Literature DB >> 22219921

(2E)-2-(4-Fluoro-benzyl-idene)hydrazinecarboxamide.

Hoong-Kun Fun, Tze Shyang Chia, Shridhar Malladi, Arun M Isloor, Kammasandra N Shivananda.   

Abstract

In the title compound, C(8)H(8)FN(3)O, the semicarbazide group is close to being planar, with a maximum deviation of 0.020 (1) Å, and subtends a dihedral angle of 16.63 (9)° with its attached fluoro-benzene ring. In the crystal, mol-ecules are linked by N-H⋯O hydrogen bonds, forming layers lying parallel to the bc plane.

Entities:  

Year:  2011        PMID: 22219921      PMCID: PMC3247616          DOI: 10.1107/S1600536811040797

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to semicarbazides and semicarbazones, see: Dogan et al. (1999 ▶); Pandeya & Dimmock (1993 ▶); Pandeya et al. (1998 ▶); Sriram et al. (2004 ▶); Yogeeswari et al. (2004 ▶); For further synthetic details, see: Furniss et al. (1978 ▶). For related structures, see: Fun et al. (2009a ▶,b ▶). For reference bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C8H8FN3O M = 181.17 Monoclinic, a = 16.522 (2) Å b = 4.4381 (6) Å c = 11.9457 (15) Å β = 103.478 (3)° V = 851.80 (19) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 296 K 0.72 × 0.18 × 0.12 mm

Data collection

Bruker APEX DUO CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.923, T max = 0.987 8746 measured reflections 2418 independent reflections 1657 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.209 S = 1.00 2418 reflections 130 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.31 e Å−3 Δρmin = −0.21 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811040797/hb6436sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811040797/hb6436Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811040797/hb6436Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H8FN3OF(000) = 376
Mr = 181.17Dx = 1.413 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2666 reflections
a = 16.522 (2) Åθ = 2.5–29.4°
b = 4.4381 (6) ŵ = 0.11 mm1
c = 11.9457 (15) ÅT = 296 K
β = 103.478 (3)°Needle, colourless
V = 851.80 (19) Å30.72 × 0.18 × 0.12 mm
Z = 4
Bruker APEX DUO CCD diffractometer2418 independent reflections
Radiation source: fine-focus sealed tube1657 reflections with I > 2σ(I)
graphiteRint = 0.024
φ and ω scansθmax = 29.9°, θmin = 1.3°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −23→23
Tmin = 0.923, Tmax = 0.987k = −6→6
8746 measured reflectionsl = −16→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.209H atoms treated by a mixture of independent and constrained refinement
S = 1.00w = 1/[σ2(Fo2) + (0.1446P)2 + 0.0418P] where P = (Fo2 + 2Fc2)/3
2418 reflections(Δ/σ)max < 0.001
130 parametersΔρmax = 0.31 e Å3
0 restraintsΔρmin = −0.21 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
F10.51936 (9)1.2636 (4)1.15848 (18)0.1170 (6)
O11.01013 (7)0.7059 (3)0.87156 (9)0.0508 (3)
N10.83497 (7)0.8821 (3)0.97516 (10)0.0448 (3)
N20.90494 (8)0.7354 (3)0.96093 (11)0.0470 (3)
N30.91237 (8)1.0690 (3)0.81619 (11)0.0493 (4)
C10.71134 (11)0.8578 (5)1.18840 (15)0.0637 (5)
H1A0.74610.73331.24130.076*
C20.63885 (11)0.9701 (6)1.21288 (16)0.0705 (5)
H2A0.62440.92171.28140.085*
C30.58977 (12)1.1518 (5)1.1342 (2)0.0740 (6)
C40.60851 (13)1.2285 (6)1.0325 (2)0.0855 (7)
H4A0.57351.35430.98050.103*
C50.68021 (11)1.1161 (5)1.00849 (17)0.0669 (5)
H5A0.69371.16620.93940.080*
C60.73235 (9)0.9300 (4)1.08559 (13)0.0493 (4)
C70.80796 (9)0.8014 (4)1.06141 (13)0.0504 (4)
H7A0.83710.65601.11090.060*
C80.94581 (8)0.8362 (3)0.88136 (11)0.0405 (3)
H1N30.9423 (12)1.145 (5)0.7725 (18)0.064 (5)*
H1N20.9306 (12)0.599 (5)1.0133 (16)0.061 (5)*
H2N30.8717 (14)1.181 (5)0.8357 (19)0.074 (6)*
U11U22U33U12U13U23
F10.0854 (10)0.1393 (14)0.1524 (15)0.0374 (9)0.0807 (10)0.0080 (10)
O10.0544 (6)0.0586 (7)0.0499 (6)0.0023 (4)0.0334 (5)−0.0022 (4)
N10.0447 (6)0.0544 (7)0.0417 (6)0.0019 (5)0.0228 (5)−0.0006 (5)
N20.0490 (7)0.0566 (7)0.0446 (7)0.0073 (5)0.0296 (5)0.0048 (5)
N30.0569 (7)0.0541 (7)0.0457 (7)−0.0004 (5)0.0299 (6)0.0032 (5)
C10.0563 (9)0.0936 (13)0.0502 (9)0.0081 (8)0.0304 (7)0.0076 (8)
C20.0662 (10)0.0974 (15)0.0620 (10)−0.0021 (9)0.0438 (9)−0.0068 (10)
C30.0558 (10)0.0863 (14)0.0938 (15)0.0098 (8)0.0457 (10)−0.0057 (11)
C40.0695 (12)0.1019 (16)0.0965 (17)0.0321 (11)0.0423 (12)0.0232 (13)
C50.0631 (10)0.0820 (12)0.0656 (11)0.0196 (8)0.0353 (8)0.0179 (9)
C60.0457 (7)0.0643 (9)0.0448 (7)0.0019 (6)0.0244 (6)−0.0001 (6)
C70.0482 (8)0.0673 (9)0.0425 (8)0.0090 (6)0.0245 (6)0.0085 (6)
C80.0461 (7)0.0452 (7)0.0361 (6)−0.0067 (5)0.0215 (5)−0.0085 (5)
F1—C31.3568 (19)C1—H1A0.9300
O1—C81.2393 (16)C2—C31.355 (3)
N1—C71.2661 (18)C2—H2A0.9300
N1—N21.3714 (16)C3—C41.365 (3)
N2—C81.3634 (17)C4—C51.376 (2)
N2—H1N20.90 (2)C4—H4A0.9300
N3—C81.3333 (18)C5—C61.379 (2)
N3—H1N30.87 (2)C5—H5A0.9300
N3—H2N30.91 (2)C6—C71.4621 (19)
C1—C21.390 (2)C7—H7A0.9300
C1—C61.389 (2)
C7—N1—N2115.71 (12)C3—C4—C5118.7 (2)
C8—N2—N1119.96 (12)C3—C4—H4A120.6
C8—N2—H1N2118.4 (12)C5—C4—H4A120.6
N1—N2—H1N2120.3 (12)C4—C5—C6120.79 (17)
C8—N3—H1N3115.9 (13)C4—C5—H5A119.6
C8—N3—H2N3120.3 (14)C6—C5—H5A119.6
H1N3—N3—H2N3120 (2)C5—C6—C1118.85 (14)
C2—C1—C6120.56 (17)C5—C6—C7122.08 (14)
C2—C1—H1A119.7C1—C6—C7119.06 (15)
C6—C1—H1A119.7N1—C7—C6121.99 (14)
C3—C2—C1118.24 (16)N1—C7—H7A119.0
C3—C2—H2A120.9C6—C7—H7A119.0
C1—C2—H2A120.9O1—C8—N3123.66 (12)
F1—C3—C2118.27 (19)O1—C8—N2119.18 (13)
F1—C3—C4118.9 (2)N3—C8—N2117.15 (12)
C2—C3—C4122.86 (16)
C7—N1—N2—C8−170.19 (13)C4—C5—C6—C7178.57 (19)
C6—C1—C2—C3−0.3 (3)C2—C1—C6—C50.3 (3)
C1—C2—C3—F1−179.4 (2)C2—C1—C6—C7−178.40 (17)
C1—C2—C3—C40.0 (4)N2—N1—C7—C6−177.87 (13)
F1—C3—C4—C5179.6 (2)C5—C6—C7—N18.7 (3)
C2—C3—C4—C50.2 (4)C1—C6—C7—N1−172.65 (16)
C3—C4—C5—C6−0.1 (4)N1—N2—C8—O1178.19 (12)
C4—C5—C6—C1−0.1 (3)N1—N2—C8—N3−3.3 (2)
D—H···AD—HH···AD···AD—H···A
N3—H1N3···O1i0.88 (2)2.07 (2)2.8954 (19)158 (2)
N2—H1N2···O1ii0.92 (2)2.00 (2)2.9155 (19)179 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H1N3⋯O1i0.88 (2)2.07 (2)2.8954 (19)158 (2)
N2—H1N2⋯O1ii0.92 (2)2.00 (2)2.9155 (19)179 (2)

Symmetry codes: (i) ; (ii) .

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