Literature DB >> 21580121

(E)-N'-(2-Hydroxy-benzyl-idene)-2-(4-isobutyl-phen-yl)propanohydrazide.

Jia Hao Goh, Hoong-Kun Fun, A C Vinayaka, B Kalluraya.   

Abstract

The title hydrazide compound, C(20)H(24)N(2)O(2), exists in a trans configuration with respect to the acyclic C=N bond and an intra-molecular O-H⋯N hydrogen bond generates an S(6) ring motif. The mean plane through the formohydrazide unit is essentially planar [maximum deviation = 0.025 (2) Å], and forms dihedral angles of 24.45 (16) and 87.14 (16)° with the two benzene rings. In the crystal structure, inter-molecular N-H⋯O and C-H⋯O hydrogen bonds link neighbouring mol-ecules into extended chains along the c axis, which incorporate R(2) (2)(16) ring motifs. An inter-molecular C-H⋯π inter-action is also observed.

Entities:  

Year:  2009        PMID: 21580121      PMCID: PMC2980184          DOI: 10.1107/S1600536809050971

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the metal coordination and pharmacological activity of the title compound, see: Bedia et al. (2006 ▶); Rodrìguez-Argüelles et al. (2004 ▶); Rollas et al. (2002 ▶); Terzioglu & Gürsoy (2003 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For related structures, see: Fun et al. (2009 ▶). For bond-length data, see: Allen et al. (1987 ▶). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C20H24N2O2 M = 324.41 Monoclinic, a = 5.5017 (2) Å b = 33.0204 (14) Å c = 9.7279 (4) Å β = 91.731 (3)° V = 1766.45 (12) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 100 K 0.39 × 0.24 × 0.19 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.970, T max = 0.985 18817 measured reflections 4059 independent reflections 3190 reflections with I > 2σ(I) R int = 0.042

Refinement

R[F 2 > 2σ(F 2)] = 0.076 wR(F 2) = 0.181 S = 1.18 4059 reflections 228 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.26 e Å−3 Δρmin = −0.28 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809050971/hb5254sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809050971/hb5254Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H24N2O2F(000) = 696
Mr = 324.41Dx = 1.220 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 7778 reflections
a = 5.5017 (2) Åθ = 2.4–30.0°
b = 33.0204 (14) ŵ = 0.08 mm1
c = 9.7279 (4) ÅT = 100 K
β = 91.731 (3)°Block, colourless
V = 1766.45 (12) Å30.39 × 0.24 × 0.19 mm
Z = 4
Bruker SMART APEXII CCD diffractometer4059 independent reflections
Radiation source: fine-focus sealed tube3190 reflections with I > 2σ(I)
graphiteRint = 0.042
φ and ω scansθmax = 27.5°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −7→7
Tmin = 0.970, Tmax = 0.985k = −38→42
18817 measured reflectionsl = −12→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.076Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.181H atoms treated by a mixture of independent and constrained refinement
S = 1.18w = 1/[σ2(Fo2) + (0.0443P)2 + 2.5698P] where P = (Fo2 + 2Fc2)/3
4059 reflections(Δ/σ)max < 0.001
228 parametersΔρmax = 0.26 e Å3
0 restraintsΔρmin = −0.28 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1)K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O1−0.2604 (4)0.18426 (6)0.5584 (2)0.0358 (5)
O20.3223 (3)0.25847 (5)0.60286 (15)0.0209 (4)
N10.1237 (4)0.20555 (6)0.4218 (2)0.0199 (5)
N20.3012 (4)0.23282 (6)0.3875 (2)0.0210 (5)
C1−0.1353 (6)0.11240 (9)0.2812 (3)0.0364 (7)
H1A−0.02860.10870.20990.044*
C2−0.3138 (6)0.08401 (9)0.3013 (3)0.0367 (8)
H2A−0.32680.06140.24480.044*
C3−0.4735 (6)0.08962 (9)0.4065 (4)0.0385 (8)
H3A−0.59520.07060.42050.046*
C4−0.4540 (5)0.12339 (9)0.4918 (4)0.0382 (7)
H4A−0.56250.12680.56240.046*
C5−0.2736 (5)0.15194 (8)0.4721 (3)0.0285 (6)
C6−0.1095 (5)0.14680 (8)0.3650 (3)0.0269 (6)
C70.0819 (5)0.17603 (8)0.3390 (3)0.0276 (6)
H7A0.17480.17320.26130.033*
C80.3850 (4)0.25968 (7)0.4827 (2)0.0156 (5)
C90.5550 (5)0.29208 (8)0.4303 (3)0.0235 (5)
H9A0.61700.28340.34170.028*
C100.4016 (5)0.33029 (8)0.4081 (3)0.0235 (5)
C110.4132 (5)0.36299 (8)0.4983 (3)0.0310 (6)
H11A0.52600.36280.57150.037*
C120.2587 (5)0.39598 (8)0.4807 (3)0.0277 (6)
H12A0.27350.41770.54110.033*
C130.0842 (6)0.39741 (8)0.3763 (3)0.0277 (6)
C140.0756 (8)0.36506 (9)0.2855 (3)0.0518 (11)
H14A−0.03890.36520.21310.062*
C150.2335 (7)0.33241 (9)0.2998 (3)0.0438 (9)
H15A0.22590.31160.23540.053*
C16−0.0929 (6)0.43214 (8)0.3616 (3)0.0319 (7)
H16A−0.14840.43920.45220.038*
H16B−0.23340.42300.30750.038*
C170.0063 (6)0.47049 (8)0.2944 (3)0.0331 (7)
H17A0.13930.48090.35370.040*
C18−0.1918 (7)0.50278 (9)0.2851 (3)0.0435 (8)
H18A−0.12640.52720.24720.065*
H18B−0.24990.50820.37540.065*
H18C−0.32390.49330.22700.065*
C190.1076 (7)0.46188 (9)0.1530 (3)0.0402 (8)
H19A0.15580.48690.11140.060*
H19B−0.01520.44910.09600.060*
H19C0.24600.44430.16280.060*
C200.7674 (5)0.29712 (9)0.5318 (4)0.0423 (8)
H20A0.86360.27290.53350.063*
H20B0.70740.30220.62180.063*
H20C0.86580.31950.50430.063*
H1N20.346 (6)0.2342 (9)0.303 (3)0.034 (9)*
H1O1−0.127 (8)0.1984 (12)0.539 (4)0.064 (13)*
U11U22U33U12U13U23
O10.0260 (11)0.0248 (10)0.0569 (14)−0.0014 (8)0.0068 (10)−0.0075 (9)
O20.0300 (10)0.0253 (9)0.0074 (7)0.0012 (7)0.0012 (7)−0.0001 (7)
N10.0248 (11)0.0194 (10)0.0150 (9)−0.0027 (8)−0.0055 (8)0.0027 (8)
N20.0329 (12)0.0221 (11)0.0083 (9)−0.0060 (9)0.0021 (8)0.0006 (8)
C10.060 (2)0.0304 (15)0.0184 (13)−0.0137 (14)−0.0084 (13)0.0022 (11)
C20.057 (2)0.0258 (15)0.0268 (14)−0.0115 (13)−0.0136 (14)0.0030 (12)
C30.0319 (16)0.0256 (15)0.057 (2)−0.0059 (12)−0.0153 (15)0.0061 (14)
C40.0206 (14)0.0292 (15)0.065 (2)0.0004 (11)−0.0005 (14)−0.0014 (14)
C50.0243 (13)0.0198 (13)0.0409 (16)0.0032 (10)−0.0087 (12)0.0015 (11)
C60.0379 (15)0.0226 (13)0.0192 (12)−0.0055 (11)−0.0128 (11)0.0059 (10)
C70.0434 (16)0.0256 (14)0.0134 (11)−0.0049 (12)−0.0048 (11)0.0025 (10)
C80.0146 (11)0.0190 (11)0.0132 (10)0.0031 (9)−0.0001 (8)0.0004 (9)
C90.0239 (13)0.0202 (12)0.0272 (13)−0.0009 (10)0.0118 (10)−0.0033 (10)
C100.0311 (14)0.0191 (12)0.0212 (12)−0.0024 (10)0.0130 (10)0.0016 (10)
C110.0232 (14)0.0261 (14)0.0435 (16)−0.0025 (11)−0.0013 (12)−0.0117 (12)
C120.0255 (14)0.0239 (13)0.0339 (15)−0.0010 (11)0.0057 (11)−0.0101 (11)
C130.0454 (17)0.0201 (13)0.0181 (12)0.0021 (11)0.0076 (11)0.0042 (10)
C140.105 (3)0.0295 (16)0.0196 (14)0.0204 (18)−0.0219 (17)−0.0017 (12)
C150.095 (3)0.0228 (14)0.0131 (12)0.0159 (16)−0.0038 (15)−0.0027 (11)
C160.0447 (18)0.0244 (14)0.0265 (14)0.0061 (12)0.0002 (12)0.0016 (11)
C170.0498 (19)0.0229 (14)0.0262 (14)0.0030 (12)−0.0069 (13)0.0019 (11)
C180.062 (2)0.0271 (15)0.0413 (18)0.0081 (15)−0.0068 (16)0.0036 (13)
C190.057 (2)0.0328 (16)0.0305 (16)0.0008 (14)−0.0011 (14)0.0074 (13)
C200.0220 (14)0.0266 (15)0.078 (2)−0.0012 (11)−0.0006 (15)−0.0134 (15)
O1—C51.359 (3)C11—C121.389 (4)
O1—H1O10.89 (4)C11—H11A0.9300
O2—C81.229 (3)C12—C131.377 (4)
N1—C71.281 (3)C12—H12A0.9300
N1—N21.377 (3)C13—C141.386 (4)
N2—C81.354 (3)C13—C161.509 (4)
N2—H1N20.86 (3)C14—C151.389 (4)
C1—C21.376 (4)C14—H14A0.9300
C1—C61.403 (4)C15—H15A0.9300
C1—H1A0.9300C16—C171.533 (4)
C2—C31.382 (5)C16—H16A0.9700
C2—H2A0.9300C16—H16B0.9700
C3—C41.392 (4)C17—C181.526 (4)
C3—H3A0.9300C17—C191.526 (4)
C4—C51.387 (4)C17—H17A0.9800
C4—H4A0.9300C18—H18A0.9600
C5—C61.409 (4)C18—H18B0.9600
C6—C71.456 (4)C18—H18C0.9600
C7—H7A0.9300C19—H19A0.9600
C8—C91.519 (3)C19—H19B0.9600
C9—C201.516 (4)C19—H19C0.9600
C9—C101.530 (4)C20—H20A0.9600
C9—H9A0.9800C20—H20B0.9600
C10—C151.382 (4)C20—H20C0.9600
C10—C111.392 (4)
C5—O1—H1O1108 (3)C13—C12—H12A119.1
C7—N1—N2117.4 (2)C11—C12—H12A119.1
C8—N2—N1119.4 (2)C12—C13—C14117.0 (3)
C8—N2—H1N2121 (2)C12—C13—C16122.0 (2)
N1—N2—H1N2119 (2)C14—C13—C16121.0 (3)
C2—C1—C6122.0 (3)C13—C14—C15121.6 (3)
C2—C1—H1A119.0C13—C14—H14A119.2
C6—C1—H1A119.0C15—C14—H14A119.2
C1—C2—C3119.1 (3)C10—C15—C14121.2 (3)
C1—C2—H2A120.4C10—C15—H15A119.4
C3—C2—H2A120.4C14—C15—H15A119.4
C2—C3—C4120.6 (3)C13—C16—C17115.5 (3)
C2—C3—H3A119.7C13—C16—H16A108.4
C4—C3—H3A119.7C17—C16—H16A108.4
C5—C4—C3120.3 (3)C13—C16—H16B108.4
C5—C4—H4A119.8C17—C16—H16B108.4
C3—C4—H4A119.8H16A—C16—H16B107.5
O1—C5—C4118.3 (3)C18—C17—C19110.9 (2)
O1—C5—C6121.9 (2)C18—C17—C16109.8 (3)
C4—C5—C6119.8 (3)C19—C17—C16112.0 (2)
C1—C6—C5118.1 (3)C18—C17—H17A108.0
C1—C6—C7119.8 (3)C19—C17—H17A108.0
C5—C6—C7122.1 (2)C16—C17—H17A108.0
N1—C7—C6120.8 (3)C17—C18—H18A109.5
N1—C7—H7A119.6C17—C18—H18B109.5
C6—C7—H7A119.6H18A—C18—H18B109.5
O2—C8—N2122.0 (2)C17—C18—H18C109.5
O2—C8—C9122.4 (2)H18A—C18—H18C109.5
N2—C8—C9115.6 (2)H18B—C18—H18C109.5
C20—C9—C8109.2 (2)C17—C19—H19A109.5
C20—C9—C10114.4 (2)C17—C19—H19B109.5
C8—C9—C10106.6 (2)H19A—C19—H19B109.5
C20—C9—H9A108.8C17—C19—H19C109.5
C8—C9—H9A108.8H19A—C19—H19C109.5
C10—C9—H9A108.8H19B—C19—H19C109.5
C15—C10—C11117.3 (3)C9—C20—H20A109.5
C15—C10—C9120.2 (2)C9—C20—H20B109.5
C11—C10—C9122.4 (2)H20A—C20—H20B109.5
C12—C11—C10120.9 (3)C9—C20—H20C109.5
C12—C11—H11A119.5H20A—C20—H20C109.5
C10—C11—H11A119.5H20B—C20—H20C109.5
C13—C12—C11121.9 (3)
C7—N1—N2—C8−167.2 (2)N2—C8—C9—C1099.7 (2)
C6—C1—C2—C30.4 (4)C20—C9—C10—C15167.3 (3)
C1—C2—C3—C4−0.3 (4)C8—C9—C10—C15−71.9 (3)
C2—C3—C4—C50.0 (4)C20—C9—C10—C11−16.6 (4)
C3—C4—C5—O1−179.5 (3)C8—C9—C10—C11104.2 (3)
C3—C4—C5—C60.1 (4)C15—C10—C11—C121.0 (4)
C2—C1—C6—C5−0.2 (4)C9—C10—C11—C12−175.2 (3)
C2—C1—C6—C7−179.7 (3)C10—C11—C12—C131.7 (4)
O1—C5—C6—C1179.6 (2)C11—C12—C13—C14−2.5 (5)
C4—C5—C6—C10.0 (4)C11—C12—C13—C16176.6 (3)
O1—C5—C6—C7−0.9 (4)C12—C13—C14—C150.7 (5)
C4—C5—C6—C7179.4 (3)C16—C13—C14—C15−178.4 (3)
N2—N1—C7—C6−177.5 (2)C11—C10—C15—C14−2.8 (5)
C1—C6—C7—N1−173.3 (2)C9—C10—C15—C14173.5 (3)
C5—C6—C7—N17.3 (4)C13—C14—C15—C102.0 (6)
N1—N2—C8—O26.1 (3)C12—C13—C16—C1779.8 (3)
N1—N2—C8—C9−172.1 (2)C14—C13—C16—C17−101.1 (3)
O2—C8—C9—C2045.5 (3)C13—C16—C17—C18179.5 (2)
N2—C8—C9—C20−136.3 (2)C13—C16—C17—C1955.8 (3)
O2—C8—C9—C10−78.5 (3)
D—H···AD—HH···AD···AD—H···A
N2—H1N2···O2i0.87 (3)1.96 (3)2.790 (2)159 (3)
O1—H1O1···N10.90 (4)1.83 (4)2.626 (3)147 (4)
C14—H14A···O1i0.932.513.272 (4)139
C20—H20C···Cg1ii0.962.803.722 (3)161
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H1N2⋯O2i0.87 (3)1.96 (3)2.790 (2)159 (3)
O1—H1O1⋯N10.90 (4)1.83 (4)2.626 (3)147 (4)
C14—H14A⋯O1i0.932.513.272 (4)139
C20—H20CCg1ii0.962.803.722 (3)161

Symmetry codes: (i) ; (ii) . Cg1 is the centroid of the C10–C15 benzene ring.

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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3.  Synthesis and characterization of novel hydrazide-hydrazones and the study of their structure-antituberculosis activity.

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4.  N-(2,4-Dioxo-1,3-thia-zolidin-3-yl)-2-(4-isobutyl-phen-yl)propanamide.

Authors:  Hoong-Kun Fun; Jia Hao Goh; A C Vinayaka; B Kalluraya
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-08

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Authors:  Maria C Rodríuez-Argüelles; Marisa Belicchi errari; Franco Bisceglie; Corrado Pelizzi; Giorgio Pelosi; Silvana Pinelli; Monica Sassi
Journal:  J Inorg Biochem       Date:  2004-02       Impact factor: 4.155

6.  Synthesis and anticancer evaluation of some new hydrazone derivatives of 2,6-dimethylimidazo[2,1-b][1,3,4]thiadiazole-5-carbohydrazide.

Authors:  Nalan Terzioglu; Aysel Gürsoy
Journal:  Eur J Med Chem       Date:  2003 Jul-Aug       Impact factor: 6.514

7.  (E)-1-(4-Bromo-phen-yl)ethan-1-one semicarbazone.

Authors:  Hoong-Kun Fun; Jia Hao Goh; Mahesh Padaki; Shridhar Malladi; Arun M Isloor
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-17

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Authors:  Anthony L Spek
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  4 in total

1.  2-Chloro-N'-(4-nitro-benzyl-idene)benzo-hydrazide.

Authors:  Cong-Shan Zhou; Tao Yang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-01-09

2.  N'-(5-Bromo-2-hydroxy-benzyl-idene)-4-chloro-benzohydrazide.

Authors:  Cong-Shan Zhou; Tao Yang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-06

3.  2-Chloro-N'-(5-hydr-oxy-2-nitro-benzyl-idene)benzohydrazide.

Authors:  Cong-Shan Zhou; Tao Yang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-01-16

4.  (E)-N'-(5-Bromo-2-hy-droxy-benzyl-idene)-2-(4-isobutyl-phen-yl)propano-hydrazide.

Authors:  Shaaban K Mohamed; Peter N Horton; Mehmet Akkurt; Mustafa R Albayati; Antar A Abdelhamid
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