Literature DB >> 21588937

2-Cyano-quinolin-1-ium nitrate.

Wan-Sin Loh1, Madhukar Hemamalini, Hoong-Kun Fun.   

Abstract

A proton is transferred from the nitric acid to the N atom of n class="Chemical">2-cyano-quinoline during crystallization, resulting in the formation of the title salt, C(10)H(7)N(2) (+)·NO(3) (-). The quinolinium ring system is approximately planar, with a maximum deviation of 0.013 (3) Å. In the crystal, a very asymmetric bifurcated N-H⋯(O,O) hydrogen bond to two O atoms of an adjacent nitrate anion occurs, generating an R(2) (1)(4) ring motif. C-H⋯O hydrogen bonds link the ions into sheets stacking along the a axis.

Entities:  

Year:  2010        PMID: 21588937      PMCID: PMC3009375          DOI: 10.1107/S1600536810039243

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to and the biological activities of quinoline derivatives, see: Loh, Quah et al. (2010a ▶,b ▶); Loh et al. (2010 ▶); Sasaki et al. (1998 ▶); Reux et al. (2009 ▶); Morimoto et al. (1991 ▶); Michael (1997 ▶); Markees et al. (1970 ▶); Campbell et al. (1988 ▶). For the hydrogen-bond motif, see: Bernstein et al. (1995 ▶). For related structures, see: Loh, Quah et al. (2010a ▶,b ▶); Loh et al. (2010 ▶). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C10H7N2NO3 M = 217.19 Monoclinic, a = 3.6969 (1) Å b = 17.7031 (3) Å c = 14.6029 (2) Å β = 95.802 (1)° V = 950.81 (3) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 100 K 0.44 × 0.18 × 0.07 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.951, T max = 0.992 16184 measured reflections 2758 independent reflections 2103 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.122 S = 1.05 2758 reflections 170 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.37 e Å−3 Δρmin = −0.29 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810039243/hb5669sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810039243/hb5669Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H7N2+·NO3F(000) = 448
Mr = 217.19Dx = 1.517 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3861 reflections
a = 3.6969 (1) Åθ = 2.7–31.0°
b = 17.7031 (3) ŵ = 0.12 mm1
c = 14.6029 (2) ÅT = 100 K
β = 95.802 (1)°Plate, colourless
V = 950.81 (3) Å30.44 × 0.18 × 0.07 mm
Z = 4
Bruker SMART APEXII CCD diffractometer2758 independent reflections
Radiation source: fine-focus sealed tube2103 reflections with I > 2σ(I)
graphiteRint = 0.041
φ and ω scansθmax = 30.0°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −5→5
Tmin = 0.951, Tmax = 0.992k = −24→24
16184 measured reflectionsl = −20→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.122H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0614P)2 + 0.2227P] where P = (Fo2 + 2Fc2)/3
2758 reflections(Δ/σ)max < 0.001
170 parametersΔρmax = 0.37 e Å3
0 restraintsΔρmin = −0.29 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.1851 (3)0.21342 (6)0.92466 (7)0.0314 (3)
O20.4106 (3)0.10064 (5)0.91484 (7)0.0255 (3)
O30.4296 (3)0.17922 (5)0.80150 (6)0.0258 (3)
N10.2524 (3)0.30942 (6)0.73844 (7)0.0144 (2)
H1N10.32410.26300.76720.079 (8)*
N2−0.1335 (4)0.17939 (7)0.58610 (8)0.0265 (3)
N30.3373 (3)0.16413 (6)0.88321 (7)0.0196 (3)
C10.3582 (3)0.37566 (7)0.78076 (8)0.0142 (3)
C20.5593 (4)0.37429 (7)0.86850 (8)0.0161 (3)
C30.6627 (4)0.44133 (7)0.90990 (9)0.0176 (3)
C40.5697 (4)0.51140 (7)0.86660 (9)0.0181 (3)
C50.3739 (4)0.51378 (7)0.78226 (9)0.0175 (3)
C60.2637 (3)0.44559 (7)0.73637 (8)0.0148 (3)
C70.0675 (4)0.44419 (7)0.64838 (9)0.0176 (3)
C8−0.0316 (4)0.37627 (7)0.60703 (9)0.0175 (3)
C90.0658 (4)0.30972 (7)0.65509 (8)0.0158 (3)
C10−0.0406 (4)0.23670 (7)0.61661 (9)0.0184 (3)
H2A0.619 (4)0.3267 (9)0.8975 (11)0.020 (4)*
H3A0.805 (5)0.4406 (9)0.9717 (12)0.023 (4)*
H4A0.649 (5)0.5595 (10)0.8975 (11)0.028 (4)*
H5A0.304 (5)0.5598 (9)0.7531 (11)0.024 (4)*
H7A0.002 (4)0.4918 (9)0.6174 (11)0.020 (4)*
H8A−0.166 (5)0.3735 (10)0.5461 (13)0.030 (4)*
U11U22U33U12U13U23
O10.0486 (7)0.0188 (5)0.0295 (6)0.0018 (5)0.0167 (5)−0.0018 (4)
O20.0375 (6)0.0142 (5)0.0234 (5)−0.0007 (4)−0.0040 (4)0.0047 (4)
O30.0438 (7)0.0173 (5)0.0170 (5)0.0075 (4)0.0072 (4)0.0026 (4)
N10.0169 (6)0.0120 (5)0.0142 (5)0.0006 (4)0.0010 (4)0.0000 (4)
N20.0331 (7)0.0217 (6)0.0237 (6)−0.0029 (5)−0.0020 (5)−0.0014 (5)
N30.0255 (6)0.0153 (5)0.0172 (5)−0.0027 (4)−0.0015 (4)−0.0003 (4)
C10.0146 (6)0.0126 (6)0.0159 (6)0.0002 (4)0.0035 (5)−0.0005 (4)
C20.0180 (6)0.0145 (6)0.0156 (6)0.0004 (5)0.0013 (5)0.0005 (4)
C30.0164 (6)0.0187 (6)0.0177 (6)−0.0017 (5)0.0020 (5)−0.0024 (5)
C40.0180 (7)0.0151 (6)0.0216 (6)−0.0035 (5)0.0044 (5)−0.0037 (5)
C50.0200 (7)0.0128 (6)0.0204 (6)0.0002 (5)0.0053 (5)0.0002 (5)
C60.0146 (6)0.0140 (6)0.0160 (6)0.0009 (4)0.0027 (5)0.0008 (4)
C70.0185 (7)0.0166 (6)0.0177 (6)0.0030 (5)0.0023 (5)0.0023 (5)
C80.0179 (6)0.0192 (6)0.0153 (6)0.0016 (5)0.0008 (5)0.0009 (5)
C90.0157 (6)0.0159 (6)0.0158 (6)−0.0003 (5)0.0017 (5)−0.0016 (4)
C100.0190 (7)0.0192 (6)0.0166 (6)0.0004 (5)0.0003 (5)0.0005 (5)
O1—N31.2301 (15)C3—H3A0.998 (17)
O2—N31.2347 (14)C4—C51.3646 (19)
O3—N31.3015 (14)C4—H4A0.993 (18)
N1—C91.3370 (16)C5—C61.4203 (17)
N1—C11.3642 (15)C5—H5A0.943 (17)
N1—H1N10.9481C6—C71.4104 (18)
N2—C101.1466 (18)C7—C81.3784 (18)
C1—C21.4152 (17)C7—H7A0.976 (17)
C1—C61.4243 (16)C8—C91.3998 (18)
C2—C31.3686 (18)C8—H8A0.977 (18)
C2—H2A0.959 (16)C9—C101.4480 (18)
C3—C41.4188 (18)
C9—N1—C1120.45 (10)C3—C4—H4A119.9 (10)
C9—N1—H1N1120.2C4—C5—C6120.01 (12)
C1—N1—H1N1119.3C4—C5—H5A122.1 (10)
O1—N3—O2123.76 (12)C6—C5—H5A117.9 (10)
O1—N3—O3118.74 (11)C7—C6—C5122.77 (11)
O2—N3—O3117.50 (11)C7—C6—C1118.63 (11)
N1—C1—C2119.72 (11)C5—C6—C1118.60 (12)
N1—C1—C6119.68 (11)C8—C7—C6120.25 (12)
C2—C1—C6120.60 (11)C8—C7—H7A120.5 (10)
C3—C2—C1118.87 (12)C6—C7—H7A119.2 (10)
C3—C2—H2A121.7 (10)C7—C8—C9118.10 (12)
C1—C2—H2A119.4 (10)C7—C8—H8A122.1 (10)
C2—C3—C4121.13 (12)C9—C8—H8A119.8 (10)
C2—C3—H3A119.1 (9)N1—C9—C8122.87 (11)
C4—C3—H3A119.8 (9)N1—C9—C10116.40 (11)
C5—C4—C3120.79 (12)C8—C9—C10120.72 (12)
C5—C4—H4A119.3 (10)N2—C10—C9178.33 (15)
C9—N1—C1—C2−179.23 (11)C2—C1—C6—C7179.11 (11)
C9—N1—C1—C61.04 (18)N1—C1—C6—C5179.37 (11)
N1—C1—C2—C3−179.94 (12)C2—C1—C6—C5−0.36 (18)
C6—C1—C2—C3−0.21 (19)C5—C6—C7—C8179.86 (12)
C1—C2—C3—C40.39 (19)C1—C6—C7—C80.40 (19)
C2—C3—C4—C50.0 (2)C6—C7—C8—C90.44 (19)
C3—C4—C5—C6−0.6 (2)C1—N1—C9—C8−0.16 (19)
C4—C5—C6—C7−178.69 (12)C1—N1—C9—C10−178.81 (11)
C4—C5—C6—C10.76 (19)C7—C8—C9—N1−0.6 (2)
N1—C1—C6—C7−1.15 (18)C7—C8—C9—C10177.99 (12)
D—H···AD—HH···AD···AD—H···A
N1—H1N1···O10.952.563.2376 (15)128
N1—H1N1···O30.951.602.5432 (14)172
C5—H5A···O3i0.943 (16)2.497 (16)3.2835 (16)141.0 (15)
C7—H7A···O2ii0.976 (16)2.473 (16)3.3641 (16)151.8 (12)
C8—H8A···O2iii0.977 (18)2.391 (19)3.3355 (17)162.4 (15)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N1⋯O10.952.563.2376 (15)128
N1—H1N1⋯O30.951.602.5432 (14)172
C5—H5A⋯O3i0.943 (16)2.497 (16)3.2835 (16)141.0 (15)
C7—H7A⋯O2ii0.976 (16)2.473 (16)3.3641 (16)151.8 (12)
C8—H8A⋯O2iii0.977 (18)2.391 (19)3.3355 (17)162.4 (15)

Symmetry codes: (i) ; (ii) ; (iii) .

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