Literature DB >> 25980389

Shape analysis based on depth-ordering.

Yi Hong1, Yi Gao2, Marc Niethammer3, Sylvain Bouix4.   

Abstract

In this paper we propose a new method for shape analysis based on the ordering of shapes using band-depth. We use this band-depth to non-parametrically define a global depth for a shape with respect to a reference population, typically consisting of normal control subjects. This allows us to globally quantify differences with respect to "normality". Using the depth-ordering of shapes also allows the detection of localized shape differences by using α-central values of shapes. We propose permutation tests to statistically assess global and local shape differences. We further determine the directionality of shape differences (local inflation versus deflation). The method is evaluated on a synthetically generated striatum dataset, and applied to detect shape differences in the hippocampus between subjects with first-episode schizophrenia and normal controls.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Depth-ordering of shape; Global analysis; Local analysis; Shape analysis

Mesh:

Year:  2015        PMID: 25980389      PMCID: PMC4540634          DOI: 10.1016/j.media.2015.04.004

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  15 in total

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Authors:  Moo K Chung; Kim M Dalton; Richard J Davidson
Journal:  IEEE Trans Med Imaging       Date:  2008-08       Impact factor: 10.048

2.  Particle-based shape analysis of multi-object complexes.

Authors:  Joshua Cates; P Thomas Fletcher; Martin Styner; Heather Cody Hazlett; Ross Whitaker
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

3.  The 4D hyperspherical diffusion wavelet: A new method for the detection of localized anatomical variation.

Authors:  Ameer Pasha Hosseinbor; Won Hwa Kim; Nagesh Adluru; Amit Acharya; Houri K Vorperian; Moo K Chung
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4.  Weighted functional boxplot with application to statistical atlas construction.

Authors:  Yi Hong; Brad Davis; J S Marron; Roland Kwitt; Marc Niethammer
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5.  Shape analysis, a field in need of careful validation.

Authors:  Yi Gao; Tammy Riklin-Raviv; Sylvain Bouix
Journal:  Hum Brain Mapp       Date:  2014-04-19       Impact factor: 5.038

6.  Localized differences in caudate and hippocampal shape are associated with schizophrenia but not antipsychotic type.

Authors:  Robert K McClure; Martin Styner; Eric Maltbie; Jeffrey A Lieberman; Sylvain Gouttard; Guido Gerig; Xiaoyan Shi; Hongtu Zhu
Journal:  Psychiatry Res       Date:  2012-11-09       Impact factor: 3.222

7.  BrainPrint: identifying subjects by their brain.

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Journal:  Med Image Comput Comput Assist Interv       Date:  2014

8.  Laplace-Beltrami Eigenvalues and Topological Features of Eigenfunctions for Statistical Shape Analysis.

Authors:  Martin Reuter; Franz-Erich Wolter; Martha Shenton; Marc Niethammer
Journal:  Comput Aided Des       Date:  2009-10-01       Impact factor: 3.027

9.  Boundary and medial shape analysis of the hippocampus in schizophrenia.

Authors:  Martin Styner; Jeffrey A Lieberman; Dimitrios Pantazis; Guido Gerig
Journal:  Med Image Anal       Date:  2004-09       Impact factor: 8.545

10.  Statistical atlas construction via weighted functional boxplots.

Authors:  Yi Hong; Brad Davis; J S Marron; Roland Kwitt; Nikhil Singh; Julia S Kimbell; Elizabeth Pitkin; Richard Superfine; Stephanie D Davis; Carlton J Zdanski; Marc Niethammer
Journal:  Med Image Anal       Date:  2014-03-29       Impact factor: 8.545

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