Literature DB >> 21119764

Biocrystallography: past, present, future.

Richard Giegé1, Claude Sauter.   

Abstract

The evolution of biocrystallography from the pioneers' time to the present era of global biology is presented in relation to the development of methodological and instrumental advances for molecular sample preparation and structure elucidation over the last 6 decades. The interdisciplinarity of the field that generated cross-fertilization between physics- and biology-focused themes is emphasized. In particular, strategies to circumvent the main bottlenecks of biocrystallography are discussed. They concern (i) the way macromolecular targets are selected, designed, and characterized, (ii) crystallogenesis and how to deal with physical and biological parameters that impact crystallization for growing and optimizing crystals, and (iii) the methods for crystal analysis and 3D structure determination. Milestones that have marked the history of biocrystallography illustrate the discussion. Finally, the future of the field is envisaged. Wide gaps of the structural space need to be filed and membrane proteins as well as intrinsically unstructured proteins still constitute challenging targets. Solving supramolecular assemblies of increasing complexity, developing a "4D biology" for decrypting the kinematic changes in macromolecular structures in action, integrating these structural data in the whole cell organization, and deciphering biomedical implications will represent the new frontiers.

Year:  2010        PMID: 21119764      PMCID: PMC2929629          DOI: 10.2976/1.3369281

Source DB:  PubMed          Journal:  HFSP J        ISSN: 1955-205X


  109 in total

Review 1.  Structural proteomics: prospects for high throughput sample preparation.

Authors:  D Christendat; A Yee; A Dharamsi; Y Kluger; M Gerstein; C H Arrowsmith; A M Edwards
Journal:  Prog Biophys Mol Biol       Date:  2000       Impact factor: 3.667

Review 2.  Overview and new developments in softer X-ray (2A < lambda < 5A) protein crystallography.

Authors:  John R Helliwell
Journal:  J Synchrotron Radiat       Date:  2003-11-28       Impact factor: 2.616

3.  Molecular structure of nucleic acids; a structure for deoxyribose nucleic acid.

Authors:  J D WATSON; F H CRICK
Journal:  Nature       Date:  1953-04-25       Impact factor: 49.962

4.  Automated analysis of vapor diffusion crystallization drops with an X-ray beam.

Authors:  Lilian Jacquamet; Jeremy Ohana; Jacques Joly; Franck Borel; Michel Pirocchi; Philippe Charrault; Alain Bertoni; Pascale Israel-Gouy; Philippe Carpentier; Frank Kozielski; Delphine Blot; Jean-Luc Ferrer
Journal:  Structure       Date:  2004-07       Impact factor: 5.006

5.  Structural basis of anticodon loop recognition by glutaminyl-tRNA synthetase.

Authors:  M A Rould; J J Perona; T A Steitz
Journal:  Nature       Date:  1991-07-18       Impact factor: 49.962

Review 6.  Biophysical techniques for ligand screening and drug design.

Authors:  Jean-Paul Renaud; Marc-André Delsuc
Journal:  Curr Opin Pharmacol       Date:  2009-07-04       Impact factor: 5.547

7.  Diagnostic of precipitant for biomacromolecule crystallization by quasi-elastic light-scattering.

Authors:  V Mikol; E Hirsch; R Giegé
Journal:  J Mol Biol       Date:  1990-05-05       Impact factor: 5.469

Review 8.  Single-particle reconstruction of biological macromolecules in electron microscopy--30 years.

Authors:  Joachim Frank
Journal:  Q Rev Biophys       Date:  2009-08       Impact factor: 5.318

Review 9.  Engineering of recombinant crystallization chaperones.

Authors:  Shohei Koide
Journal:  Curr Opin Struct Biol       Date:  2009-05-26       Impact factor: 6.809

Review 10.  Lessons from structural genomics.

Authors:  Thomas C Terwilliger; David Stuart; Shigeyuki Yokoyama
Journal:  Annu Rev Biophys       Date:  2009       Impact factor: 12.981

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  3 in total

1.  High-throughput in situ X-ray screening of and data collection from protein crystals at room temperature and under cryogenic conditions.

Authors:  Jana Broecker; Takefumi Morizumi; Wei-Lin Ou; Viviane Klingel; Anling Kuo; David J Kissick; Andrii Ishchenko; Ming-Yue Lee; Shenglan Xu; Oleg Makarov; Vadim Cherezov; Craig M Ogata; Oliver P Ernst
Journal:  Nat Protoc       Date:  2018-01-04       Impact factor: 13.491

2.  Purification, characterization and crystallization of the human 80S ribosome.

Authors:  Heena Khatter; Alexander G Myasnikov; Leslie Mastio; Isabelle M L Billas; Catherine Birck; Stefano Stella; Bruno P Klaholz
Journal:  Nucleic Acids Res       Date:  2014-01-21       Impact factor: 16.971

3.  A Versatile System for High-Throughput In Situ X-ray Screening and Data Collection of Soluble and Membrane-Protein Crystals.

Authors:  Jana Broecker; Viviane Klingel; Wei-Lin Ou; Aidin R Balo; David J Kissick; Craig M Ogata; Anling Kuo; Oliver P Ernst
Journal:  Cryst Growth Des       Date:  2016-10-03       Impact factor: 4.076

  3 in total

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