1—C6121.86 (12)
C11i—C11—H11A119.2C2—C1—C6119.40 (13)
C12—C11—H11A119.2C3—C2—C1119.51 (13)
O1—C12—O2125.09 (13)C3—C2—H2A120.2
O1—C12—C11123.72 (13)C1—C2—H2A120.2
O2—C12—C11111.19 (12)C2—C3—C4121.31 (13)
C8—C7—C6119.98 (13)C2—C3—H3A119.3
C8—C7—H7A120.0C4—C3—H3A119.3
C6—C7—H7A120.0C5—C4—C3120.25 (14)
C7—C8—C9117.87 (13)C5—C4—H4A119.9
C7—C8—H8A121.1C3—C4—H4A119.9
C9—C8—H8A121.1C4—C5—C6120.21 (13)
N1—C9—C8124.88 (14)C4—C5—H5A119.9
N1—C9—C10116.13 (12)C6—C5—H5A119.9
C8—C9—C10118.98 (12)C5—C6—C7122.80 (13)
N2—C10—C9178.33 (15)C5—C6—C1119.31 (12)
C9—N1—C1117.52 (12)C7—C6—C1117.89 (13)
C11i—C11—C12—O117.0 (3)C1—C2—C3—C4−0.4 (2)
C11i—C11—C12—O2−162.72 (18)C2—C3—C4—C5−0.2 (2)
C6—C7—C8—C90.3 (2)C3—C4—C5—C61.0 (2)
C7—C8—C9—N1−0.4 (2)C4—C5—C6—C7178.87 (14)
C7—C8—C9—C10179.54 (14)C4—C5—C6—C1−1.2 (2)
C8—C9—N1—C10.5 (2)C8—C7—C6—C5179.47 (14)
C10—C9—N1—C1−179.45 (13)C8—C7—C6—C1−0.4 (2)
C9—N1—C1—C2179.50 (13)N1—C1—C6—C5−179.37 (14)
C9—N1—C1—C6−0.5 (2)C2—C1—C6—C50.6 (2)
N1—C1—C2—C3−179.81 (14)N1—C1—C6—C70.5 (2)
C6—C1—C2—C30.2 (2)C2—C1—C6—C7−179.50 (13)
D—H···AD—HH···AD···AD—H···A
O2—H1O2···N10.92 (2)1.83 (2)2.7272 (16)167 (2)
C2—H2A···O10.932.443.3300 (19)161.
C8—H8A···N2ii0.932.603.467 (2)156.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H1O2⋯N10.92 (2)1.83 (2)2.7272 (16)167 (2)
C2—H2A⋯O10.932.443.3300 (19)161
C8—H8A⋯N2i0.932.603.467 (2)156

Symmetry code: (i) .

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