Literature DB >> 17008217

The origin of replicators and reproducers.

Eörs Szathmáry1.   

Abstract

Replicators are fundamental to the origin of life and evolvability. Their survival depends on the accuracy of replication and the efficiency of growth relative to spontaneous decay. Infrabiological systems are built of two coupled autocatalytic systems, in contrast to minimal living systems that must comprise at least a metabolic subsystem, a hereditary subsystem and a boundary, serving respective functions. Some scenarios prefer to unite all these functions into one primordial system, as illustrated in the lipid world scenario, which is considered as a didactic example in detail. Experimentally produced chemical replicators grow parabolically owing to product inhibition. A selection consequence is survival of everybody. The chromatographized replicator model predicts that such replicators spreading on surfaces can be selected for higher replication rate because double strands are washed away slower than single strands from the surface. Analysis of real ribozymes suggests that the error threshold of replication is less severe by about one order of magnitude than thought previously. Surface-bound dynamics is predicted to play a crucial role also for exponential replicators: unlinked genes belonging to the same genome do not displace each other by competition, and efficient and accurate replicases can spread. The most efficient form of such useful population structure is encapsulation by reproducing vesicles. The stochastic corrector model shows how such a bag of genes can survive, and what the role of chromosome formation and intragenic recombination could be. Prebiotic and early evolution cannot be understood without the models of dynamics.

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Year:  2006        PMID: 17008217      PMCID: PMC1664675          DOI: 10.1098/rstb.2006.1912

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  46 in total

1.  A model of prebiotic replication: survival of the fittest versus extinction of the unfittest.

Authors:  S Lifson; H Lifson
Journal:  J Theor Biol       Date:  1999-08-21       Impact factor: 2.691

2.  The evolution of replicators.

Authors:  E Szathmáry
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2000-11-29       Impact factor: 6.237

3.  Synthesizing life.

Authors:  J W Szostak; D P Bartel; P L Luisi
Journal:  Nature       Date:  2001-01-18       Impact factor: 49.962

4.  Survival of replicators with parabolic growth tendency and exponential decay.

Authors:  I Scheuring; E Szathmáry
Journal:  J Theor Biol       Date:  2001-09-07       Impact factor: 2.691

5.  Open problems in artificial life.

Authors:  M A Bedau; J S McCaskill; N H Packard; S Rasmussen; C Adami; D G Green; T Ikegami; K Kaneko; T S Ray
Journal:  Artif Life       Date:  2000       Impact factor: 0.667

Review 6.  A case for the extreme antiquity of recombination.

Authors:  Niles Lehman
Journal:  J Mol Evol       Date:  2003-06       Impact factor: 2.395

Review 7.  Determination of the core of a minimal bacterial gene set.

Authors:  Rosario Gil; Francisco J Silva; Juli Peretó; Andrés Moya
Journal:  Microbiol Mol Biol Rev       Date:  2004-09       Impact factor: 11.056

Review 8.  Groundworks for an evolutionary biochemistry: the iron-sulphur world.

Authors:  G Wächtershäuser
Journal:  Prog Biophys Mol Biol       Date:  1992       Impact factor: 3.667

9.  Recombination in primeval genomes: a step forward but still a long leap from maintaining a sizable genome.

Authors:  Mauro Santos; Elias Zintzaras; Eörs Szathmáry
Journal:  J Mol Evol       Date:  2004-10       Impact factor: 2.395

10.  When does the good of the group override the advantage of the individual?

Authors:  E G Leigh
Journal:  Proc Natl Acad Sci U S A       Date:  1983-05       Impact factor: 11.205

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  53 in total

Review 1.  Getting past the RNA world: the initial Darwinian ancestor.

Authors:  Michael Yarus
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-04-01       Impact factor: 10.005

2.  Self-replication: spelling it out in a chemical background.

Authors:  Wentao Ma; Chunwu Yu; Wentao Zhang; Ping Zhou; Jiming Hu
Journal:  Theory Biosci       Date:  2010-12-21       Impact factor: 1.919

3.  Template directed replication supports the maintenance of the metabolically coupled replicator system.

Authors:  Balázs Könnyű; Tamás Czárán
Journal:  Orig Life Evol Biosph       Date:  2015-03-11       Impact factor: 1.950

4.  Introduction: Conditions for the emergence of life on the early Earth.

Authors:  Sydney Leach; Ian W M Smith; Charles S Cockell
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2006-10-29       Impact factor: 6.237

5.  The role of complex formation and deleterious mutations for the stability of RNA-like replicator systems.

Authors:  Nobuto Takeuchi; Paulien Hogeweg
Journal:  J Mol Evol       Date:  2007-10-23       Impact factor: 2.395

6.  Evolution in biological and nonbiological systems under different mechanisms of generation and inheritance.

Authors:  Isaac Salazar-Ciudad
Journal:  Theory Biosci       Date:  2008-10-23       Impact factor: 1.919

7.  Scaling down DNA circuits with competitive neural networks.

Authors:  Anthony J Genot; Teruo Fujii; Yannick Rondelez
Journal:  J R Soc Interface       Date:  2013-06-12       Impact factor: 4.118

8.  Dynamics of a laterally evolving community of ribozyme-like agents as studied with a rule-based computing system.

Authors:  Matti Jalasvuori; Maija P Jalasvuori; Jaana K H Bamford
Journal:  Orig Life Evol Biosph       Date:  2009-12-12       Impact factor: 1.950

9.  Lack of evolvability in self-sustaining autocatalytic networks constraints metabolism-first scenarios for the origin of life.

Authors:  Vera Vasas; Eörs Szathmáry; Mauro Santos
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-04       Impact factor: 11.205

10.  On the spectrum of prebiotic chemical systems.

Authors:  Rodrick Wallace; Robert G Wallace
Journal:  Orig Life Evol Biosph       Date:  2008-09-06       Impact factor: 1.950

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