Literature DB >> 21582866

(E)-1-(4-Bromo-phen-yl)ethan-1-one semicarbazone.

Hoong-Kun Fun, Jia Hao Goh, Mahesh Padaki, Shridhar Malladi, Arun M Isloor.   

Abstract

In the title compound, C(9)H(10)BrN(3)O, the hydrazone portion and aliphatic chain are essentially coplanar [maximum deviation 0.057 (15) Å] and the mean plane makes a dihedral angle of 70.9 (6)° with the benzene ring. The main feature of the crystal structure is the inter-molecular N-H⋯O hydrogen bond, which links mol-ecules into zigzag chains along the a axis. These chains are further stacked along the b axis. The crystal structure features non-classical inter-molecular C-H⋯O inter-actions. The crystal studied was a nonmerohedral twin, with a twin ratio of 0.505 (1):0.495 (1).

Entities:  

Year:  2009        PMID: 21582866      PMCID: PMC2969411          DOI: 10.1107/S1600536809022284

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background and applications of semicarbazone derivatives, see: Chandra & Gupta (2005 ▶); Jain et al. (2002 ▶); Pilgram (1978 ▶); Warren et al. (1977 ▶); Yogeeswari et al. (2004 ▶). For the preparation, see: Furniss et al. (1978 ▶). For bond-length data, see: Allen et al. (1987 ▶). For a related structure, see: Fun et al. (2009 ▶). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C9H10BrN3O M = 256.11 Monoclinic, a = 17.6700 (8) Å b = 7.3426 (4) Å c = 7.9082 (4) Å β = 102.953 (3)° V = 999.93 (9) Å3 Z = 4 Mo Kα radiation μ = 4.08 mm−1 T = 100 K 0.22 × 0.12 × 0.08 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (; Bruker, 2005 ▶) T min = 0.466, T max = 0.733 12017 measured reflections 2945 independent reflections 2105 reflections with I > 2σ(I) R int = 0.053

Refinement

R[F 2 > 2σ(F 2)] = 0.080 wR(F 2) = 0.249 S = 1.16 2945 reflections 129 parameters 1 restraint H-atom parameters constrained Δρmax = 3.03 e Å−3 Δρmin = −1.11 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809022284/ng2596sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809022284/ng2596Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H10BrN3OF(000) = 512
Mr = 256.11Dx = 1.701 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3514 reflections
a = 17.6700 (8) Åθ = 3.0–28.2°
b = 7.3426 (4) ŵ = 4.08 mm1
c = 7.9082 (4) ÅT = 100 K
β = 102.953 (3)°Block, colourless
V = 999.93 (9) Å30.22 × 0.12 × 0.08 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer2945 independent reflections
Radiation source: fine-focus sealed tube2105 reflections with I > 2σ(I)
graphiteRint = 0.053
φ and ω scansθmax = 30.2°, θmin = 1.2°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −24→24
Tmin = 0.466, Tmax = 0.733k = −10→10
12017 measured reflectionsl = −11→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.080Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.249H-atom parameters constrained
S = 1.16w = 1/[σ2(Fo2) + (0.1217P)2 + 9.4338P] where P = (Fo2 + 2Fc2)/3
2945 reflections(Δ/σ)max < 0.000
129 parametersΔρmax = 3.03 e Å3
1 restraintΔρmin = −1.11 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1)K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.03467 (5)0.43707 (10)0.2675 (2)0.0212 (2)
N30.4198 (6)0.1238 (13)0.8352 (16)0.034 (2)
H3A0.44300.02370.82140.041*
H3B0.37720.12140.87040.041*
N10.3450 (5)0.4205 (11)0.899 (2)0.039 (3)
N20.4105 (5)0.4401 (11)0.8290 (14)0.027 (2)
H2B0.42570.54590.80380.032*
O10.5113 (4)0.2902 (11)0.7512 (13)0.032 (2)
C10.1856 (7)0.6630 (14)0.6881 (14)0.026 (2)
H1A0.18940.77290.74790.032*
C20.1231 (6)0.6387 (14)0.5429 (16)0.027 (2)
H2A0.08760.73170.50500.032*
C30.1165 (6)0.4722 (15)0.4594 (13)0.023 (2)
C40.1698 (7)0.3367 (14)0.5184 (14)0.025 (2)
H4A0.16380.22360.46420.030*
C50.2310 (7)0.3651 (14)0.6544 (16)0.028 (2)
H5A0.26710.27250.68850.033*
C60.2409 (6)0.5321 (14)0.7448 (17)0.027 (2)
C70.3094 (5)0.5625 (12)0.911 (3)0.0244 (19)
C80.4503 (7)0.2840 (13)0.8017 (14)0.025 (2)
C90.3368 (5)0.7556 (12)0.914 (3)0.030 (2)
H9A0.39110.76100.96820.045*
H9B0.30810.82920.97790.045*
H9C0.32880.80040.79710.045*
U11U22U33U12U13U23
Br10.0269 (4)0.0173 (4)0.0201 (8)−0.0037 (3)0.0067 (17)−0.0023 (5)
N30.039 (5)0.013 (4)0.057 (7)0.000 (4)0.026 (5)−0.004 (5)
N10.019 (3)0.015 (4)0.083 (11)0.001 (3)0.011 (6)−0.004 (6)
N20.033 (5)0.009 (4)0.043 (6)0.001 (3)0.018 (4)−0.004 (4)
O10.029 (3)0.037 (5)0.038 (4)−0.003 (3)0.021 (4)−0.001 (5)
C10.043 (6)0.013 (4)0.023 (5)−0.003 (4)0.008 (5)−0.004 (4)
C20.023 (5)0.019 (4)0.039 (6)−0.005 (4)0.008 (5)−0.003 (5)
C30.020 (4)0.034 (6)0.016 (4)−0.001 (4)0.008 (4)0.005 (4)
C40.035 (5)0.019 (5)0.019 (5)−0.008 (4)0.002 (4)0.004 (4)
C50.033 (5)0.013 (4)0.034 (6)0.000 (4)0.004 (5)−0.005 (4)
C60.024 (5)0.020 (5)0.040 (6)0.000 (4)0.014 (5)0.004 (4)
C70.021 (3)0.016 (3)0.036 (6)0.003 (3)0.005 (8)−0.016 (6)
C80.046 (6)0.007 (4)0.024 (5)0.007 (4)0.009 (5)−0.002 (4)
C90.022 (4)0.011 (3)0.060 (8)−0.003 (3)0.018 (8)0.009 (8)
Br1—C31.865 (10)C2—C31.382 (16)
N3—C81.344 (14)C2—H2A0.9300
N3—H3A0.8600C3—C41.378 (15)
N3—H3B0.8600C4—C51.359 (15)
N1—C71.233 (11)C4—H4A0.9300
N1—N21.397 (9)C5—C61.410 (15)
N2—C81.387 (12)C5—H5A0.9300
N2—H2B0.8600C6—C71.59 (2)
O1—C81.232 (13)C7—C91.496 (12)
C1—C61.373 (15)C9—H9A0.9600
C1—C21.415 (16)C9—H9B0.9600
C1—H1A0.9300C9—H9C0.9600
C8—N3—H3A120.0C4—C5—C6121.4 (11)
C8—N3—H3B120.0C4—C5—H5A119.3
H3A—N3—H3B120.0C6—C5—H5A119.3
C7—N1—N2115.2 (10)C1—C6—C5116.4 (11)
C8—N2—N1118.1 (8)C1—C6—C7121.7 (9)
C8—N2—H2B121.0C5—C6—C7121.8 (9)
N1—N2—H2B121.0N1—C7—C9129.3 (10)
C6—C1—C2123.1 (10)N1—C7—C697.0 (12)
C6—C1—H1A118.5C9—C7—C6109.2 (13)
C2—C1—H1A118.5O1—C8—N3121.0 (9)
C3—C2—C1117.8 (10)O1—C8—N2122.1 (9)
C3—C2—H2A121.1N3—C8—N2116.9 (10)
C1—C2—H2A121.1C7—C9—H9A109.5
C4—C3—C2119.9 (10)C7—C9—H9B109.5
C4—C3—Br1121.5 (8)H9A—C9—H9B109.5
C2—C3—Br1118.6 (8)C7—C9—H9C109.5
C5—C4—C3121.3 (10)H9A—C9—H9C109.5
C5—C4—H4A119.4H9B—C9—H9C109.5
C3—C4—H4A119.4
C7—N1—N2—C8−176.1 (14)C4—C5—C6—C7176.3 (13)
C6—C1—C2—C32.4 (17)N2—N1—C7—C9−20 (3)
C1—C2—C3—C40.1 (15)N2—N1—C7—C6101.6 (13)
C1—C2—C3—Br1−179.9 (8)C1—C6—C7—N1−174.6 (12)
C2—C3—C4—C5−2.4 (16)C5—C6—C7—N19.4 (17)
Br1—C3—C4—C5177.5 (9)C1—C6—C7—C9−38.6 (17)
C3—C4—C5—C62.4 (18)C5—C6—C7—C9145.3 (12)
C2—C1—C6—C5−2.4 (17)N1—N2—C8—O1−175.3 (12)
C2—C1—C6—C7−178.7 (12)N1—N2—C8—N33.9 (16)
C4—C5—C6—C10.0 (17)
D—H···AD—HH···AD···AD—H···A
N2—H2B···O1i0.862.213.052 (12)168
N3—H3A···O1ii0.862.032.885 (13)171
C9—H9A···O1iii0.962.513.34 (2)144
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2B⋯O1i0.862.213.052 (12)168
N3—H3A⋯O1ii0.862.032.885 (13)171
C9—H9A⋯O1iii0.962.513.34 (2)144

Symmetry codes: (i) ; (ii) ; (iii) .

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