Literature DB >> 24817730

Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of N-acetylmannosamine-6-phosphate 2-epimerase from methicillin-resistant Staphylococcus aureus.

Rachel A North1, Sarah A Kessans1, Michael D W Griffin2, Andrew J A Watson3, Antony J Fairbanks3, Renwick C J Dobson1.   

Abstract

Sialic acids are one of the most important carbohydrate classes in biology. Some bacterial pathogens can scavenge sialic acids from their surrounding environment and degrade them as a source of carbon, nitrogen and energy. This sequestration and subsequent catabolism of sialic acid require a cluster of genes known as the `Nan-Nag' cluster. The enzymes coded by these genes are important for pathogen colonization and persistence. Importantly, the Nan-Nag genes have proven to be essential for Staphylococcus aureus growth on sialic acids, suggesting that the pathway is a viable antibiotic drug target. The enzyme N-acetylmannosamine-6-phosphate 2-epimerase is involved in the catabolism of sialic acid; specifically, the enzyme converts N-acetylmannosamine-6-phosphate into N-acetylglucosamine-6-phosphate. The gene was cloned into an appropriate expression vector, and recombinant protein was expressed in Escherichia coli BL21 (DE3) cells and purified via a three-step procedure. Purified N-acetylmannosamine-6-phosphate 2-epimerase was screened for crystallization. The best crystal diffracted to a resolution of beyond 1.84 Å in space group P21212. Understanding the structural nature of this enzyme from methicillin-resistant S. aureus will provide us with the insights necessary for the development of future antibiotics.

Entities:  

Keywords:  MRSA; N-acetylmannosamine-6-phosphate 2-epimerase; NanE; Staphylococcus aureus; sialic acid catabolism

Mesh:

Substances:

Year:  2014        PMID: 24817730      PMCID: PMC4014339          DOI: 10.1107/S2053230X14007171

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  27 in total

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3.  Solvent content of protein crystals.

Authors:  B W Matthews
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Review 7.  Diversity of microbial sialic acid metabolism.

Authors:  Eric R Vimr; Kathryn A Kalivoda; Eric L Deszo; Susan M Steenbergen
Journal:  Microbiol Mol Biol Rev       Date:  2004-03       Impact factor: 11.056

8.  Sialic acid catabolism in Staphylococcus aureus.

Authors:  Michael E Olson; Jessica M King; Timothy L Yahr; Alexander R Horswill
Journal:  J Bacteriol       Date:  2013-02-08       Impact factor: 3.490

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

10.  Phaser crystallographic software.

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  4 in total

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Authors:  Rachel A North; Christopher R Horne; James S Davies; Daniela M Remus; Andrew C Muscroft-Taylor; Parveen Goyal; Weixiao Yuan Wahlgren; S Ramaswamy; Rosmarie Friemann; Renwick C J Dobson
Journal:  Biophys Rev       Date:  2017-12-08

2.  The basis for non-canonical ROK family function in the N-acetylmannosamine kinase from the pathogen Staphylococcus aureus.

Authors:  David Coombes; James S Davies; Michael C Newton-Vesty; Christopher R Horne; Thanuja G Setty; Ramaswamy Subramanian; James W B Moir; Rosmarie Friemann; Santosh Panjikar; Michael D W Griffin; Rachel A North; Renwick C J Dobson
Journal:  J Biol Chem       Date:  2020-01-15       Impact factor: 5.157

3.  Crystal structures and kinetic analyses of N-acetylmannosamine-6-phosphate 2-epimerases from Fusobacterium nucleatum and Vibrio cholerae.

Authors:  Lavanyaa Manjunath; Sai Rohit Guntupalli; Michael J Currie; Rachel A North; Renwick C J Dobson; Vinod Nayak; Ramaswamy Subramanian
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2018-06-28       Impact factor: 1.056

4.  The Sodium Sialic Acid Symporter From Staphylococcus aureus Has Altered Substrate Specificity.

Authors:  Rachel A North; Weixiao Y Wahlgren; Daniela M Remus; Mariafrancesca Scalise; Sarah A Kessans; Elin Dunevall; Elin Claesson; Tatiana P Soares da Costa; Matthew A Perugini; S Ramaswamy; Jane R Allison; Cesare Indiveri; Rosmarie Friemann; Renwick C J Dobson
Journal:  Front Chem       Date:  2018-07-04       Impact factor: 5.221

  4 in total

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