Literature DB >> 17272840

Screening and optimization methods for nonautomated crystallization laboratories.

Terese Bergfors1.   

Abstract

Crystallization of biological macromolecules is becoming increasingly automated. However, for various reasons, many laboratories still perform at least some aspects of the work manually. A typical crystallization project entails two distinct steps: screening and optimization. The aim of the initial phase is to screen the many parameters affecting crystallization, and as broadly as possible. If any promising conditions are found, these are optimized with other protocols. This chapter describes procedures for manual screening by the vapor diffusion and microbatch methods in 96- and 24-well plate formats. For optimization, several protocols are presented, including grid and additive screens, seeding, and manipulation of the drop kinetics. The scoring of crystallization results and methods for distinguishing protein and salt crystals are also discussed in this chapter.

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Year:  2007        PMID: 17272840     DOI: 10.1007/978-1-59745-209-0_7

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  8 in total

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Authors:  Kannan Raghunathan; Paul T Harris; Dennis N Arvidson
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-04-29

2.  Determining structures of RNA aptamers and riboswitches by X-ray crystallography.

Authors:  Andrea L Edwards; Andrew D Garst; Robert T Batey
Journal:  Methods Mol Biol       Date:  2009

3.  Phoenito experiments: combining the strengths of commercial crystallization automation.

Authors:  Janet Newman; Tam M Pham; Thomas S Peat
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-10-31

4.  Improving the success rate of protein crystallization by random microseed matrix screening.

Authors:  Marisa Till; Alice Robson; Matthew J Byrne; Asha V Nair; Stefan A Kolek; Patrick D Shaw Stewart; Paul R Race
Journal:  J Vis Exp       Date:  2013-08-31       Impact factor: 1.355

5.  Large-volume protein crystal growth for neutron macromolecular crystallography.

Authors:  Joseph D Ng; James K Baird; Leighton Coates; Juan M Garcia-Ruiz; Teresa A Hodge; Sijay Huang
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-03-30       Impact factor: 1.056

6.  PKS-NRPS Enzymology and Structural Biology: Considerations in Protein Production.

Authors:  Meredith A Skiba; Finn P Maloney; Qingyun Dan; Amy E Fraley; Courtney C Aldrich; Janet L Smith; W Clay Brown
Journal:  Methods Enzymol       Date:  2018-03-16       Impact factor: 1.600

7.  Pi sampling: a methodical and flexible approach to initial macromolecular crystallization screening.

Authors:  Fabrice Gorrec; Colin M Palmer; Guillaume Lebon; Tony Warne
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-04-07

8.  Accelerated cryo-EM-guided determination of three-dimensional RNA-only structures.

Authors:  Kalli Kappel; Kaiming Zhang; Zhaoming Su; Andrew M Watkins; Wipapat Kladwang; Shanshan Li; Grigore Pintilie; Ved V Topkar; Ramya Rangan; Ivan N Zheludev; Joseph D Yesselman; Wah Chiu; Rhiju Das
Journal:  Nat Methods       Date:  2020-07-02       Impact factor: 28.547

  8 in total

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