Literature DB >> 19729311

Re-capping the message.

Daniel R Schoenberg1, Lynne E Maquat.   

Abstract

The 5'-cap structure that typifies all polymerase II-transcribed RNAs plays important roles in pre-mRNA processing and mRNA export, translation and quality control. Removal of the cap is a regulated process that is considered to be the first irreversible step in mRNA decay. An emerging view challenges this idea: mRNAs have been identified in pan class="Species">mammalian cells that lack sequences from their 5' ends but nevertheless appear to be modified with a cap or cap-like structure. Furthermore, a cytoplasmic form of capping enzyme was recently identified that, together with a novel kinase, generates capped ends from cleaved RNAs. These and other findings provide evidence for re-capping and its possible functions.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19729311      PMCID: PMC2743798          DOI: 10.1016/j.tibs.2009.05.003

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  65 in total

Review 1.  Quality control of eukaryotic mRNA: safeguarding cells from abnormal mRNA function.

Authors:  Olaf Isken; Lynne E Maquat
Journal:  Genes Dev       Date:  2007-08-01       Impact factor: 11.361

2.  MicroRNA inhibition of translation initiation in vitro by targeting the cap-binding complex eIF4F.

Authors:  Géraldine Mathonnet; Marc R Fabian; Yuri V Svitkin; Armen Parsyan; Laurent Huck; Takayuki Murata; Stefano Biffo; William C Merrick; Edward Darzynkiewicz; Ramesh S Pillai; Witold Filipowicz; Thomas F Duchaine; Nahum Sonenberg
Journal:  Science       Date:  2007-07-26       Impact factor: 47.728

Review 3.  Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?

Authors:  Witold Filipowicz; Suvendra N Bhattacharyya; Nahum Sonenberg
Journal:  Nat Rev Genet       Date:  2008-02       Impact factor: 53.242

Review 4.  Let me count the ways: mechanisms of gene regulation by miRNAs and siRNAs.

Authors:  Ligang Wu; Joel G Belasco
Journal:  Mol Cell       Date:  2008-01-18       Impact factor: 17.970

Review 5.  eIF4E, the mRNA cap-binding protein: from basic discovery to translational research.

Authors:  Nahum Sonenberg
Journal:  Biochem Cell Biol       Date:  2008-04       Impact factor: 3.626

6.  Transcriptome-wide analysis of uncapped mRNAs in Arabidopsis reveals regulation of mRNA degradation.

Authors:  Yuling Jiao; José Luis Riechmann; Elliot M Meyerowitz
Journal:  Plant Cell       Date:  2008-10-24       Impact factor: 11.277

Review 7.  The multiple lives of NMD factors: balancing roles in gene and genome regulation.

Authors:  Olaf Isken; Lynne E Maquat
Journal:  Nat Rev Genet       Date:  2008-09       Impact factor: 53.242

8.  A link between RNA metabolism and silencing affecting Arabidopsis development.

Authors:  Brian D Gregory; Ronan C O'Malley; Ryan Lister; Mark A Urich; Julian Tonti-Filippini; Huaming Chen; A Harvey Millar; Joseph R Ecker
Journal:  Dev Cell       Date:  2008-05-22       Impact factor: 12.270

9.  Poly(A)-binding protein-interacting protein 1 binds to eukaryotic translation initiation factor 3 to stimulate translation.

Authors:  Yvan Martineau; Mélanie C Derry; Xiaoshan Wang; Akiko Yanagiya; Juan José Berlanga; Ann-Bin Shyu; Hiroaki Imataka; Kalle Gehring; Nahum Sonenberg
Journal:  Mol Cell Biol       Date:  2008-08-25       Impact factor: 4.272

10.  Deadenylation is prerequisite for P-body formation and mRNA decay in mammalian cells.

Authors:  Dinghai Zheng; Nader Ezzeddine; Chyi-Ying A Chen; Wenmiao Zhu; Xiangwei He; Ann-Bin Shyu
Journal:  J Cell Biol       Date:  2008-07-14       Impact factor: 10.539

View more
  50 in total

Review 1.  Biological significance of RNA editing in cells.

Authors:  Wei Tang; Yongjun Fei; Michael Page
Journal:  Mol Biotechnol       Date:  2012-09       Impact factor: 2.695

Review 2.  Metazoan promoters: emerging characteristics and insights into transcriptional regulation.

Authors:  Boris Lenhard; Albin Sandelin; Piero Carninci
Journal:  Nat Rev Genet       Date:  2012-03-06       Impact factor: 53.242

Review 3.  Getting past the RNA world: the initial Darwinian ancestor.

Authors:  Michael Yarus
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-04-01       Impact factor: 10.005

4.  Regulated post-transcriptional RNA cleavage diversifies the eukaryotic transcriptome.

Authors:  Tim R Mercer; Marcel E Dinger; Cameron P Bracken; Gabriel Kolle; Jan M Szubert; Darren J Korbie; Marjan E Askarian-Amiri; Brooke B Gardiner; Gregory J Goodall; Sean M Grimmond; John S Mattick
Journal:  Genome Res       Date:  2010-11-02       Impact factor: 9.043

5.  mRNA 5' ends targeted by cytoplasmic recapping cluster at CAGE tags and select transcripts are alternatively spliced.

Authors:  Mikaela R Berger; Rolando Alvarado; Daniel L Kiss
Journal:  FEBS Lett       Date:  2019-03-09       Impact factor: 4.124

6.  The messenger RNA decapping and recapping pathway in Trypanosoma.

Authors:  Anna V Ignatochkina; Yuko Takagi; Yancheng Liu; Kyosuke Nagata; C Kiong Ho
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-18       Impact factor: 11.205

7.  Two methods for full-length RNA sequencing for low quantities of cells and single cells.

Authors:  Xinghua Pan; Russell E Durrett; Haiying Zhu; Yoshiaki Tanaka; Yumei Li; Xiaoyuan Zi; Sadie L Marjani; Ghia Euskirchen; Chao Ma; Robert H Lamotte; In-Hyun Park; Michael P Snyder; Christopher E Mason; Sherman M Weissman
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-24       Impact factor: 11.205

8.  A differential sequencing-based analysis of the C. elegans noncoding transcriptome.

Authors:  Tengfei Xiao; Yunfei Wang; Huaxia Luo; Lihui Liu; Guifeng Wei; Xiaowei Chen; Yu Sun; Xiaomin Chen; Geir Skogerbø; Runsheng Chen
Journal:  RNA       Date:  2012-02-16       Impact factor: 4.942

Review 9.  Eukaryotic RNA 5'-End NAD+ Capping and DeNADding.

Authors:  Megerditch Kiledjian
Journal:  Trends Cell Biol       Date:  2018-03-12       Impact factor: 20.808

10.  Genome-wide characterization of methylguanosine-capped and polyadenylated small RNAs in the rice blast fungus Magnaporthe oryzae.

Authors:  Malali Gowda; Cristiano C Nunes; Joshua Sailsbery; Minfeng Xue; Feng Chen; Cassie A Nelson; Douglas E Brown; Yeonyee Oh; Shaowu Meng; Thomas Mitchell; Curt H Hagedorn; Ralph A Dean
Journal:  Nucleic Acids Res       Date:  2010-07-21       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.