Literature DB >> 18979781

Particle-based shape analysis of multi-object complexes.

Joshua Cates1, P Thomas Fletcher, Martin Styner, Heather Cody Hazlett, Ross Whitaker.   

Abstract

This paper presents a new method for optimizing surface point correspondences for shape modeling of multiobject anatomy, or shape complexes. The proposed method is novel in that it optimizes correspondence positions in the full, joint shape space of the object complex. Researchers have previously only considered the correspondence problem separately for each structure, thus ignoring the interstructural shape correlations that are increasingly of interest in many clinical contexts, such as the study of the effects of disease on groups of neuroanatomical structures. The proposed method uses a nonparametric, dynamic particle system to simultaneously sample object surfaces and optimize correspondence point positions. This paper also suggests a principled approach to hypothesis testing using the Hotelling T2 test in the PCA space of the correspondence model, with a simulation-based choice of the number of PCA modes. We also consider statistical analysis of object poses. The modeling and analysis methods are illustrated on brain structure complexes from an ongoing clinical study of pediatric autism.

Entities:  

Mesh:

Year:  2008        PMID: 18979781      PMCID: PMC2753605          DOI: 10.1007/978-3-540-85988-8_57

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  7 in total

1.  Automatic construction of eigenshape models by direct optimization.

Authors:  A C Kotcheff; C J Taylor
Journal:  Med Image Anal       Date:  1998-12       Impact factor: 8.545

2.  Principal geodesic analysis for the study of nonlinear statistics of shape.

Authors:  P Thomas Fletcher; Conglin Lu; Stephen M Pizer; Sarang Joshi
Journal:  IEEE Trans Med Imaging       Date:  2004-08       Impact factor: 10.048

3.  Framework for the Statistical Shape Analysis of Brain Structures using SPHARM-PDM.

Authors:  Martin Styner; Ipek Oguz; Shun Xu; Christian Brechbühler; Dimitrios Pantazis; James J Levitt; Martha E Shenton; Guido Gerig
Journal:  Insight J       Date:  2006

4.  Shape modeling and analysis with entropy-based particle systems.

Authors:  Joshua Cates; P Thomas Fletcher; Martin Styner; Martha Shenton; Ross Whitaker
Journal:  Inf Process Med Imaging       Date:  2007

5.  Magnetic resonance imaging and head circumference study of brain size in autism: birth through age 2 years.

Authors:  Heather Cody Hazlett; Michele Poe; Guido Gerig; Rachel Gimpel Smith; James Provenzale; Allison Ross; John Gilmore; Joseph Piven
Journal:  Arch Gen Psychiatry       Date:  2005-12

6.  Boundary and medial shape analysis of the hippocampus in schizophrenia.

Authors:  Martin Styner; Jeffrey A Lieberman; Dimitrios Pantazis; Guido Gerig
Journal:  Med Image Anal       Date:  2004-09       Impact factor: 8.545

7.  Axial homeosis and appendicular skeleton defects in mice with a targeted disruption of hoxd-11.

Authors:  A P Davis; M R Capecchi
Journal:  Development       Date:  1994-08       Impact factor: 6.868

  7 in total
  17 in total

1.  Lung and airway shape in neuroendocrine cell hyperplasia of infancy.

Authors:  Emily J Mastej; Emily M DeBoer; Stephen M Humphries; Marlijne C Cook; Kendall S Hunter; Deborah R Liptzin; Jason P Weinman; Robin R Deterding
Journal:  Pediatr Radiol       Date:  2018-06-28

2.  Shape analysis based on depth-ordering.

Authors:  Yi Hong; Yi Gao; Marc Niethammer; Sylvain Bouix
Journal:  Med Image Anal       Date:  2015-04-16       Impact factor: 8.545

3.  General multivariate linear modeling of surface shapes using SurfStat.

Authors:  Moo K Chung; Keith J Worsley; Brendon M Nacewicz; Kim M Dalton; Richard J Davidson
Journal:  Neuroimage       Date:  2010-07-08       Impact factor: 6.556

4.  Shape analysis, a field in need of careful validation.

Authors:  Yi Gao; Tammy Riklin-Raviv; Sylvain Bouix
Journal:  Hum Brain Mapp       Date:  2014-04-19       Impact factor: 5.038

5.  Deformable multisurface segmentation of the spine for orthopedic surgery planning and simulation.

Authors:  Rabia Haq; Jérôme Schmid; Roderick Borgie; Joshua Cates; Michel A Audette
Journal:  J Med Imaging (Bellingham)       Date:  2020-02-22

6.  Statistical shape analysis using 3D Poisson equation--A quantitatively validated approach.

Authors:  Yi Gao; Sylvain Bouix
Journal:  Med Image Anal       Date:  2016-01-15       Impact factor: 8.545

7.  Hierarchical bayesian modeling, estimation, and sampling for multigroup shape analysis.

Authors:  Yen-Yun Yu; P Thomas Fletcher; Suyash P Awate
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

8.  Articular surface segmentation using active shape models for intraoperative implant assessment.

Authors:  Joseph Görres; Michael Brehler; Jochen Franke; Sven Y Vetter; Paul A Grützner; Hans-Peter Meinzer; Ivo Wolf
Journal:  Int J Comput Assist Radiol Surg       Date:  2016-04-19       Impact factor: 2.924

Review 9.  Entropy-based particle correspondence for shape populations.

Authors:  Ipek Oguz; Josh Cates; Manasi Datar; Beatriz Paniagua; Thomas Fletcher; Clement Vachet; Martin Styner; Ross Whitaker
Journal:  Int J Comput Assist Radiol Surg       Date:  2015-12-08       Impact factor: 2.924

10.  Interpolation of Longitudinal Shape and Image Data via Optimal Mass Transport.

Authors:  Yi Gao; Liang-Jia Zhu; Sylvain Bouix; Allen Tannenbaum
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2014-03-21
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