Literature DB >> 19801553

Generation of long RNA chains in water.

Giovanna Costanzo1, Samanta Pino, Fabiana Ciciriello, Ernesto Di Mauro.   

Abstract

The synthesis of RNA chains from 3',5'-cAMP and 3',5'-cGMP was observed. The RNA chains formed in water, at moderate temperatures (40-90 degrees C), in the absence of enzymes or inorganic catalysts. As determined by RNase analyses, the bonds formed were canonical 3',5'-phosphodiester bonds. The polymerizations are based on two reactions not previously described: 1) oligomerization of 3', 5'-cGMP to approximately 25-nucleotide-long RNA molecules, and of 3',5'-cAMP to 4- to 8-nucleotide-long molecules. Oligonucleotide A molecules were further extended by reciprocal terminal ligation to yield RNA molecules up to >120 nucleotides long and 2) chain extension by terminal ligation of newly polymerized products of 3',5'-cGMP on preformed oligonucleotides. The enzyme- and template-independent synthesis of long oligomers in water from prebiotically affordable precursors approaches the concept of spontaneous generation of (pre)genetic information.

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Year:  2009        PMID: 19801553      PMCID: PMC2785163          DOI: 10.1074/jbc.M109.041905

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  43 in total

1.  Polyphosphorylation and non-enzymatic template-directed ligation of oligonucleotides.

Authors:  K Gao; L E Orgel
Journal:  Orig Life Evol Biosph       Date:  2000-02       Impact factor: 1.950

2.  CYANAMIDE: A POSSIBLE KEY COMPOUND IN CHEMICAL EVOLUTION.

Authors:  G STEINMAN; R M LEMMON; M CALVIN
Journal:  Proc Natl Acad Sci U S A       Date:  1964-07       Impact factor: 11.205

3.  THE FORMATION OF CONDENSED PHOSPHATE IN AQUEOUS SOLUTION.

Authors:  A Beck; L E Orgel
Journal:  Proc Natl Acad Sci U S A       Date:  1965-09       Impact factor: 11.205

4.  Nonenzymatic ligation of short-chained 2'-5'- or 3'-5'-linked oligoribonucleotides on 2'-5'- or 3'-5'-linked complementary templates.

Authors:  Hiroaki Sawai; Makoto Wada; Tsukasa Kouda; Akiko Nakamura Ozaki
Journal:  Chembiochem       Date:  2006-04       Impact factor: 3.164

Review 5.  From formamide to RNA: the roles of formamide and water in the evolution of chemical information.

Authors:  Raffaele Saladino; Claudia Crestini; Fabiana Ciciriello; Samanta Pino; Giovanna Costanzo; Ernesto Di Mauro
Journal:  Res Microbiol       Date:  2009-06-25       Impact factor: 3.992

6.  Origin of informational polymers. Differential stability of 3'- and 5'-phosphoester bonds in deoxy monomers and oligomers.

Authors:  Raffaele Saladino; Claudia Crestini; Vincenzo Busiello; Fabiana Ciciriello; Giovanna Costanzo; Ernesto Di Mauro
Journal:  J Biol Chem       Date:  2005-07-21       Impact factor: 5.157

7.  Formation of nucleoside 5'-phosphoramidates under potentially prebiological conditions.

Authors:  R Lohrmann
Journal:  J Mol Evol       Date:  1977-11-25       Impact factor: 2.395

8.  Synthesis of activated pyrimidine ribonucleotides in prebiotically plausible conditions.

Authors:  Matthew W Powner; Béatrice Gerland; John D Sutherland
Journal:  Nature       Date:  2009-05-14       Impact factor: 49.962

Review 9.  Thermal perturbation differential spectra of ribonucleic acids. II. Nearest neighbour interactions.

Authors:  D Frechet; R Ehrlich; P Remy; J Gabarro-Arpa
Journal:  Nucleic Acids Res       Date:  1979-12-11       Impact factor: 16.971

Review 10.  Prebiotic chemistry and the origin of the RNA world.

Authors:  Leslie E Orgel
Journal:  Crit Rev Biochem Mol Biol       Date:  2004 Mar-Apr       Impact factor: 8.250

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  36 in total

Review 1.  Getting past the RNA world: the initial Darwinian ancestor.

Authors:  Michael Yarus
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-04-01       Impact factor: 10.005

Review 2.  Closing the circle: replicating RNA with RNA.

Authors:  Leslie K L Cheng; Peter J Unrau
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-06-16       Impact factor: 10.005

3.  Potential pitfalls in MALDI-TOF MS analysis of abiotically synthesized RNA oligonucleotides.

Authors:  Bradley T Burcar; Lauren M Cassidy; Elizabeth M Moriarty; Prakash C Joshi; Kristin M Coari; Linda B McGown
Journal:  Orig Life Evol Biosph       Date:  2013-06-22       Impact factor: 1.950

4.  Catalytic effects of Murchison material: prebiotic synthesis and degradation of RNA precursors.

Authors:  Raffaele Saladino; Claudia Crestini; Cristina Cossetti; Ernesto Di Mauro; David Deamer
Journal:  Orig Life Evol Biosph       Date:  2011-04-12       Impact factor: 1.950

Review 5.  Walking over 4 Gya: Chemical Evolution from Photochemistry to Mineral and Organic Chemistries Leading to an RNA World.

Authors:  Kunio Kawamura; Marie-Christine Maurel
Journal:  Orig Life Evol Biosph       Date:  2017-04-21       Impact factor: 1.950

6.  Evidence of liquid crystal-assisted abiotic ligation of nucleic acids.

Authors:  Tommaso P Fraccia; Giuliano Zanchetta; Valeria Rimoldi; Noel A Clark; Tommaso Bellini
Journal:  Orig Life Evol Biosph       Date:  2015-05-15       Impact factor: 1.950

7.  The importance of stochastic transitions for the origin of life.

Authors:  Paul G Higgs; Meng Wu
Journal:  Orig Life Evol Biosph       Date:  2012-10-25       Impact factor: 1.950

8.  May cyclic nucleotides be a source for abiotic RNA synthesis?

Authors:  Giovanna Costanzo; Samanta Pino; Giorgia Botta; Raffaele Saladino; Ernesto Di Mauro
Journal:  Orig Life Evol Biosph       Date:  2011-12-03       Impact factor: 1.950

9.  Nucleotide Selectivity in Abiotic RNA Polymerization Reactions.

Authors:  Kristin M Coari; Rebecca C Martin; Kopal Jain; Linda B McGown
Journal:  Orig Life Evol Biosph       Date:  2017-02-03       Impact factor: 1.950

Review 10.  Four Ways to Oligonucleotides Without Phosphoimidazolides.

Authors:  Judit E Šponer; Jiří Šponer; Ernesto Di Mauro
Journal:  J Mol Evol       Date:  2015-10-31       Impact factor: 2.395

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