| Literature DB >> 22219921 |
Hoong-Kun Fun, Tze Shyang Chia, Shridhar Malladi, Arun M Isloor, Kammasandra N Shivananda.
Abstract
In the title compound, C(8)H(8)FN(3)O, the semicarbazide group is close to being planar, with a maximum deviation of 0.020 (1) Å, and subtends a dihedral angle of 16.63 (9)° with its attached fluoro-benzene ring. In the crystal, mol-ecules are linked by N-H⋯O hydrogen bonds, forming layers lying parallel to the bc plane.Entities:
Year: 2011 PMID: 22219921 PMCID: PMC3247616 DOI: 10.1107/S1600536811040797
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H8FN3O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2666 reflections |
| θ = 2.5–29.4° | |
| µ = 0.11 mm−1 | |
| β = 103.478 (3)° | Needle, colourless |
| 0.72 × 0.18 × 0.12 mm | |
| Bruker APEX DUO CCD diffractometer | 2418 independent reflections |
| Radiation source: fine-focus sealed tube | 1657 reflections with |
| graphite | |
| φ and ω scans | θmax = 29.9°, θmin = 1.3° |
| Absorption correction: multi-scan ( | |
| 8746 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2418 reflections | (Δ/σ)max < 0.001 |
| 130 parameters | Δρmax = 0.31 e Å−3 |
| 0 restraints | Δρmin = −0.21 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| F1 | 0.51936 (9) | 1.2636 (4) | 1.15848 (18) | 0.1170 (6) | |
| O1 | 1.01013 (7) | 0.7059 (3) | 0.87156 (9) | 0.0508 (3) | |
| N1 | 0.83497 (7) | 0.8821 (3) | 0.97516 (10) | 0.0448 (3) | |
| N2 | 0.90494 (8) | 0.7354 (3) | 0.96093 (11) | 0.0470 (3) | |
| N3 | 0.91237 (8) | 1.0690 (3) | 0.81619 (11) | 0.0493 (4) | |
| C1 | 0.71134 (11) | 0.8578 (5) | 1.18840 (15) | 0.0637 (5) | |
| H1A | 0.7461 | 0.7333 | 1.2413 | 0.076* | |
| C2 | 0.63885 (11) | 0.9701 (6) | 1.21288 (16) | 0.0705 (5) | |
| H2A | 0.6244 | 0.9217 | 1.2814 | 0.085* | |
| C3 | 0.58977 (12) | 1.1518 (5) | 1.1342 (2) | 0.0740 (6) | |
| C4 | 0.60851 (13) | 1.2285 (6) | 1.0325 (2) | 0.0855 (7) | |
| H4A | 0.5735 | 1.3543 | 0.9805 | 0.103* | |
| C5 | 0.68021 (11) | 1.1161 (5) | 1.00849 (17) | 0.0669 (5) | |
| H5A | 0.6937 | 1.1662 | 0.9394 | 0.080* | |
| C6 | 0.73235 (9) | 0.9300 (4) | 1.08559 (13) | 0.0493 (4) | |
| C7 | 0.80796 (9) | 0.8014 (4) | 1.06141 (13) | 0.0504 (4) | |
| H7A | 0.8371 | 0.6560 | 1.1109 | 0.060* | |
| C8 | 0.94581 (8) | 0.8362 (3) | 0.88136 (11) | 0.0405 (3) | |
| H1N3 | 0.9423 (12) | 1.145 (5) | 0.7725 (18) | 0.064 (5)* | |
| H1N2 | 0.9306 (12) | 0.599 (5) | 1.0133 (16) | 0.061 (5)* | |
| H2N3 | 0.8717 (14) | 1.181 (5) | 0.8357 (19) | 0.074 (6)* |
| F1 | 0.0854 (10) | 0.1393 (14) | 0.1524 (15) | 0.0374 (9) | 0.0807 (10) | 0.0080 (10) |
| O1 | 0.0544 (6) | 0.0586 (7) | 0.0499 (6) | 0.0023 (4) | 0.0334 (5) | −0.0022 (4) |
| N1 | 0.0447 (6) | 0.0544 (7) | 0.0417 (6) | 0.0019 (5) | 0.0228 (5) | −0.0006 (5) |
| N2 | 0.0490 (7) | 0.0566 (7) | 0.0446 (7) | 0.0073 (5) | 0.0296 (5) | 0.0048 (5) |
| N3 | 0.0569 (7) | 0.0541 (7) | 0.0457 (7) | −0.0004 (5) | 0.0299 (6) | 0.0032 (5) |
| C1 | 0.0563 (9) | 0.0936 (13) | 0.0502 (9) | 0.0081 (8) | 0.0304 (7) | 0.0076 (8) |
| C2 | 0.0662 (10) | 0.0974 (15) | 0.0620 (10) | −0.0021 (9) | 0.0438 (9) | −0.0068 (10) |
| C3 | 0.0558 (10) | 0.0863 (14) | 0.0938 (15) | 0.0098 (8) | 0.0457 (10) | −0.0057 (11) |
| C4 | 0.0695 (12) | 0.1019 (16) | 0.0965 (17) | 0.0321 (11) | 0.0423 (12) | 0.0232 (13) |
| C5 | 0.0631 (10) | 0.0820 (12) | 0.0656 (11) | 0.0196 (8) | 0.0353 (8) | 0.0179 (9) |
| C6 | 0.0457 (7) | 0.0643 (9) | 0.0448 (7) | 0.0019 (6) | 0.0244 (6) | −0.0001 (6) |
| C7 | 0.0482 (8) | 0.0673 (9) | 0.0425 (8) | 0.0090 (6) | 0.0245 (6) | 0.0085 (6) |
| C8 | 0.0461 (7) | 0.0452 (7) | 0.0361 (6) | −0.0067 (5) | 0.0215 (5) | −0.0085 (5) |
| F1—C3 | 1.3568 (19) | C1—H1A | 0.9300 |
| O1—C8 | 1.2393 (16) | C2—C3 | 1.355 (3) |
| N1—C7 | 1.2661 (18) | C2—H2A | 0.9300 |
| N1—N2 | 1.3714 (16) | C3—C4 | 1.365 (3) |
| N2—C8 | 1.3634 (17) | C4—C5 | 1.376 (2) |
| N2—H1N2 | 0.90 (2) | C4—H4A | 0.9300 |
| N3—C8 | 1.3333 (18) | C5—C6 | 1.379 (2) |
| N3—H1N3 | 0.87 (2) | C5—H5A | 0.9300 |
| N3—H2N3 | 0.91 (2) | C6—C7 | 1.4621 (19) |
| C1—C2 | 1.390 (2) | C7—H7A | 0.9300 |
| C1—C6 | 1.389 (2) | ||
| C7—N1—N2 | 115.71 (12) | C3—C4—C5 | 118.7 (2) |
| C8—N2—N1 | 119.96 (12) | C3—C4—H4A | 120.6 |
| C8—N2—H1N2 | 118.4 (12) | C5—C4—H4A | 120.6 |
| N1—N2—H1N2 | 120.3 (12) | C4—C5—C6 | 120.79 (17) |
| C8—N3—H1N3 | 115.9 (13) | C4—C5—H5A | 119.6 |
| C8—N3—H2N3 | 120.3 (14) | C6—C5—H5A | 119.6 |
| H1N3—N3—H2N3 | 120 (2) | C5—C6—C1 | 118.85 (14) |
| C2—C1—C6 | 120.56 (17) | C5—C6—C7 | 122.08 (14) |
| C2—C1—H1A | 119.7 | C1—C6—C7 | 119.06 (15) |
| C6—C1—H1A | 119.7 | N1—C7—C6 | 121.99 (14) |
| C3—C2—C1 | 118.24 (16) | N1—C7—H7A | 119.0 |
| C3—C2—H2A | 120.9 | C6—C7—H7A | 119.0 |
| C1—C2—H2A | 120.9 | O1—C8—N3 | 123.66 (12) |
| F1—C3—C2 | 118.27 (19) | O1—C8—N2 | 119.18 (13) |
| F1—C3—C4 | 118.9 (2) | N3—C8—N2 | 117.15 (12) |
| C2—C3—C4 | 122.86 (16) | ||
| C7—N1—N2—C8 | −170.19 (13) | C4—C5—C6—C7 | 178.57 (19) |
| C6—C1—C2—C3 | −0.3 (3) | C2—C1—C6—C5 | 0.3 (3) |
| C1—C2—C3—F1 | −179.4 (2) | C2—C1—C6—C7 | −178.40 (17) |
| C1—C2—C3—C4 | 0.0 (4) | N2—N1—C7—C6 | −177.87 (13) |
| F1—C3—C4—C5 | 179.6 (2) | C5—C6—C7—N1 | 8.7 (3) |
| C2—C3—C4—C5 | 0.2 (4) | C1—C6—C7—N1 | −172.65 (16) |
| C3—C4—C5—C6 | −0.1 (4) | N1—N2—C8—O1 | 178.19 (12) |
| C4—C5—C6—C1 | −0.1 (3) | N1—N2—C8—N3 | −3.3 (2) |
| H··· | ||||
| N3—H1N3···O1i | 0.88 (2) | 2.07 (2) | 2.8954 (19) | 158 (2) |
| N2—H1N2···O1ii | 0.92 (2) | 2.00 (2) | 2.9155 (19) | 179 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N3—H1 | 0.88 (2) | 2.07 (2) | 2.8954 (19) | 158 (2) |
| N2—H1 | 0.92 (2) | 2.00 (2) | 2.9155 (19) | 179 (2) |
Symmetry codes: (i) ; (ii) .