| Literature DB >> 21588937 |
Wan-Sin Loh1, Madhukar Hemamalini, Hoong-Kun Fun.
Abstract
A proton is transferred from the nitric acid to the N atom ofEntities:
Year: 2010 PMID: 21588937 PMCID: PMC3009375 DOI: 10.1107/S1600536810039243
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H7N2+·NO3− | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 3861 reflections |
| θ = 2.7–31.0° | |
| µ = 0.12 mm−1 | |
| β = 95.802 (1)° | Plate, colourless |
| 0.44 × 0.18 × 0.07 mm | |
| Bruker SMART APEXII CCD diffractometer | 2758 independent reflections |
| Radiation source: fine-focus sealed tube | 2103 reflections with |
| graphite | |
| φ and ω scans | θmax = 30.0°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 16184 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2758 reflections | (Δ/σ)max < 0.001 |
| 170 parameters | Δρmax = 0.37 e Å−3 |
| 0 restraints | Δρmin = −0.29 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.1851 (3) | 0.21342 (6) | 0.92466 (7) | 0.0314 (3) | |
| O2 | 0.4106 (3) | 0.10064 (5) | 0.91484 (7) | 0.0255 (3) | |
| O3 | 0.4296 (3) | 0.17922 (5) | 0.80150 (6) | 0.0258 (3) | |
| N1 | 0.2524 (3) | 0.30942 (6) | 0.73844 (7) | 0.0144 (2) | |
| H1N1 | 0.3241 | 0.2630 | 0.7672 | 0.079 (8)* | |
| N2 | −0.1335 (4) | 0.17939 (7) | 0.58610 (8) | 0.0265 (3) | |
| N3 | 0.3373 (3) | 0.16413 (6) | 0.88321 (7) | 0.0196 (3) | |
| C1 | 0.3582 (3) | 0.37566 (7) | 0.78076 (8) | 0.0142 (3) | |
| C2 | 0.5593 (4) | 0.37429 (7) | 0.86850 (8) | 0.0161 (3) | |
| C3 | 0.6627 (4) | 0.44133 (7) | 0.90990 (9) | 0.0176 (3) | |
| C4 | 0.5697 (4) | 0.51140 (7) | 0.86660 (9) | 0.0181 (3) | |
| C5 | 0.3739 (4) | 0.51378 (7) | 0.78226 (9) | 0.0175 (3) | |
| C6 | 0.2637 (3) | 0.44559 (7) | 0.73637 (8) | 0.0148 (3) | |
| C7 | 0.0675 (4) | 0.44419 (7) | 0.64838 (9) | 0.0176 (3) | |
| C8 | −0.0316 (4) | 0.37627 (7) | 0.60703 (9) | 0.0175 (3) | |
| C9 | 0.0658 (4) | 0.30972 (7) | 0.65509 (8) | 0.0158 (3) | |
| C10 | −0.0406 (4) | 0.23670 (7) | 0.61661 (9) | 0.0184 (3) | |
| H2A | 0.619 (4) | 0.3267 (9) | 0.8975 (11) | 0.020 (4)* | |
| H3A | 0.805 (5) | 0.4406 (9) | 0.9717 (12) | 0.023 (4)* | |
| H4A | 0.649 (5) | 0.5595 (10) | 0.8975 (11) | 0.028 (4)* | |
| H5A | 0.304 (5) | 0.5598 (9) | 0.7531 (11) | 0.024 (4)* | |
| H7A | 0.002 (4) | 0.4918 (9) | 0.6174 (11) | 0.020 (4)* | |
| H8A | −0.166 (5) | 0.3735 (10) | 0.5461 (13) | 0.030 (4)* |
| O1 | 0.0486 (7) | 0.0188 (5) | 0.0295 (6) | 0.0018 (5) | 0.0167 (5) | −0.0018 (4) |
| O2 | 0.0375 (6) | 0.0142 (5) | 0.0234 (5) | −0.0007 (4) | −0.0040 (4) | 0.0047 (4) |
| O3 | 0.0438 (7) | 0.0173 (5) | 0.0170 (5) | 0.0075 (4) | 0.0072 (4) | 0.0026 (4) |
| N1 | 0.0169 (6) | 0.0120 (5) | 0.0142 (5) | 0.0006 (4) | 0.0010 (4) | 0.0000 (4) |
| N2 | 0.0331 (7) | 0.0217 (6) | 0.0237 (6) | −0.0029 (5) | −0.0020 (5) | −0.0014 (5) |
| N3 | 0.0255 (6) | 0.0153 (5) | 0.0172 (5) | −0.0027 (4) | −0.0015 (4) | −0.0003 (4) |
| C1 | 0.0146 (6) | 0.0126 (6) | 0.0159 (6) | 0.0002 (4) | 0.0035 (5) | −0.0005 (4) |
| C2 | 0.0180 (6) | 0.0145 (6) | 0.0156 (6) | 0.0004 (5) | 0.0013 (5) | 0.0005 (4) |
| C3 | 0.0164 (6) | 0.0187 (6) | 0.0177 (6) | −0.0017 (5) | 0.0020 (5) | −0.0024 (5) |
| C4 | 0.0180 (7) | 0.0151 (6) | 0.0216 (6) | −0.0035 (5) | 0.0044 (5) | −0.0037 (5) |
| C5 | 0.0200 (7) | 0.0128 (6) | 0.0204 (6) | 0.0002 (5) | 0.0053 (5) | 0.0002 (5) |
| C6 | 0.0146 (6) | 0.0140 (6) | 0.0160 (6) | 0.0009 (4) | 0.0027 (5) | 0.0008 (4) |
| C7 | 0.0185 (7) | 0.0166 (6) | 0.0177 (6) | 0.0030 (5) | 0.0023 (5) | 0.0023 (5) |
| C8 | 0.0179 (6) | 0.0192 (6) | 0.0153 (6) | 0.0016 (5) | 0.0008 (5) | 0.0009 (5) |
| C9 | 0.0157 (6) | 0.0159 (6) | 0.0158 (6) | −0.0003 (5) | 0.0017 (5) | −0.0016 (4) |
| C10 | 0.0190 (7) | 0.0192 (6) | 0.0166 (6) | 0.0004 (5) | 0.0003 (5) | 0.0005 (5) |
| O1—N3 | 1.2301 (15) | C3—H3A | 0.998 (17) |
| O2—N3 | 1.2347 (14) | C4—C5 | 1.3646 (19) |
| O3—N3 | 1.3015 (14) | C4—H4A | 0.993 (18) |
| N1—C9 | 1.3370 (16) | C5—C6 | 1.4203 (17) |
| N1—C1 | 1.3642 (15) | C5—H5A | 0.943 (17) |
| N1—H1N1 | 0.9481 | C6—C7 | 1.4104 (18) |
| N2—C10 | 1.1466 (18) | C7—C8 | 1.3784 (18) |
| C1—C2 | 1.4152 (17) | C7—H7A | 0.976 (17) |
| C1—C6 | 1.4243 (16) | C8—C9 | 1.3998 (18) |
| C2—C3 | 1.3686 (18) | C8—H8A | 0.977 (18) |
| C2—H2A | 0.959 (16) | C9—C10 | 1.4480 (18) |
| C3—C4 | 1.4188 (18) | ||
| C9—N1—C1 | 120.45 (10) | C3—C4—H4A | 119.9 (10) |
| C9—N1—H1N1 | 120.2 | C4—C5—C6 | 120.01 (12) |
| C1—N1—H1N1 | 119.3 | C4—C5—H5A | 122.1 (10) |
| O1—N3—O2 | 123.76 (12) | C6—C5—H5A | 117.9 (10) |
| O1—N3—O3 | 118.74 (11) | C7—C6—C5 | 122.77 (11) |
| O2—N3—O3 | 117.50 (11) | C7—C6—C1 | 118.63 (11) |
| N1—C1—C2 | 119.72 (11) | C5—C6—C1 | 118.60 (12) |
| N1—C1—C6 | 119.68 (11) | C8—C7—C6 | 120.25 (12) |
| C2—C1—C6 | 120.60 (11) | C8—C7—H7A | 120.5 (10) |
| C3—C2—C1 | 118.87 (12) | C6—C7—H7A | 119.2 (10) |
| C3—C2—H2A | 121.7 (10) | C7—C8—C9 | 118.10 (12) |
| C1—C2—H2A | 119.4 (10) | C7—C8—H8A | 122.1 (10) |
| C2—C3—C4 | 121.13 (12) | C9—C8—H8A | 119.8 (10) |
| C2—C3—H3A | 119.1 (9) | N1—C9—C8 | 122.87 (11) |
| C4—C3—H3A | 119.8 (9) | N1—C9—C10 | 116.40 (11) |
| C5—C4—C3 | 120.79 (12) | C8—C9—C10 | 120.72 (12) |
| C5—C4—H4A | 119.3 (10) | N2—C10—C9 | 178.33 (15) |
| C9—N1—C1—C2 | −179.23 (11) | C2—C1—C6—C7 | 179.11 (11) |
| C9—N1—C1—C6 | 1.04 (18) | N1—C1—C6—C5 | 179.37 (11) |
| N1—C1—C2—C3 | −179.94 (12) | C2—C1—C6—C5 | −0.36 (18) |
| C6—C1—C2—C3 | −0.21 (19) | C5—C6—C7—C8 | 179.86 (12) |
| C1—C2—C3—C4 | 0.39 (19) | C1—C6—C7—C8 | 0.40 (19) |
| C2—C3—C4—C5 | 0.0 (2) | C6—C7—C8—C9 | 0.44 (19) |
| C3—C4—C5—C6 | −0.6 (2) | C1—N1—C9—C8 | −0.16 (19) |
| C4—C5—C6—C7 | −178.69 (12) | C1—N1—C9—C10 | −178.81 (11) |
| C4—C5—C6—C1 | 0.76 (19) | C7—C8—C9—N1 | −0.6 (2) |
| N1—C1—C6—C7 | −1.15 (18) | C7—C8—C9—C10 | 177.99 (12) |
| H··· | ||||
| N1—H1N1···O1 | 0.95 | 2.56 | 3.2376 (15) | 128 |
| N1—H1N1···O3 | 0.95 | 1.60 | 2.5432 (14) | 172 |
| C5—H5A···O3i | 0.943 (16) | 2.497 (16) | 3.2835 (16) | 141.0 (15) |
| C7—H7A···O2ii | 0.976 (16) | 2.473 (16) | 3.3641 (16) | 151.8 (12) |
| C8—H8A···O2iii | 0.977 (18) | 2.391 (19) | 3.3355 (17) | 162.4 (15) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.95 | 2.56 | 3.2376 (15) | 128 |
| N1—H1 | 0.95 | 1.60 | 2.5432 (14) | 172 |
| C5—H5 | 0.943 (16) | 2.497 (16) | 3.2835 (16) | 141.0 (15) |
| C7—H7 | 0.976 (16) | 2.473 (16) | 3.3641 (16) | 151.8 (12) |
| C8—H8 | 0.977 (18) | 2.391 (19) | 3.3355 (17) | 162.4 (15) |
Symmetry codes: (i) ; (ii) ; (iii) .