Literature DB >> 20719875

Getting past the RNA world: the initial Darwinian ancestor.

Michael Yarus1.   

Abstract

A little-noted result of the confirmation of multiple premises of the RNA-world hypothesis is that we now know something about the dawn organisms that followed the origin of life, perhaps over 4 billion years ago. We are therefore in an improved position to reason about the biota just before RNA times, during the era of the first replicators, the first Darwinian creatures on Earth. An RNA congener still prominent in modern biology is a plausible descendent of these first replicators.

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Year:  2011        PMID: 20719875      PMCID: PMC3062219          DOI: 10.1101/cshperspect.a003590

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  44 in total

Review 1.  Origins of the genetic code: the escaped triplet theory.

Authors:  Michael Yarus; J Gregory Caporaso; Rob Knight
Journal:  Annu Rev Biochem       Date:  2005       Impact factor: 23.643

2.  The origin of replicators and reproducers.

Authors:  Eörs Szathmáry
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2006-10-29       Impact factor: 6.237

3.  Selection of an improved RNA polymerase ribozyme with superior extension and fidelity.

Authors:  Hani S Zaher; Peter J Unrau
Journal:  RNA       Date:  2007-07       Impact factor: 4.942

4.  The origin of the RNA world: co-evolution of genes and metabolism.

Authors:  Shelley D Copley; Eric Smith; Harold J Morowitz
Journal:  Bioorg Chem       Date:  2007-09-25       Impact factor: 5.275

Review 5.  RNA-amino acid binding: a stereochemical era for the genetic code.

Authors:  Michael Yarus; Jeremy Joseph Widmann; Rob Knight
Journal:  J Mol Evol       Date:  2009-10-01       Impact factor: 2.395

6.  Self-sustained replication of an RNA enzyme.

Authors:  Tracey A Lincoln; Gerald F Joyce
Journal:  Science       Date:  2009-01-08       Impact factor: 47.728

7.  Generation of long RNA chains in water.

Authors:  Giovanna Costanzo; Samanta Pino; Fabiana Ciciriello; Ernesto Di Mauro
Journal:  J Biol Chem       Date:  2009-10-02       Impact factor: 5.157

8.  Site-specific incorporation of functional components into RNA by transcription using unnatural base pair systems.

Authors:  Michiko Kimoto; Akira Sato; Rie Kawai; Shigeyuki Yokoyama; Ichiro Hirao
Journal:  Nucleic Acids Symp Ser (Oxf)       Date:  2009

Review 9.  Re-capping the message.

Authors:  Daniel R Schoenberg; Lynne E Maquat
Journal:  Trends Biochem Sci       Date:  2009-09-02       Impact factor: 13.807

10.  Enzymatic incorporation of a third nucleobase pair.

Authors:  Zunyi Yang; A Michael Sismour; Pinpin Sheng; Nyssa L Puskar; Steven A Benner
Journal:  Nucleic Acids Res       Date:  2007-06-18       Impact factor: 16.971

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  27 in total

1.  Small aminoacyl transfer centers at GU within a larger RNA.

Authors:  Mali Illangasekare; Michael Yarus
Journal:  RNA Biol       Date:  2012-01-01       Impact factor: 4.652

2.  Darwinian evolution of an alternative genetic system provides support for TNA as an RNA progenitor.

Authors:  Hanyang Yu; Su Zhang; John C Chaput
Journal:  Nat Chem       Date:  2012-01-10       Impact factor: 24.427

Review 3.  Setting the stage: the history, chemistry, and geobiology behind RNA.

Authors:  Steven A Benner; Hyo-Joong Kim; Zunyi Yang
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-01-01       Impact factor: 10.005

4.  The RNA worlds in context.

Authors:  Thomas R Cech
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-07-01       Impact factor: 10.005

5.  Origins and emergent evolution of life: the colloid microsphere hypothesis revisited.

Authors:  Richard Egel
Journal:  Orig Life Evol Biosph       Date:  2014-09-11       Impact factor: 1.950

6.  The phylogenomic roots of modern biochemistry: origins of proteins, cofactors and protein biosynthesis.

Authors:  Gustavo Caetano-Anollés; Kyung Mo Kim; Derek Caetano-Anollés
Journal:  J Mol Evol       Date:  2012-01-01       Impact factor: 2.395

7.  A Proposal of the Ur-proteome.

Authors:  Miryam Palacios-Pérez; Fernando Andrade-Díaz; Marco V José
Journal:  Orig Life Evol Biosph       Date:  2017-11-10       Impact factor: 1.950

8.  In the Beginning was a Mutualism - On the Origin of Translation.

Authors:  Marko Vitas; Andrej Dobovišek
Journal:  Orig Life Evol Biosph       Date:  2018-04-30       Impact factor: 1.950

Review 9.  Fougerite: the not so simple progenitor of the first cells.

Authors:  Simon Duval; Frauke Baymann; Barbara Schoepp-Cothenet; Fabienne Trolard; Guilhem Bourrié; Olivier Grauby; Elbert Branscomb; Michael J Russell; Wolfgang Nitschke
Journal:  Interface Focus       Date:  2019-10-18       Impact factor: 3.906

Review 10.  The persistent contributions of RNA to eukaryotic gen(om)e architecture and cellular function.

Authors:  Jürgen Brosius
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-07-31       Impact factor: 10.005

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