Literature DB >> 21588617

8-Hy-droxy-quinolinium 2-carb-oxy-acetate.

Ching Kheng Quah1, Wan-Sin Loh, Madhukar Hemamalini, Hoong-Kun Fun.   

Abstract

In the title compound, C(9)H(8)NO(+)·C(3)H(3)O(4) (-), the cation and anion are each essentially planar, with maximum deviations of 0.043 (1) and 0.060 (1) Å, respectively. The dihedral angle between these two planes is 2.20 (4)°. The conformation of the anion is stabilized by an intra-molecular O-H⋯O hydrogen bond, which forms an S(6) ring motif. The hy-droxy group of the oxine unit makes a hydrogen bond with the one of the O atoms of the carboxyl-ate group of the 2-carb-oxy-acetate anion. Two other carboxyl-ate O atoms form R(2) (2)(7) ring motifs via inter-molecular C-H⋯O and N-H⋯O hydrogen bonds. The crystal structure is consolidated by weak inter-molecular C-H⋯O inter-actions, which link the cations and anions into a three-dimensional network.

Entities:  

Year:  2010        PMID: 21588617      PMCID: PMC3007886          DOI: 10.1107/S1600536810030990

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to and the biological activity of oxines, see: Balasubramanian & Muthiah (1996a ▶,b ▶). For related structures, see: Banerjee et al. (1984 ▶); Loh et al. (2010 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶). For bond-length data, see: Allen et al. (1987 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C9H8NOC3H3O4 M = 249.22 Monoclinic, a = 8.7089 (4) Å b = 5.2930 (2) Å c = 23.4672 (9) Å β = 90.999 (3)° V = 1081.58 (8) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 100 K 0.52 × 0.17 × 0.07 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.929, T max = 0.992 12061 measured reflections 3170 independent reflections 2552 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.118 S = 1.04 3170 reflections 207 parameters All H-atom parameters refined Δρmax = 0.33 e Å−3 Δρmin = −0.29 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810030990/bt5313sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810030990/bt5313Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H8NO+·C3H3O4F(000) = 520
Mr = 249.22Dx = 1.530 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3422 reflections
a = 8.7089 (4) Åθ = 3.5–30.0°
b = 5.2930 (2) ŵ = 0.12 mm1
c = 23.4672 (9) ÅT = 100 K
β = 90.999 (3)°Plate, yellow
V = 1081.58 (8) Å30.52 × 0.17 × 0.07 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer3170 independent reflections
Radiation source: fine-focus sealed tube2552 reflections with I > 2σ(I)
graphiteRint = 0.041
φ and ω scansθmax = 30.1°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −11→12
Tmin = 0.929, Tmax = 0.992k = −7→7
12061 measured reflectionsl = −33→32
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.118All H-atom parameters refined
S = 1.04w = 1/[σ2(Fo2) + (0.0618P)2 + 0.2285P] where P = (Fo2 + 2Fc2)/3
3170 reflections(Δ/σ)max < 0.001
207 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = −0.29 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.09573 (11)0.85826 (16)0.23539 (4)0.0178 (2)
N10.16598 (13)0.89411 (19)0.12400 (4)0.0152 (2)
C10.23458 (14)0.7104 (2)0.15690 (5)0.0142 (2)
C20.19403 (16)0.9186 (2)0.06877 (5)0.0183 (3)
C30.29489 (16)0.7560 (3)0.04150 (5)0.0204 (3)
C40.36509 (16)0.5673 (2)0.07247 (5)0.0201 (3)
C50.33690 (14)0.5386 (2)0.13142 (5)0.0165 (2)
C60.40592 (15)0.3468 (2)0.16573 (6)0.0193 (3)
C70.37370 (15)0.3379 (2)0.22279 (6)0.0193 (3)
C80.27372 (15)0.5121 (2)0.24808 (5)0.0172 (2)
C90.19971 (14)0.6941 (2)0.21562 (5)0.0144 (2)
O20.79886 (13)0.74847 (19)0.03808 (4)0.0268 (2)
O30.66717 (12)0.95987 (18)0.10240 (4)0.0237 (2)
O40.96190 (11)0.38081 (17)0.06705 (4)0.0208 (2)
O50.97057 (11)0.25359 (16)0.15766 (3)0.0177 (2)
C100.75145 (15)0.7864 (2)0.09062 (5)0.0176 (2)
C110.80638 (16)0.5972 (2)0.13524 (5)0.0195 (3)
C120.92134 (14)0.3958 (2)0.11786 (5)0.0155 (2)
H1O10.073 (2)0.817 (4)0.2748 (9)0.042 (5)*
H1O20.866 (3)0.602 (4)0.0417 (9)0.057 (6)*
H1N10.098 (2)1.015 (4)0.1398 (8)0.037 (5)*
H2A0.141 (2)1.051 (3)0.0516 (7)0.022 (4)*
H3A0.3100 (19)0.781 (3)0.0005 (7)0.023 (4)*
H4A0.437 (2)0.447 (3)0.0560 (7)0.027 (4)*
H6A0.4720 (18)0.226 (3)0.1476 (7)0.019 (4)*
H7A0.4224 (19)0.207 (3)0.2466 (7)0.024 (4)*
H8A0.2547 (19)0.505 (3)0.2888 (7)0.020 (4)*
H11A0.716 (2)0.510 (4)0.1503 (8)0.039 (5)*
H11B0.852 (2)0.689 (4)0.1680 (8)0.035 (5)*
U11U22U33U12U13U23
O10.0235 (5)0.0173 (4)0.0128 (4)0.0039 (4)0.0051 (3)0.0010 (3)
N10.0187 (5)0.0143 (4)0.0128 (5)−0.0006 (4)0.0020 (4)−0.0003 (4)
C10.0153 (6)0.0129 (5)0.0146 (5)−0.0014 (4)0.0013 (4)−0.0008 (4)
C20.0229 (7)0.0186 (6)0.0135 (5)−0.0009 (5)0.0017 (4)0.0008 (4)
C30.0242 (7)0.0240 (6)0.0130 (5)−0.0009 (5)0.0041 (5)−0.0016 (5)
C40.0201 (7)0.0213 (6)0.0191 (6)0.0009 (5)0.0047 (5)−0.0045 (5)
C50.0159 (6)0.0160 (5)0.0178 (6)−0.0018 (4)0.0017 (4)−0.0016 (4)
C60.0170 (6)0.0161 (5)0.0248 (6)0.0015 (5)0.0016 (5)−0.0018 (5)
C70.0180 (6)0.0160 (5)0.0239 (6)0.0005 (5)−0.0007 (5)0.0035 (5)
C80.0186 (6)0.0169 (5)0.0160 (5)−0.0024 (5)0.0007 (4)0.0019 (4)
C90.0161 (6)0.0136 (5)0.0137 (5)−0.0022 (4)0.0023 (4)0.0002 (4)
O20.0417 (7)0.0242 (5)0.0146 (4)0.0117 (4)0.0046 (4)0.0025 (4)
O30.0263 (5)0.0216 (5)0.0232 (5)0.0067 (4)0.0009 (4)−0.0014 (4)
O40.0293 (5)0.0205 (4)0.0127 (4)0.0049 (4)0.0051 (3)0.0001 (3)
O50.0228 (5)0.0175 (4)0.0128 (4)0.0018 (3)0.0023 (3)0.0008 (3)
C100.0197 (6)0.0170 (5)0.0160 (5)0.0001 (5)0.0005 (4)−0.0009 (4)
C110.0241 (7)0.0211 (6)0.0132 (5)0.0055 (5)0.0040 (5)0.0008 (4)
C120.0178 (6)0.0149 (5)0.0139 (5)−0.0023 (4)0.0015 (4)−0.0013 (4)
O1—C91.3434 (15)C6—H6A0.963 (17)
O1—H1O10.97 (2)C7—C81.4066 (18)
N1—C21.3295 (15)C7—H7A0.981 (17)
N1—C11.3722 (15)C8—C91.3811 (17)
N1—H1N10.95 (2)C8—H8A0.973 (16)
C1—C51.4132 (17)O2—C101.3223 (15)
C1—C91.4187 (16)O2—H1O20.97 (2)
C2—C31.3933 (18)O3—C101.2107 (16)
C2—H2A0.928 (17)O4—C121.2521 (14)
C3—C41.3727 (19)O5—C121.2683 (14)
C3—H3A0.982 (16)C10—C111.5198 (17)
C4—C51.4174 (17)C11—C121.5231 (17)
C4—H4A0.977 (18)C11—H11A0.98 (2)
C5—C61.4222 (17)C11—H11B0.990 (19)
C6—C71.3736 (18)
C9—O1—H1O1109.3 (12)C6—C7—C8121.81 (12)
C2—N1—C1122.14 (11)C6—C7—H7A119.1 (10)
C2—N1—H1N1116.1 (11)C8—C7—H7A119.1 (10)
C1—N1—H1N1121.7 (11)C9—C8—C7120.74 (11)
N1—C1—C5119.31 (10)C9—C8—H8A118.7 (10)
N1—C1—C9119.40 (10)C7—C8—H8A120.5 (10)
C5—C1—C9121.28 (11)O1—C9—C8124.86 (11)
N1—C2—C3121.04 (12)O1—C9—C1116.96 (10)
N1—C2—H2A113.5 (10)C8—C9—C1118.17 (11)
C3—C2—H2A125.5 (10)C10—O2—H1O2103.7 (13)
C4—C3—C2119.00 (11)O3—C10—O2121.90 (12)
C4—C3—H3A123.3 (10)O3—C10—C11121.81 (11)
C2—C3—H3A117.6 (10)O2—C10—C11116.29 (11)
C3—C4—C5120.77 (12)C10—C11—C12118.50 (10)
C3—C4—H4A123.2 (10)C10—C11—H11A108.4 (12)
C5—C4—H4A116.1 (10)C12—C11—H11A107.4 (12)
C1—C5—C4117.72 (11)C10—C11—H11B109.3 (11)
C1—C5—C6118.88 (11)C12—C11—H11B107.1 (11)
C4—C5—C6123.40 (12)H11A—C11—H11B105.5 (16)
C7—C6—C5119.01 (12)O4—C12—O5124.50 (11)
C7—C6—H6A122.8 (9)O4—C12—C11119.80 (11)
C5—C6—H6A118.2 (9)O5—C12—C11115.70 (10)
C2—N1—C1—C5−0.90 (18)C5—C6—C7—C80.37 (19)
C2—N1—C1—C9−179.97 (11)C6—C7—C8—C92.3 (2)
C1—N1—C2—C30.34 (19)C7—C8—C9—O1175.89 (11)
N1—C2—C3—C40.4 (2)C7—C8—C9—C1−3.83 (18)
C2—C3—C4—C5−0.5 (2)N1—C1—C9—O12.09 (16)
N1—C1—C5—C40.71 (17)C5—C1—C9—O1−176.97 (11)
C9—C1—C5—C4179.77 (11)N1—C1—C9—C8−178.17 (11)
N1—C1—C5—C6−179.22 (11)C5—C1—C9—C82.77 (18)
C9—C1—C5—C6−0.16 (18)O3—C10—C11—C12−175.64 (12)
C3—C4—C5—C1−0.01 (19)O2—C10—C11—C125.39 (18)
C3—C4—C5—C6179.92 (13)C10—C11—C12—O4−3.81 (18)
C1—C5—C6—C7−1.42 (18)C10—C11—C12—O5175.62 (11)
C4—C5—C6—C7178.66 (12)
D—H···AD—HH···AD···AD—H···A
O1—H1O1···O5i0.97 (2)1.67 (2)2.6439 (12)178.1 (14)
O2—H1O2···O40.97 (2)1.55 (2)2.4963 (14)162 (2)
N1—H1N1···O5ii0.95 (2)1.74 (2)2.6809 (14)170.9 (17)
C2—H2A···O4ii0.928 (16)2.373 (17)3.1735 (15)144.4 (14)
C2—H2A···O2iii0.928 (16)2.423 (16)3.0663 (15)126.5 (13)
C6—H6A···O3iv0.964 (16)2.462 (16)3.4202 (16)172.5 (13)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1O1⋯O5i0.97 (2)1.67 (2)2.6439 (12)178.1 (14)
O2—H1O2⋯O40.97 (2)1.55 (2)2.4963 (14)162 (2)
N1—H1N1⋯O5ii0.95 (2)1.74 (2)2.6809 (14)170.9 (17)
C2—H2A⋯O4ii0.928 (16)2.373 (17)3.1735 (15)144.4 (14)
C2—H2A⋯O2iii0.928 (16)2.423 (16)3.0663 (15)126.5 (13)
C6—H6A⋯O3iv0.964 (16)2.462 (16)3.4202 (16)172.5 (13)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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1.  Quinoline-2-carbonitrile-fumaric acid (1/0.5).

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