| Literature DB >> 21580151 |
P Parthiban, V Ramkumar, Yeon Tae Jeong.
Abstract
In the crystal structure, the title compound, C(22)H(25)NO(3), exists in a twin-chair conformation with equatorial orientations of the meta-methoxy-phenyl groups on both sides of the secondary amino group. The title compound is a positional isomer of 2,4-bis-(2-methoxy-phen-yl)-3-aza-bicyclo-[3.3.1]nonan-9-one and 2,4-bis-(4-methoxy-phen-yl)-3-aza-bicyclo-[3.3.1]nonan-9-one, which both also exhibit twin-chair conformations with equatorial dispositions of the anisyl rings on both sides of the secondary amino group. In the title compound, the meta-methoxy-phenyl rings are orientated at an angle of 25.02 (3)° with respect to each other, whereas in the ortho and para isomers, the anisyl rings are orientated at dihedral angles of 33.86 (3) and 37.43 (4)°, respectively. The crystal packing is dominated by van der Waals inter-actions and by an inter-molecular N-H⋯O hydrogen bond, whereas in the ortho isomer, an inter-molecular N-H⋯π inter-action (H⋯Cg = 2.75 Å) is found.Entities:
Year: 2009 PMID: 21580151 PMCID: PMC2980113 DOI: 10.1107/S1600536809050697
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C22H25NO3 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2453 reflections |
| θ = 2.9–22.7° | |
| µ = 0.08 mm−1 | |
| β = 106.382 (2)° | Block, colourless |
| 0.40 × 0.28 × 0.15 mm | |
| Bruker APEXII CCD area-detector diffractometer | 3971 independent reflections |
| Radiation source: fine-focus sealed tube | 2326 reflections with |
| graphite | |
| phi and ω scans | θmax = 28.3°, θmin = 2.9° |
| Absorption correction: multi-scan ( | |
| 12835 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3971 reflections | (Δ/σ)max < 0.001 |
| 241 parameters | Δρmax = 0.30 e Å−3 |
| 0 restraints | Δρmin = −0.23 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| C1 | 0.32467 (7) | 0.5186 (3) | 0.49436 (13) | 0.0356 (4) | |
| H1 | 0.3471 | 0.6483 | 0.5098 | 0.043* | |
| C2 | 0.30802 (8) | 0.4800 (3) | 0.37207 (13) | 0.0388 (5) | |
| H2 | 0.3464 | 0.4857 | 0.3502 | 0.047* | |
| C3 | 0.27531 (9) | 0.2775 (3) | 0.33443 (15) | 0.0479 (5) | |
| H3A | 0.2724 | 0.2589 | 0.2596 | 0.057* | |
| H3B | 0.3005 | 0.1674 | 0.3737 | 0.057* | |
| C4 | 0.21054 (10) | 0.2635 (3) | 0.34870 (16) | 0.0573 (6) | |
| H4A | 0.1892 | 0.1478 | 0.3085 | 0.069* | |
| H4B | 0.2141 | 0.2393 | 0.4234 | 0.069* | |
| C5 | 0.17173 (9) | 0.4527 (3) | 0.31292 (15) | 0.0484 (5) | |
| H5A | 0.1356 | 0.4469 | 0.3398 | 0.058* | |
| H5B | 0.1569 | 0.4529 | 0.2357 | 0.058* | |
| C6 | 0.20648 (8) | 0.6525 (3) | 0.34984 (13) | 0.0398 (4) | |
| H6 | 0.1807 | 0.7660 | 0.3133 | 0.048* | |
| C7 | 0.22453 (7) | 0.6922 (3) | 0.47199 (13) | 0.0376 (4) | |
| H7 | 0.2460 | 0.8237 | 0.4860 | 0.045* | |
| C8 | 0.26600 (8) | 0.6491 (3) | 0.31776 (13) | 0.0382 (4) | |
| C9 | 0.36693 (7) | 0.3516 (3) | 0.55456 (12) | 0.0351 (4) | |
| C10 | 0.34445 (8) | 0.1866 (3) | 0.59844 (13) | 0.0430 (5) | |
| H10 | 0.3024 | 0.1796 | 0.5947 | 0.052* | |
| C11 | 0.38393 (9) | 0.0330 (3) | 0.64743 (15) | 0.0495 (5) | |
| H11 | 0.3682 | −0.0761 | 0.6771 | 0.059* | |
| C12 | 0.44674 (9) | 0.0379 (3) | 0.65342 (14) | 0.0489 (5) | |
| H12 | 0.4732 | −0.0664 | 0.6869 | 0.059* | |
| C13 | 0.46919 (8) | 0.2005 (3) | 0.60884 (14) | 0.0419 (5) | |
| C14 | 0.42955 (8) | 0.3570 (3) | 0.56051 (13) | 0.0386 (4) | |
| H14 | 0.4453 | 0.4671 | 0.5317 | 0.046* | |
| C15 | 0.16734 (8) | 0.7034 (3) | 0.51186 (13) | 0.0371 (4) | |
| C16 | 0.13403 (8) | 0.8838 (3) | 0.50128 (15) | 0.0473 (5) | |
| H16 | 0.1471 | 0.9958 | 0.4697 | 0.057* | |
| C17 | 0.08192 (9) | 0.8993 (3) | 0.53688 (16) | 0.0532 (5) | |
| H17 | 0.0604 | 1.0220 | 0.5296 | 0.064* | |
| C18 | 0.06116 (8) | 0.7346 (3) | 0.58332 (15) | 0.0478 (5) | |
| H18 | 0.0258 | 0.7451 | 0.6070 | 0.057* | |
| C19 | 0.09401 (8) | 0.5548 (3) | 0.59381 (14) | 0.0409 (5) | |
| C20 | 0.14652 (8) | 0.5399 (3) | 0.55826 (14) | 0.0403 (5) | |
| H20 | 0.1681 | 0.4173 | 0.5658 | 0.048* | |
| C21 | 0.57145 (9) | 0.0580 (3) | 0.65086 (19) | 0.0692 (7) | |
| H21A | 0.5747 | 0.0431 | 0.7253 | 0.104* | |
| H21B | 0.6118 | 0.0868 | 0.6423 | 0.104* | |
| H21C | 0.5557 | −0.0659 | 0.6141 | 0.104* | |
| C22 | 0.03130 (10) | 0.3935 (4) | 0.69181 (18) | 0.0737 (7) | |
| H22A | 0.0429 | 0.4937 | 0.7474 | 0.111* | |
| H22B | 0.0268 | 0.2633 | 0.7223 | 0.111* | |
| H22C | −0.0075 | 0.4317 | 0.6421 | 0.111* | |
| N1 | 0.26760 (6) | 0.5346 (2) | 0.52819 (12) | 0.0370 (4) | |
| O1 | 0.27803 (6) | 0.7680 (2) | 0.25553 (10) | 0.0548 (4) | |
| O2 | 0.53008 (6) | 0.2212 (2) | 0.60764 (11) | 0.0612 (4) | |
| O3 | 0.07815 (6) | 0.3815 (2) | 0.63810 (11) | 0.0613 (4) | |
| H1N | 0.2775 (8) | 0.558 (3) | 0.5980 (15) | 0.048 (6)* |
| C1 | 0.0318 (9) | 0.0366 (11) | 0.0398 (10) | 0.0004 (8) | 0.0123 (8) | −0.0011 (8) |
| C2 | 0.0399 (10) | 0.0469 (12) | 0.0347 (10) | 0.0054 (9) | 0.0190 (8) | 0.0037 (8) |
| C3 | 0.0630 (13) | 0.0441 (12) | 0.0381 (10) | 0.0039 (10) | 0.0168 (9) | −0.0040 (9) |
| C4 | 0.0650 (14) | 0.0463 (13) | 0.0560 (13) | −0.0119 (11) | 0.0097 (11) | −0.0059 (10) |
| C5 | 0.0440 (11) | 0.0584 (14) | 0.0405 (11) | −0.0084 (10) | 0.0083 (9) | −0.0056 (10) |
| C6 | 0.0372 (10) | 0.0426 (11) | 0.0390 (10) | 0.0050 (8) | 0.0096 (8) | 0.0064 (9) |
| C7 | 0.0341 (9) | 0.0372 (11) | 0.0428 (10) | 0.0001 (8) | 0.0128 (8) | −0.0016 (8) |
| C8 | 0.0431 (10) | 0.0402 (11) | 0.0314 (9) | −0.0028 (9) | 0.0107 (8) | 0.0010 (9) |
| C9 | 0.0369 (10) | 0.0408 (11) | 0.0293 (9) | 0.0022 (8) | 0.0120 (7) | −0.0016 (8) |
| C10 | 0.0375 (10) | 0.0547 (13) | 0.0401 (10) | 0.0012 (9) | 0.0165 (8) | 0.0066 (9) |
| C11 | 0.0554 (12) | 0.0529 (13) | 0.0456 (12) | 0.0049 (10) | 0.0229 (10) | 0.0154 (10) |
| C12 | 0.0512 (12) | 0.0535 (13) | 0.0420 (11) | 0.0125 (10) | 0.0133 (9) | 0.0123 (10) |
| C13 | 0.0333 (10) | 0.0524 (13) | 0.0400 (10) | 0.0034 (9) | 0.0101 (8) | −0.0009 (9) |
| C14 | 0.0362 (10) | 0.0417 (11) | 0.0392 (10) | 0.0000 (8) | 0.0128 (8) | 0.0021 (9) |
| C15 | 0.0339 (9) | 0.0407 (11) | 0.0357 (9) | 0.0034 (8) | 0.0081 (8) | −0.0037 (8) |
| C16 | 0.0430 (11) | 0.0400 (12) | 0.0612 (13) | 0.0041 (9) | 0.0184 (9) | 0.0037 (10) |
| C17 | 0.0451 (12) | 0.0464 (13) | 0.0692 (14) | 0.0152 (10) | 0.0177 (10) | 0.0001 (11) |
| C18 | 0.0355 (10) | 0.0562 (14) | 0.0537 (12) | 0.0086 (10) | 0.0162 (9) | −0.0021 (10) |
| C19 | 0.0383 (10) | 0.0435 (12) | 0.0414 (11) | 0.0041 (9) | 0.0121 (8) | 0.0005 (9) |
| C20 | 0.0382 (10) | 0.0389 (11) | 0.0452 (11) | 0.0104 (8) | 0.0140 (8) | 0.0008 (9) |
| C21 | 0.0418 (12) | 0.0740 (17) | 0.0868 (17) | 0.0182 (11) | 0.0098 (11) | 0.0064 (13) |
| C22 | 0.0694 (15) | 0.0840 (19) | 0.0840 (17) | 0.0043 (13) | 0.0481 (14) | 0.0144 (14) |
| N1 | 0.0325 (8) | 0.0488 (10) | 0.0313 (9) | 0.0070 (7) | 0.0114 (7) | −0.0019 (7) |
| O1 | 0.0582 (9) | 0.0581 (10) | 0.0507 (8) | −0.0021 (7) | 0.0194 (7) | 0.0200 (7) |
| O2 | 0.0350 (8) | 0.0656 (10) | 0.0832 (11) | 0.0114 (7) | 0.0167 (7) | 0.0151 (8) |
| O3 | 0.0600 (9) | 0.0554 (10) | 0.0812 (10) | 0.0095 (7) | 0.0406 (8) | 0.0162 (8) |
| C1—N1 | 1.469 (2) | C11—C12 | 1.386 (3) |
| C1—C9 | 1.516 (2) | C11—H11 | 0.9300 |
| C1—C2 | 1.557 (2) | C12—C13 | 1.378 (3) |
| C1—H1 | 0.9800 | C12—H12 | 0.9300 |
| C2—C8 | 1.498 (2) | C13—O2 | 1.374 (2) |
| C2—C3 | 1.531 (2) | C13—C14 | 1.388 (2) |
| C2—H2 | 0.9800 | C14—H14 | 0.9300 |
| C3—C4 | 1.516 (3) | C15—C20 | 1.378 (2) |
| C3—H3A | 0.9700 | C15—C16 | 1.385 (2) |
| C3—H3B | 0.9700 | C16—C17 | 1.376 (2) |
| C4—C5 | 1.512 (3) | C16—H16 | 0.9300 |
| C4—H4A | 0.9700 | C17—C18 | 1.383 (3) |
| C4—H4B | 0.9700 | C17—H17 | 0.9300 |
| C5—C6 | 1.532 (2) | C18—C19 | 1.378 (2) |
| C5—H5A | 0.9700 | C18—H18 | 0.9300 |
| C5—H5B | 0.9700 | C19—O3 | 1.368 (2) |
| C6—C8 | 1.506 (2) | C19—C20 | 1.384 (2) |
| C6—C7 | 1.555 (2) | C20—H20 | 0.9300 |
| C6—H6 | 0.9800 | C21—O2 | 1.425 (2) |
| C7—N1 | 1.463 (2) | C21—H21A | 0.9600 |
| C7—C15 | 1.514 (2) | C21—H21B | 0.9600 |
| C7—H7 | 0.9800 | C21—H21C | 0.9600 |
| C8—O1 | 1.2119 (19) | C22—O3 | 1.419 (2) |
| C9—C14 | 1.382 (2) | C22—H22A | 0.9600 |
| C9—C10 | 1.386 (2) | C22—H22B | 0.9600 |
| C10—C11 | 1.374 (2) | C22—H22C | 0.9600 |
| C10—H10 | 0.9300 | N1—H1N | 0.890 (18) |
| N1—C1—C9 | 111.34 (13) | C11—C10—H10 | 119.8 |
| N1—C1—C2 | 110.15 (13) | C9—C10—H10 | 119.8 |
| C9—C1—C2 | 110.43 (13) | C10—C11—C12 | 121.21 (18) |
| N1—C1—H1 | 108.3 | C10—C11—H11 | 119.4 |
| C9—C1—H1 | 108.3 | C12—C11—H11 | 119.4 |
| C2—C1—H1 | 108.3 | C13—C12—C11 | 118.63 (18) |
| C8—C2—C3 | 108.17 (15) | C13—C12—H12 | 120.7 |
| C8—C2—C1 | 107.60 (13) | C11—C12—H12 | 120.7 |
| C3—C2—C1 | 115.21 (14) | O2—C13—C12 | 124.24 (17) |
| C8—C2—H2 | 108.6 | O2—C13—C14 | 115.51 (16) |
| C3—C2—H2 | 108.6 | C12—C13—C14 | 120.25 (16) |
| C1—C2—H2 | 108.6 | C9—C14—C13 | 120.99 (17) |
| C4—C3—C2 | 113.59 (15) | C9—C14—H14 | 119.5 |
| C4—C3—H3A | 108.8 | C13—C14—H14 | 119.5 |
| C2—C3—H3A | 108.8 | C20—C15—C16 | 118.10 (16) |
| C4—C3—H3B | 108.8 | C20—C15—C7 | 122.51 (16) |
| C2—C3—H3B | 108.8 | C16—C15—C7 | 119.40 (16) |
| H3A—C3—H3B | 107.7 | C17—C16—C15 | 120.87 (18) |
| C5—C4—C3 | 113.46 (16) | C17—C16—H16 | 119.6 |
| C5—C4—H4A | 108.9 | C15—C16—H16 | 119.6 |
| C3—C4—H4A | 108.9 | C16—C17—C18 | 120.83 (18) |
| C5—C4—H4B | 108.9 | C16—C17—H17 | 119.6 |
| C3—C4—H4B | 108.9 | C18—C17—H17 | 119.6 |
| H4A—C4—H4B | 107.7 | C19—C18—C17 | 118.55 (17) |
| C4—C5—C6 | 114.18 (15) | C19—C18—H18 | 120.7 |
| C4—C5—H5A | 108.7 | C17—C18—H18 | 120.7 |
| C6—C5—H5A | 108.7 | O3—C19—C18 | 124.06 (16) |
| C4—C5—H5B | 108.7 | O3—C19—C20 | 115.45 (16) |
| C6—C5—H5B | 108.7 | C18—C19—C20 | 120.48 (17) |
| H5A—C5—H5B | 107.6 | C15—C20—C19 | 121.17 (16) |
| C8—C6—C5 | 108.04 (15) | C15—C20—H20 | 119.4 |
| C8—C6—C7 | 107.14 (13) | C19—C20—H20 | 119.4 |
| C5—C6—C7 | 115.39 (14) | O2—C21—H21A | 109.5 |
| C8—C6—H6 | 108.7 | O2—C21—H21B | 109.5 |
| C5—C6—H6 | 108.7 | H21A—C21—H21B | 109.5 |
| C7—C6—H6 | 108.7 | O2—C21—H21C | 109.5 |
| N1—C7—C15 | 111.28 (14) | H21A—C21—H21C | 109.5 |
| N1—C7—C6 | 109.93 (14) | H21B—C21—H21C | 109.5 |
| C15—C7—C6 | 111.21 (13) | O3—C22—H22A | 109.5 |
| N1—C7—H7 | 108.1 | O3—C22—H22B | 109.5 |
| C15—C7—H7 | 108.1 | H22A—C22—H22B | 109.5 |
| C6—C7—H7 | 108.1 | O3—C22—H22C | 109.5 |
| O1—C8—C2 | 124.55 (16) | H22A—C22—H22C | 109.5 |
| O1—C8—C6 | 123.99 (16) | H22B—C22—H22C | 109.5 |
| C2—C8—C6 | 111.46 (14) | C7—N1—C1 | 113.91 (13) |
| C14—C9—C10 | 118.53 (17) | C7—N1—H1N | 109.3 (12) |
| C14—C9—C1 | 119.04 (16) | C1—N1—H1N | 109.6 (11) |
| C10—C9—C1 | 122.31 (15) | C13—O2—C21 | 117.20 (16) |
| C11—C10—C9 | 120.39 (17) | C19—O3—C22 | 118.64 (15) |
| N1—C1—C2—C8 | 56.22 (18) | C10—C11—C12—C13 | −0.1 (3) |
| C9—C1—C2—C8 | 179.60 (13) | C11—C12—C13—O2 | −178.66 (17) |
| N1—C1—C2—C3 | −64.51 (19) | C11—C12—C13—C14 | 1.0 (3) |
| C9—C1—C2—C3 | 58.88 (19) | C10—C9—C14—C13 | 0.3 (3) |
| C8—C2—C3—C4 | −53.64 (19) | C1—C9—C14—C13 | −175.81 (15) |
| C1—C2—C3—C4 | 66.8 (2) | O2—C13—C14—C9 | 178.61 (16) |
| C2—C3—C4—C5 | 45.2 (2) | C12—C13—C14—C9 | −1.0 (3) |
| C3—C4—C5—C6 | −44.8 (2) | N1—C7—C15—C20 | −25.2 (2) |
| C4—C5—C6—C8 | 52.4 (2) | C6—C7—C15—C20 | 97.7 (2) |
| C4—C5—C6—C7 | −67.4 (2) | N1—C7—C15—C16 | 155.10 (16) |
| C8—C6—C7—N1 | −57.64 (18) | C6—C7—C15—C16 | −82.0 (2) |
| C5—C6—C7—N1 | 62.69 (18) | C20—C15—C16—C17 | 0.5 (3) |
| C8—C6—C7—C15 | 178.66 (15) | C7—C15—C16—C17 | −179.85 (16) |
| C5—C6—C7—C15 | −61.0 (2) | C15—C16—C17—C18 | −0.6 (3) |
| C3—C2—C8—O1 | −116.08 (19) | C16—C17—C18—C19 | 0.4 (3) |
| C1—C2—C8—O1 | 118.86 (18) | C17—C18—C19—O3 | −179.87 (18) |
| C3—C2—C8—C6 | 63.68 (17) | C17—C18—C19—C20 | −0.2 (3) |
| C1—C2—C8—C6 | −61.37 (18) | C16—C15—C20—C19 | −0.3 (3) |
| C5—C6—C8—O1 | 116.90 (19) | C7—C15—C20—C19 | −179.91 (15) |
| C7—C6—C8—O1 | −118.19 (18) | O3—C19—C20—C15 | 179.84 (16) |
| C5—C6—C8—C2 | −62.87 (18) | C18—C19—C20—C15 | 0.1 (3) |
| C7—C6—C8—C2 | 62.04 (19) | C15—C7—N1—C1 | −178.96 (13) |
| N1—C1—C9—C14 | −158.74 (15) | C6—C7—N1—C1 | 57.38 (18) |
| C2—C1—C9—C14 | 78.57 (19) | C9—C1—N1—C7 | −179.40 (14) |
| N1—C1—C9—C10 | 25.3 (2) | C2—C1—N1—C7 | −56.55 (19) |
| C2—C1—C9—C10 | −97.36 (18) | C12—C13—O2—C21 | 3.2 (3) |
| C14—C9—C10—C11 | 0.5 (3) | C14—C13—O2—C21 | −176.39 (17) |
| C1—C9—C10—C11 | 176.49 (16) | C18—C19—O3—C22 | −10.4 (3) |
| C9—C10—C11—C12 | −0.6 (3) | C20—C19—O3—C22 | 169.87 (17) |
| H··· | ||||
| N1—H1N···O1i | 0.890 (18) | 2.352 (18) | 3.1901 (19) | 157.0 (16) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.890 (18) | 2.352 (18) | 3.1901 (19) | 157.0 (16) |
Symmetry code: (i) .