| Literature DB >> 21352473 |
Christopher M Heaphy1, Alan K Meeker.
Abstract
The role telomeres and telomerase play in the initiation and progression of human cancers has been extensively evaluated. Telomeres are nucleoprotein complexes comprising the hexanucleotide DNA repeat sequence, TTAGGG and numerous telomere-associated proteins, including the six member Shelterin complex. The main function of the telomere is to stabilize the ends of the chromosomes. However, through multiple mechanisms, telomeres can become dysfunctional, which may drive genomic instability leading to the development of cancer. The majority of human cancers maintain, or actively lengthen, telomeres through up-regulation of the reverse transcriptase telomerase. Because there are significant differences in telomere length and telomerase activity between malignant and non-malignant tissues, many investigations have assessed the potential to utilize these molecular markers for cancer diagnosis. Here, we critically evaluate whether measurements of telomere lengths and telomerase levels may be clinically utilized as diagnostic markers in solid tumours, with emphasis on breast and prostate cancer as representative examples. Future directions focusing on the direct detection of dysfunctional telomeres are explored. New markers for telomere dysfunction may eventually prove clinically useful.Entities:
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Year: 2011 PMID: 21352473 PMCID: PMC4373325 DOI: 10.1111/j.1582-4934.2011.01284.x
Source DB: PubMed Journal: J Cell Mol Med ISSN: 1582-1838 Impact factor: 5.310
Telomere length and telomerase detection methods: strengths and limitations
| TRF Southern blot analysis | Widely used; provides telomere length distributions | Requires relatively large amounts of DNA (μg range); inclusion of sub-telomeric regions in the telomere length estimation; variability in interpretation; relatively laborious; cannot be used on fixed tissues | [ |
| Q-FISH | Allows telomere length assessment in fixed material; provides single cell resolution while maintaining tissue architecture; allows identification of telomere lengths in specific cell types | Although quantitative analysis may be performed, values are relative telomere measurements, not actual length | [ |
| Flow-FISH | Average telomere lengths can be quantitated; provides a distribution of telomere lengths | Relatively laborious; can only be used on single cell suspensions, such as blood leucocyte samples; cannot be used on fixed tissues | [ |
| Slot blot assay | Low DNA input requirement (ηg range); can used on fixed tissues | Provides mean telomere content (not length); does not provide a distribution of telomere lengths; no identification of telomere lengths from specific cell types | [ |
| Quantitative telomere-specific PCR (Q-PCR) | High-throughput analysis allows for assessment of large sample sets; requires low DNA input (ηg range) | Provides mean relative telomere content (not length); no distribution of telomere lengths within a particular sample; not easily performed on fixed tissues | [ |
| STELA | Can be used to detect telomere lengths from specific, individual chromosomes; can identity extremely short telomeres | Relatively laborious; primers for all chromosome arms have not been developed; may not detect extremely long telomeres | [ |
| TRAP | ‘Gold-standard’ for telomerase activity measurements; need for only small amount of cells | Relatively laborious; hard to quantify; need for appropriate controls | [ |
| Detection of transcript levels of hTERT or hTR by RT-PCR | Allows for quantitative measurement of the specific subunits; fairly high throughput; can detect slice variants | mRNA expression levels of hTERT may not directly correlate with telomerase activity due to post-transcriptional processes | |
| Detection of transcript levels of hTERT or hTR by | Allows for detection and visualization of transcripts at single cell level; allows for detection in specific cell types | Detection of transcripts does not always correlate with telomerase activity; decreased sensitivity due to low abundance of hTERT may be problematic | |
Fig 1Model depicting the possible relationships between telomere lengths, telomerase activity and telomere dysfunction in human carcinomas. Telomere length analysis by FISH from representative examples of tumours displaying (A) extremely diminished telomere signals in cancer cells, (B) comparable telomere intensities in cancer cells and benign stromal cells, (C) extremely bright telomere signals in cancer cells compared to benign stromal cells and (D) heterogeneous cancer cell telomere lengths varying from extremely short to relatively long. For the images (original magnification ×400), the DNA is stained with DAPI (blue) and telomeric DNA is stained with a Cy3-labeled telomere-specific peptide nucleic acid probe (red). Below each panel is a proposed model depicting the telomere length distributions in each tumour and the relationship to telomere dysfunction. The critical threshold levels for telomere function for critically short and abnormally long telomeres are shown (dashed red lines). Although ∼90% of tumours display telomerase activity, the cancer cell telomere lengths may vary drastically. Thus, ongoing investigations into the cause of telomere dysfunction may unravel new molecular markers with potential translational utility.