Literature DB >> 10072198

Automatic construction of eigenshape models by direct optimization.

A C Kotcheff1, C J Taylor.   

Abstract

A new approach to the problem of automatic construction of eigenshape models is presented. Eigenshape models have proved to be successful in a variety of medical image analysis problems. However, automatic construction of eigenshape models has proved to be a difficult problem, and in many applications the models are built by hand-a painstaking process. We show that the fundamental problem is a choice of the correct pose and parametrization of each shape in the training set. Eigenshape models are not invariant under reparametrizations and pose transformations of the training shapes. Since there is no a priori correct choice for the pose and parametrization of each shape, their value should be chosen so as to produce a model that is compact and specific. This problem can be solved by finding an objective function that measures these properties and varying the pose and parametrization of each shape to optimize this function. We show that the appropriate objective function is the determinant of the covariance matrix. We go on to show how this objective function can be optimized by a genetic algorithm (GA) and thus give a practical method for building eigenshape models. The models produced are often better than hand-built ones. The advantages of a GA over other choices of optimization method are that no assumptions about the nature of the shapes being modelled is required and that the global minimum of the objective function can, in principle, be found.

Mesh:

Year:  1998        PMID: 10072198     DOI: 10.1016/s1361-8415(98)80012-1

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  10 in total

1.  Knowledge-based interpolation of curves: application to femoropopliteal arterial centerline restoration.

Authors:  Tejas Rakshe; Dominik Fleischmann; Jarrett Rosenberg; Justus E Roos; Sandy Napel
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2.  Shape modeling and analysis with entropy-based particle systems.

Authors:  Joshua Cates; P Thomas Fletcher; Martin Styner; Martha Shenton; Ross Whitaker
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3.  Particle-based shape analysis of multi-object complexes.

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4.  Cortical correspondence with probabilistic fiber connectivity.

Authors:  Ipek Oguz; Marc Niethammer; Josh Cates; Ross Whitaker; Thomas Fletcher; Clement Vachet; Martin Styner
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5.  Skeletal Shape Correspondence Through Entropy.

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Journal:  IEEE Trans Med Imaging       Date:  2017-09-21       Impact factor: 10.048

6.  Hierarchical bayesian modeling, estimation, and sampling for multigroup shape analysis.

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Journal:  Med Image Comput Comput Assist Interv       Date:  2014

Review 7.  Entropy-based particle correspondence for shape populations.

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8.  Robust estimation of group-wise cortical correspondence with an application to macaque and human neuroimaging studies.

Authors:  Ilwoo Lyu; Sun H Kim; Joon-Kyung Seong; Sang W Yoo; Alan Evans; Yundi Shi; Mar Sanchez; Marc Niethammer; Martin A Styner
Journal:  Front Neurosci       Date:  2015-06-11       Impact factor: 4.677

9.  Heritability maps of human face morphology through large-scale automated three-dimensional phenotyping.

Authors:  Dimosthenis Tsagkrasoulis; Pirro Hysi; Tim Spector; Giovanni Montana
Journal:  Sci Rep       Date:  2017-04-19       Impact factor: 4.379

Review 10.  Statistical shape and appearance models in osteoporosis.

Authors:  Isaac Castro-Mateos; Jose M Pozo; Timothy F Cootes; J Mark Wilkinson; Richard Eastell; Alejandro F Frangi
Journal:  Curr Osteoporos Rep       Date:  2014-06       Impact factor: 5.096

  10 in total

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