Literature DB >> 18997323

Phoenito experiments: combining the strengths of commercial crystallization automation.

Janet Newman1, Tam M Pham, Thomas S Peat.   

Abstract

The use of crystallization robots for initial screening in macromolecular crystallization is well established. This paper describes how four general optimization techniques, growth-rate modulation, fine screening, seeding and additive screening, have been adapted for automation in a medium-throughput crystallization service facility. The use of automation for more challenging optimization experiments is discussed, as is a novel way of using both the Mosquito and the Phoenix nano-dispensing robots during the setup of a single crystallization plate. This dual-dispenser technique plays to the strengths of both machines.

Mesh:

Substances:

Year:  2008        PMID: 18997323      PMCID: PMC2581684          DOI: 10.1107/S1744309108029667

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  17 in total

1.  A method to produce microseed stock for use in the crystallization of biological macromolecules.

Authors:  J R Luft; G T DeTitta
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-05

2.  Screening and optimization strategies for macromolecular crystal growth.

Authors:  R Cudney; S Patel; K Weisgraber; Y Newhouse; A McPherson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-07-01

3.  Expanding screening space through the use of alternative reservoirs in vapor-diffusion experiments.

Authors:  Janet Newman
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-03-24

4.  Towards rationalization of crystallization screening for small- to medium-sized academic laboratories: the PACT/JCSG+ strategy.

Authors:  Janet Newman; David Egan; Thomas S Walter; Ran Meged; Ian Berry; Marouane Ben Jelloul; Joel L Sussman; David I Stuart; Anastassis Perrakis
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-09-28

5.  High-throughput crystal-optimization strategies in the South Paris Yeast Structural Genomics Project: one size fits all?

Authors:  Nicolas Leulliot; Lionel Trésaugues; Michael Bremang; Isabelle Sorel; Nathalie Ulryck; Marc Graille; Ilham Aboulfath; Anne Poupon; Dominique Liger; Sophie Quevillon-Cheruel; Joël Janin; Herman van Tilbeurgh
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-05-26

6.  Screening and optimization methods for nonautomated crystallization laboratories.

Authors:  Terese Bergfors
Journal:  Methods Mol Biol       Date:  2007

7.  Efficient optimization of crystallization conditions by manipulation of drop volume ratio and temperature.

Authors:  Joseph R Luft; Jennifer R Wolfley; Meriem I Said; Raymond M Nagel; Angela M Lauricella; Jennifer L Smith; Max H Thayer; Christina K Veatch; Edward H Snell; Michael G Malkowski; George T Detitta
Journal:  Protein Sci       Date:  2007-02-27       Impact factor: 6.725

8.  Initial evaluations of the reproducibility of vapor-diffusion crystallization.

Authors:  Janet Newman; Jian Xu; Michael C Willis
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-06-15

9.  An automated microseed matrix-screening method for protein crystallization.

Authors:  Allan D'Arcy; Frederic Villard; May Marsh
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-03-16

10.  Improved success of sparse matrix protein crystallization screening with heterogeneous nucleating agents.

Authors:  Anil S Thakur; Gautier Robin; Gregor Guncar; Neil F W Saunders; Janet Newman; Jennifer L Martin; Bostjan Kobe
Journal:  PLoS One       Date:  2007-10-31       Impact factor: 3.240

View more
  18 in total

1.  Biocrystallography: past, present, future.

Authors:  Richard Giegé; Claude Sauter
Journal:  HFSP J       Date:  2010-04-22

2.  Lessons from high-throughput protein crystallization screening: 10 years of practical experience.

Authors:  Joseph R Luft; Edward H Snell; George T Detitta
Journal:  Expert Opin Drug Discov       Date:  2011-03-22       Impact factor: 6.098

3.  Cloning, expression, purification and crystallization of dihydrodipicolinate synthase from the psychrophile Shewanella benthica.

Authors:  Jacinta M Wubben; Con Dogovski; Renwick C J Dobson; Rachel Codd; Juliet A Gerrard; Michael W Parker; Matthew A Perugini
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-10-29

4.  Purification, crystallization, small-angle X-ray scattering and preliminary X-ray diffraction analysis of the SH2 domain of the Csk-homologous kinase.

Authors:  Natalie J Gunn; Michael A Gorman; Renwick C J Dobson; Michael W Parker; Terrence D Mulhern
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-02-23

5.  Evaluating the efficacy of tryptophan fluorescence and absorbance as a selection tool for identifying protein crystals.

Authors:  Harindarpal S Gill
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-02-27

6.  Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of N-acetylmannosamine-6-phosphate 2-epimerase from methicillin-resistant Staphylococcus aureus.

Authors:  Rachel A North; Sarah A Kessans; Michael D W Griffin; Andrew J A Watson; Antony J Fairbanks; Renwick C J Dobson
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-04-17       Impact factor: 1.056

7.  The purification, crystallization and preliminary X-ray diffraction analysis of two isoforms of meso-diaminopimelate decarboxylase from Arabidopsis thaliana.

Authors:  Michael R Oliver; Jennifer M Crowther; Mary M Leeman; Sarah A Kessans; Rachel A North; Katherine A Donovan; Michael D W Griffin; Hironori Suzuki; André O Hudson; Müge Kasanmascheff; Renwick C J Dobson
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-04-25       Impact factor: 1.056

8.  Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of N-acetylmannosamine kinase from methicillin-resistant Staphylococcus aureus.

Authors:  Rachel A North; Simona Seizova; Anja Stampfli; Sarah A Kessans; Hironori Suzuki; Michael D W Griffin; Marc Kvansakul; Renwick C J Dobson
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-04-17       Impact factor: 1.056

9.  Crystallization and preliminary X-ray diffraction analysis of diaminopimelate epimerase from Escherichia coli.

Authors:  Lilian Hor; Renwick C J Dobson; Con Dogovski; Craig A Hutton; Matthew A Perugini
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-12-25

10.  Crystallisation of wild-type and variant forms of a recombinant plant enzyme β-D-glucan glucohydrolase from barley (Hordeum vulgare L.) and preliminary X-ray analysis.

Authors:  Sukanya Luang; James R Ketudat Cairns; Victor A Streltsov; Maria Hrmova
Journal:  Int J Mol Sci       Date:  2010-07-19       Impact factor: 5.923

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.