Literature DB >> 26874288

Statistical shape analysis using 3D Poisson equation--A quantitatively validated approach.

Yi Gao1, Sylvain Bouix2.   

Abstract

Statistical shape analysis has been an important area of research with applications in biology, anatomy, neuroscience, agriculture, paleontology, etc. Unfortunately, the proposed methods are rarely quantitatively evaluated, and as shown in recent studies, when they are evaluated, significant discrepancies exist in their outputs. In this work, we concentrate on the problem of finding the consistent location of deformation between two population of shapes. We propose a new shape analysis algorithm along with a framework to perform a quantitative evaluation of its performance. Specifically, the algorithm constructs a Signed Poisson Map (SPoM) by solving two Poisson equations on the volumetric shapes of arbitrary topology, and statistical analysis is then carried out on the SPoMs. The method is quantitatively evaluated on synthetic shapes and applied on real shape data sets in brain structures.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Poisson equation; Quantitative evaluation; Reproducibility; Statistical shape analysis

Mesh:

Year:  2016        PMID: 26874288      PMCID: PMC4789126          DOI: 10.1016/j.media.2015.12.007

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  28 in total

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Journal:  Med Image Anal       Date:  2005-06       Impact factor: 8.545

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Authors:  Paul A Yushkevich; Hui Zhang; James C Gee
Journal:  IEEE Trans Med Imaging       Date:  2006-12       Impact factor: 10.048

3.  Multiscale 3D shape analysis using spherical wavelets.

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Journal:  Inf Process Med Imaging       Date:  2005

5.  Shape analysis using a point-based statistical shape model built on correspondence probabilities.

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6.  Inferring brain variability from diffeomorphic deformations of currents: an integrative approach.

Authors:  Stanley Durrleman; Xavier Pennec; Alain Trouvé; Paul Thompson; Nicholas Ayache
Journal:  Med Image Anal       Date:  2008-06-21       Impact factor: 8.545

7.  Tensor-based cortical surface morphometry via weighted spherical harmonic representation.

Authors:  Moo K Chung; Kim M Dalton; Richard J Davidson
Journal:  IEEE Trans Med Imaging       Date:  2008-08       Impact factor: 10.048

8.  Particle-based shape analysis of multi-object complexes.

Authors:  Joshua Cates; P Thomas Fletcher; Martin Styner; Heather Cody Hazlett; Ross Whitaker
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

9.  Shape analysis, a field in need of careful validation.

Authors:  Yi Gao; Tammy Riklin-Raviv; Sylvain Bouix
Journal:  Hum Brain Mapp       Date:  2014-04-19       Impact factor: 5.038

10.  Sparse Shape Representation using the Laplace-Beltrami Eigenfunctions and Its Application to Modeling Subcortical Structures.

Authors:  Seung-Goo Kim; Moo K Chung; Stacey M Schaefer; Carien van Reekum; Richard J Davidson
Journal:  Proc Workshop Math Methods Biomed Image Analysis       Date:  2012
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  2 in total

1.  The bumps under the hippocampus.

Authors:  Cheng Chang; Chuan Huang; Naiyun Zhou; Shawn Xiang Li; Lawrence Ver Hoef; Yi Gao
Journal:  Hum Brain Mapp       Date:  2017-10-23       Impact factor: 5.038

2.  Automatic construction of statistical shape models using deformable simplex meshes with vector field convolution energy.

Authors:  Jinke Wang; Changfa Shi
Journal:  Biomed Eng Online       Date:  2017-04-24       Impact factor: 2.819

  2 in total

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