Literature DB >> 20620211

General multivariate linear modeling of surface shapes using SurfStat.

Moo K Chung1, Keith J Worsley, Brendon M Nacewicz, Kim M Dalton, Richard J Davidson.   

Abstract

Although there are many imaging studies on traditional ROI-based amygdala volumetry, there are very few studies on modeling amygdala shape variations. This paper presents a unified computational and statistical framework for modeling amygdala shape variations in a clinical population. The weighted spherical harmonic representation is used to parameterize, smooth out, and normalize amygdala surfaces. The representation is subsequently used as an input for multivariate linear models accounting for nuisance covariates such as age and brain size difference using the SurfStat package that completely avoids the complexity of specifying design matrices. The methodology has been applied for quantifying abnormal local amygdala shape variations in 22 high functioning autistic subjects. Copyright 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20620211      PMCID: PMC3056984          DOI: 10.1016/j.neuroimage.2010.06.032

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  53 in total

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Review 5.  Statistical methods in computational anatomy.

Authors:  M Miller; A Banerjee; G Christensen; S Joshi; N Khaneja; U Grenander; L Matejic
Journal:  Stat Methods Med Res       Date:  1997-09       Impact factor: 3.021

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Journal:  Eur J Neurosci       Date:  1999-06       Impact factor: 3.386

Review 7.  Computational anatomy and neuropsychiatric disease: probabilistic assessment of variation and statistical inference of group difference, hemispheric asymmetry, and time-dependent change.

Authors:  John G Csernansky; Lei Wang; Sarang C Joshi; J Tilak Ratnanather; Michael I Miller
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

8.  Detecting structural changes in whole brain based on nonlinear deformations-application to schizophrenia research.

Authors:  C Gaser; H P Volz; S Kiebel; S Riehemann; H Sauer
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9.  The amygdala is enlarged in children but not adolescents with autism; the hippocampus is enlarged at all ages.

Authors:  Cynthia Mills Schumann; Julia Hamstra; Beth L Goodlin-Jones; Linda J Lotspeich; Hower Kwon; Michael H Buonocore; Cathy R Lammers; Allan L Reiss; David G Amaral
Journal:  J Neurosci       Date:  2004-07-14       Impact factor: 6.167

Review 10.  Identifying neurocognitive phenotypes in autism.

Authors:  Helen Tager-Flusberg; Robert M Joseph
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2003-02-28       Impact factor: 6.237

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  62 in total

1.  Integrative Bayesian analysis of neuroimaging-genetic data with application to cocaine dependence.

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2.  Structural and Maturational Covariance in Early Childhood Brain Development.

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3.  Hippocampal substructural vulnerability to sleep disturbance and cognitive impairment in patients with chronic primary insomnia: magnetic resonance imaging morphometry.

Authors:  Eun Yeon Joo; Hosung Kim; Sooyeon Suh; Seung Bong Hong
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4.  Quantitative mapping of trimethyltin injury in the rat brain using magnetic resonance histology.

Authors:  G Allan Johnson; Evan Calabrese; Peter B Little; Laurence Hedlund; Yi Qi; Alexandra Badea
Journal:  Neurotoxicology       Date:  2014-03-11       Impact factor: 4.294

5.  Modulative effects of COMT haplotype on age-related associations with brain morphology.

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Journal:  Hum Brain Mapp       Date:  2016-02-27       Impact factor: 5.038

6.  Projection regression models for multivariate imaging phenotype.

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Journal:  Genet Epidemiol       Date:  2012-07-16       Impact factor: 2.135

7.  4D hyperspherical harmonic (HyperSPHARM) representation of multiple disconnected brain subcortical structures.

Authors:  Ameer Pasha Hosseinbor; Moo K Chung; Stacey M Schaefer; Carien M van Reekum; Lara Peschke-Schmitz; Matt Sutterer; Andrew L Alexander; Richard J Davidson
Journal:  Med Image Comput Comput Assist Interv       Date:  2013

8.  Surface fluid registration of conformal representation: application to detect disease burden and genetic influence on hippocampus.

Authors:  Jie Shi; Paul M Thompson; Boris Gutman; Yalin Wang
Journal:  Neuroimage       Date:  2013-04-13       Impact factor: 6.556

9.  In vivo hippocampal subfield shape related to TDP-43, amyloid beta, and tau pathologies.

Authors:  Veronika Hanko; Alexandra C Apple; Kathryn I Alpert; Kristen N Warren; Julie A Schneider; Konstantinos Arfanakis; David A Bennett; Lei Wang
Journal:  Neurobiol Aging       Date:  2018-10-25       Impact factor: 4.673

10.  Regionally specific increased volume of the amygdala in Williams syndrome: evidence from surface-based modeling.

Authors:  Brian W Haas; Kristen Sheau; Ryan G Kelley; Paul M Thompson; Allan L Reiss
Journal:  Hum Brain Mapp       Date:  2012-11-14       Impact factor: 5.038

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