Literature DB >> 19232353

Solid-state NMR evidence for inequivalent GvpA subunits in gas vesicles.

Astrid C Sivertsen1, Marvin J Bayro, Marina Belenky, Robert G Griffin, Judith Herzfeld.   

Abstract

Gas vesicles are organelles that provide buoyancy to the aquatic microorganisms that harbor them. The gas vesicle shell consists almost exclusively of the hydrophobic 70-residue gas vesicle protein A, arranged in an ordered array. Solid-state NMR spectra of intact collapsed gas vesicles from the cyanobacterium Anabaena flos-aquae show duplication of certain gas vesicle protein A resonances, indicating that specific sites experience at least two different local environments. Interpretation of these results in terms of an asymmetric dimer repeat unit can reconcile otherwise conflicting features of the primary, secondary, tertiary, and quaternary structures of the gas vesicle protein. In particular, the asymmetric dimer can explain how the hydrogen bonds in the beta-sheet portion of the molecule can be oriented optimally for strength while promoting stabilizing aromatic and electrostatic side-chain interactions among highly conserved residues and creating a large hydrophobic surface suitable for preventing water condensation inside the vesicle.

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Year:  2009        PMID: 19232353      PMCID: PMC2992792          DOI: 10.1016/j.jmb.2009.02.015

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  28 in total

1.  The PSIPRED protein structure prediction server.

Authors:  L J McGuffin; K Bryson; D T Jones
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2.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

3.  Correlation of structural elements and infectivity of the HET-s prion.

Authors:  Christiane Ritter; Marie-Lise Maddelein; Ansgar B Siemer; Thorsten Lührs; Matthias Ernst; Beat H Meier; Sven J Saupe; Roland Riek
Journal:  Nature       Date:  2005-06-09       Impact factor: 49.962

4.  Solid state NMR sequential resonance assignments and conformational analysis of the 2x10.4 kDa dimeric form of the Bacillus subtilis protein Crh.

Authors:  Anja Böckmann; Adam Lange; Anne Galinier; Sorin Luca; Nicolas Giraud; Michel Juy; Henrike Heise; Roland Montserret; François Penin; Marc Baldus
Journal:  J Biomol NMR       Date:  2003-12       Impact factor: 2.835

5.  Temperature-dependent sensitivity enhancement of solid-state NMR spectra of alpha-synuclein fibrils.

Authors:  Kathryn D Kloepper; Donghua H Zhou; Ying Li; Kem A Winter; Julia M George; Chad M Rienstra
Journal:  J Biomol NMR       Date:  2007-11       Impact factor: 2.835

6.  Blue-Green Algae: Fine Structure of the Gas Vacuoles.

Authors:  C C Bowen; T E Jensen
Journal:  Science       Date:  1965-03-19       Impact factor: 47.728

7.  1H, 13C and 15N chemical shift referencing in biomolecular NMR.

Authors:  D S Wishart; C G Bigam; J Yao; F Abildgaard; H J Dyson; E Oldfield; J L Markley; B D Sykes
Journal:  J Biomol NMR       Date:  1995-09       Impact factor: 2.835

8.  Structural characteristics of halobacterial gas vesicles.

Authors:  S Offner; U Ziese; G Wanner; D Typke; F Pfeifer
Journal:  Microbiology       Date:  1998-05       Impact factor: 2.777

9.  Chemical shift referencing in MAS solid state NMR.

Authors:  Corey R Morcombe; Kurt W Zilm
Journal:  J Magn Reson       Date:  2003-06       Impact factor: 2.229

10.  Gas vesicles are strengthened by the outer-surface protein, GvpC.

Authors:  P K Hayes; B Buchholz; A E Walsby
Journal:  Arch Microbiol       Date:  1992       Impact factor: 2.552

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  11 in total

1.  An amyloid organelle, solid-state NMR evidence for cross-β assembly of gas vesicles.

Authors:  Marvin J Bayro; Eugenio Daviso; Marina Belenky; Robert G Griffin; Judith Herzfeld
Journal:  J Biol Chem       Date:  2011-12-06       Impact factor: 5.157

2.  Cellular solid-state nuclear magnetic resonance spectroscopy.

Authors:  Marie Renault; Ria Tommassen-van Boxtel; Martine P Bos; Jan Andries Post; Jan Tommassen; Marc Baldus
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-13       Impact factor: 11.205

3.  Solid-state NMR characterization of gas vesicle structure.

Authors:  Astrid C Sivertsen; Marvin J Bayro; Marina Belenky; Robert G Griffin; Judith Herzfeld
Journal:  Biophys J       Date:  2010-09-22       Impact factor: 4.033

Review 4.  Helical membrane protein conformations and their environment.

Authors:  Timothy A Cross; Dylan T Murray; Anthony Watts
Journal:  Eur Biophys J       Date:  2013-09-01       Impact factor: 1.733

Review 5.  Distribution, formation and regulation of gas vesicles.

Authors:  Felicitas Pfeifer
Journal:  Nat Rev Microbiol       Date:  2012-09-03       Impact factor: 60.633

6.  M2 proton channel structural validation from full-length protein samples in synthetic bilayers and E. coli membranes.

Authors:  Yimin Miao; Huajun Qin; Riqiang Fu; Mukesh Sharma; Thach V Can; Ivan Hung; Sorin Luca; Peter L Gor'kov; William W Brey; Timothy A Cross
Journal:  Angew Chem Int Ed Engl       Date:  2012-07-13       Impact factor: 15.336

7.  Solid state NMR: The essential technology for helical membrane protein structural characterization.

Authors:  Timothy A Cross; Vindana Ekanayake; Joana Paulino; Anna Wright
Journal:  J Magn Reson       Date:  2013-12-19       Impact factor: 2.229

8.  High-resolution MAS NMR analysis of PI3-SH3 amyloid fibrils: backbone conformation and implications for protofilament assembly and structure .

Authors:  Marvin J Bayro; Thorsten Maly; Neil R Birkett; Cait E Macphee; Christopher M Dobson; Robert G Griffin
Journal:  Biochemistry       Date:  2010-09-07       Impact factor: 3.162

9.  Efficient resonance assignment of proteins in MAS NMR by simultaneous intra- and inter-residue 3D correlation spectroscopy.

Authors:  Eugenio Daviso; Matthew T Eddy; Loren B Andreas; Robert G Griffin; Judith Herzfeld
Journal:  J Biomol NMR       Date:  2013-01-19       Impact factor: 2.835

10.  Gas vesicles across kingdoms: a comparative solid-state nuclear magnetic resonance study.

Authors:  Eugenio Daviso; Marina Belenky; Robert G Griffin; Judith Herzfeld
Journal:  J Mol Microbiol Biotechnol       Date:  2013-08-05
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