| Literature DB >> 21579399 |
Jia Hao Goh, Hoong-Kun Fun, B Kalluraya.
Abstract
In the title compound, C(10)H(8)N(2)O(3), the oxadiazole ring is essentially planar, with a maximum deviation of 0.006 (1) Å for the two-connected N atom. The mean planes through the aldehyde unit and the methyl-substituted phenyl ring make inter-planar angles of 13.60 (9) and 59.69 (4)°, respectively, with the oxadiazole ring. In the crystal structure, adjacent mol-ecules are inter-connected into a two-dimensional array parallel to (100) by inter-molecular C-H⋯O hydrogen bonds.Entities:
Year: 2010 PMID: 21579399 PMCID: PMC2979510 DOI: 10.1107/S1600536810016417
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H8N2O3 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 6788 reflections |
| θ = 2.8–38.9° | |
| µ = 0.11 mm−1 | |
| β = 108.222 (1)° | Block, brown |
| 0.71 × 0.30 × 0.19 mm | |
| Bruker APEXII DUO CCD area-detector diffractometer | 4906 independent reflections |
| Radiation source: fine-focus sealed tube | 4091 reflections with |
| graphite | |
| φ and ω scans | θmax = 37.5°, θmin = 2.8° |
| Absorption correction: multi-scan ( | |
| 14437 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4906 reflections | (Δ/σ)max = 0.001 |
| 137 parameters | Δρmax = 0.65 e Å−3 |
| 0 restraints | Δρmin = −0.31 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1)K. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| O1 | 0.34006 (6) | 0.22147 (5) | 0.96639 (6) | 0.01912 (11) | |
| O2 | 0.26550 (6) | 0.39559 (5) | 1.06918 (7) | 0.02245 (12) | |
| O3 | 0.53489 (6) | 0.55203 (5) | 1.23353 (7) | 0.02190 (12) | |
| N1 | 0.54958 (6) | 0.24689 (5) | 1.05402 (6) | 0.01524 (10) | |
| N2 | 0.45929 (7) | 0.17063 (6) | 0.96707 (7) | 0.01825 (11) | |
| C1 | 0.76823 (8) | 0.30000 (7) | 1.03217 (9) | 0.02080 (13) | |
| H1A | 0.7346 | 0.3773 | 0.9839 | 0.025* | |
| C2 | 0.90126 (8) | 0.26687 (7) | 1.05976 (10) | 0.02297 (14) | |
| H2A | 0.9571 | 0.3228 | 1.0289 | 0.028* | |
| C3 | 0.95243 (8) | 0.15115 (7) | 1.13297 (9) | 0.02082 (13) | |
| C4 | 0.86671 (8) | 0.06713 (7) | 1.17625 (9) | 0.02117 (13) | |
| H4A | 0.8996 | −0.0106 | 1.2238 | 0.025* | |
| C5 | 0.73342 (8) | 0.09745 (6) | 1.14961 (8) | 0.01803 (12) | |
| H5A | 0.6768 | 0.0411 | 1.1783 | 0.022* | |
| C6 | 0.68736 (7) | 0.21424 (6) | 1.07890 (7) | 0.01561 (11) | |
| C7 | 0.35989 (7) | 0.33640 (6) | 1.05605 (8) | 0.01719 (12) | |
| C8 | 0.50088 (7) | 0.34990 (6) | 1.11215 (8) | 0.01566 (11) | |
| C9 | 0.58136 (8) | 0.44999 (6) | 1.20780 (8) | 0.01744 (12) | |
| H9A | 0.6724 | 0.4362 | 1.2517 | 0.021* | |
| C10 | 1.09685 (9) | 0.11710 (10) | 1.16471 (12) | 0.03014 (17) | |
| H10D | 1.1460 | 0.1928 | 1.1562 | 0.045* | |
| H10A | 1.1048 | 0.0545 | 1.0895 | 0.045* | |
| H10B | 1.1319 | 0.0823 | 1.2687 | 0.045* |
| O1 | 0.0194 (2) | 0.0159 (2) | 0.0216 (2) | 0.00027 (17) | 0.00558 (19) | −0.00320 (16) |
| O2 | 0.0212 (3) | 0.0188 (2) | 0.0285 (3) | 0.00347 (18) | 0.0094 (2) | −0.00196 (18) |
| O3 | 0.0306 (3) | 0.0144 (2) | 0.0250 (2) | −0.00230 (19) | 0.0148 (2) | −0.00363 (17) |
| N1 | 0.0194 (3) | 0.01228 (19) | 0.0155 (2) | −0.00027 (17) | 0.00755 (19) | −0.00047 (15) |
| N2 | 0.0206 (3) | 0.0153 (2) | 0.0194 (2) | −0.00021 (19) | 0.0070 (2) | −0.00313 (17) |
| C1 | 0.0255 (3) | 0.0152 (2) | 0.0263 (3) | −0.0009 (2) | 0.0148 (3) | 0.0028 (2) |
| C2 | 0.0243 (3) | 0.0202 (3) | 0.0294 (3) | −0.0039 (2) | 0.0157 (3) | −0.0007 (2) |
| C3 | 0.0195 (3) | 0.0230 (3) | 0.0216 (3) | −0.0007 (2) | 0.0089 (2) | −0.0034 (2) |
| C4 | 0.0220 (3) | 0.0192 (3) | 0.0237 (3) | 0.0025 (2) | 0.0091 (3) | 0.0025 (2) |
| C5 | 0.0207 (3) | 0.0143 (2) | 0.0211 (3) | 0.0000 (2) | 0.0095 (2) | 0.00184 (19) |
| C6 | 0.0186 (3) | 0.0133 (2) | 0.0172 (2) | −0.00044 (19) | 0.0088 (2) | −0.00029 (17) |
| C7 | 0.0210 (3) | 0.0134 (2) | 0.0179 (2) | 0.0007 (2) | 0.0072 (2) | −0.00046 (18) |
| C8 | 0.0195 (3) | 0.0127 (2) | 0.0166 (2) | 0.0000 (2) | 0.0083 (2) | −0.00152 (17) |
| C9 | 0.0220 (3) | 0.0149 (2) | 0.0178 (2) | −0.0033 (2) | 0.0097 (2) | −0.00218 (19) |
| C10 | 0.0195 (3) | 0.0387 (4) | 0.0328 (4) | 0.0012 (3) | 0.0091 (3) | −0.0044 (3) |
| O1—N2 | 1.3647 (8) | C3—C4 | 1.3983 (11) |
| O1—C7 | 1.4197 (8) | C3—C10 | 1.5046 (12) |
| O2—C7 | 1.2089 (9) | C4—C5 | 1.3893 (11) |
| O3—C9 | 1.2220 (9) | C4—H4A | 0.9300 |
| N1—N2 | 1.2971 (8) | C5—C6 | 1.3870 (9) |
| N1—C8 | 1.3615 (8) | C5—H5A | 0.9300 |
| N1—C6 | 1.4428 (9) | C7—C8 | 1.4225 (10) |
| C1—C6 | 1.3878 (9) | C8—C9 | 1.4448 (9) |
| C1—C2 | 1.3924 (11) | C9—H9A | 0.9300 |
| C1—H1A | 0.9300 | C10—H10D | 0.9600 |
| C2—C3 | 1.3971 (11) | C10—H10A | 0.9600 |
| C2—H2A | 0.9300 | C10—H10B | 0.9600 |
| N2—O1—C7 | 110.58 (5) | C4—C5—H5A | 121.0 |
| N2—N1—C8 | 114.64 (6) | C5—C6—C1 | 122.72 (7) |
| N2—N1—C6 | 117.76 (5) | C5—C6—N1 | 118.03 (6) |
| C8—N1—C6 | 127.60 (6) | C1—C6—N1 | 119.25 (6) |
| N1—N2—O1 | 105.66 (5) | O2—C7—O1 | 120.29 (7) |
| C6—C1—C2 | 118.02 (7) | O2—C7—C8 | 136.05 (6) |
| C6—C1—H1A | 121.0 | O1—C7—C8 | 103.66 (5) |
| C2—C1—H1A | 121.0 | N1—C8—C7 | 105.44 (6) |
| C1—C2—C3 | 121.19 (7) | N1—C8—C9 | 124.90 (6) |
| C1—C2—H2A | 119.4 | C7—C8—C9 | 129.64 (6) |
| C3—C2—H2A | 119.4 | O3—C9—C8 | 122.82 (7) |
| C2—C3—C4 | 118.71 (7) | O3—C9—H9A | 118.6 |
| C2—C3—C10 | 120.83 (7) | C8—C9—H9A | 118.6 |
| C4—C3—C10 | 120.45 (7) | C3—C10—H10D | 109.5 |
| C5—C4—C3 | 121.34 (7) | C3—C10—H10A | 109.5 |
| C5—C4—H4A | 119.3 | H10D—C10—H10A | 109.5 |
| C3—C4—H4A | 119.3 | C3—C10—H10B | 109.5 |
| C6—C5—C4 | 118.01 (6) | H10D—C10—H10B | 109.5 |
| C6—C5—H5A | 121.0 | H10A—C10—H10B | 109.5 |
| C8—N1—N2—O1 | −1.23 (7) | N2—N1—C6—C1 | 120.44 (7) |
| C6—N1—N2—O1 | 178.51 (5) | C8—N1—C6—C1 | −59.85 (9) |
| C7—O1—N2—N1 | 1.09 (7) | N2—O1—C7—O2 | 179.97 (6) |
| C6—C1—C2—C3 | −0.31 (11) | N2—O1—C7—C8 | −0.58 (7) |
| C1—C2—C3—C4 | 1.07 (12) | N2—N1—C8—C7 | 0.88 (7) |
| C1—C2—C3—C10 | −178.99 (8) | C6—N1—C8—C7 | −178.84 (6) |
| C2—C3—C4—C5 | −0.81 (11) | N2—N1—C8—C9 | −178.07 (6) |
| C10—C3—C4—C5 | 179.25 (7) | C6—N1—C8—C9 | 2.22 (10) |
| C3—C4—C5—C6 | −0.19 (11) | O2—C7—C8—N1 | 179.18 (8) |
| C4—C5—C6—C1 | 1.01 (11) | O1—C7—C8—N1 | −0.13 (7) |
| C4—C5—C6—N1 | −178.80 (6) | O2—C7—C8—C9 | −1.94 (13) |
| C2—C1—C6—C5 | −0.76 (11) | O1—C7—C8—C9 | 178.74 (6) |
| C2—C1—C6—N1 | 179.05 (6) | N1—C8—C9—O3 | 166.06 (6) |
| N2—N1—C6—C5 | −59.74 (8) | C7—C8—C9—O3 | −12.62 (11) |
| C8—N1—C6—C5 | 119.96 (7) |
| H··· | ||||
| C1—H1A···O2i | 0.93 | 2.41 | 3.2847 (9) | 156 |
| C5—H5A···O3ii | 0.93 | 2.60 | 3.3489 (11) | 138 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C1—H1 | 0.93 | 2.41 | 3.2847 (9) | 156 |
| C5—H5 | 0.93 | 2.60 | 3.3489 (11) | 138 |
Symmetry codes: (i) ; (ii) .