Literature DB >> 18643461

Receptor noise and directional sensing in eukaryotic chemotaxis.

Wouter-Jan Rappel1, Herbert Levine.   

Abstract

Chemotacting eukaryotic cells are able to detect very small chemical gradients (approximately 1%) for a large range of background concentrations. For these chemical environments, fluctuations in the number of bound ligands will become important. Here, we investigate the effect of receptor noise in a simplified one-dimensional geometry. The auto- and cross-correlations of the noise sources at the front and the back of the cell are explicitly computed using an effective Monte Carlo simulation tool. The resulting stochastic equations for the investigated directional sensing model can be solved analytically in Fourier space. We determine the chemotactic efficiency, a measure of motility for the cell, as a function of several experimental parameters, leading to explicit experimental predictions.

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Year:  2008        PMID: 18643461      PMCID: PMC2738688          DOI: 10.1103/PhysRevLett.100.228101

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  16 in total

Review 1.  A cell's sense of direction.

Authors:  C A Parent; P N Devreotes
Journal:  Science       Date:  1999-04-30       Impact factor: 47.728

Review 2.  Chemotaxis: signalling the way forward.

Authors:  Peter J M Van Haastert; Peter N Devreotes
Journal:  Nat Rev Mol Cell Biol       Date:  2004-08       Impact factor: 94.444

3.  Noisy signal amplification in ultrasensitive signal transduction.

Authors:  Tatsuo Shibata; Koichi Fujimoto
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-29       Impact factor: 11.205

4.  Directional sensing in eukaryotic chemotaxis: a balanced inactivation model.

Authors:  Herbert Levine; David A Kessler; Wouter-Jan Rappel
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-16       Impact factor: 11.205

5.  Quantifying noise levels of intercellular signals.

Authors:  Kai Wang; Wouter-Jan Rappel; Rex Kerr; Herbert Levine
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2007-06-05

6.  Biased random walk by stochastic fluctuations of chemoattractant-receptor interactions at the lower limit of detection.

Authors:  Peter J M van Haastert; Marten Postma
Journal:  Biophys J       Date:  2007-05-18       Impact factor: 4.033

7.  Stochastic signal processing and transduction in chemotactic response of eukaryotic cells.

Authors:  Masahiro Ueda; Tatsuo Shibata
Journal:  Biophys J       Date:  2007-04-06       Impact factor: 4.033

8.  Dictyostelium discoideum chemotaxis: threshold for directed motion.

Authors:  Loling Song; Sharvari M Nadkarni; Hendrik U Bödeker; Carsten Beta; Albert Bae; Carl Franck; Wouter-Jan Rappel; William F Loomis; Eberhard Bodenschatz
Journal:  Eur J Cell Biol       Date:  2006-03-10       Impact factor: 4.492

9.  Diffusion-limited phase separation in eukaryotic chemotaxis.

Authors:  Andrea Gamba; Antonio de Candia; Stefano Di Talia; Antonio Coniglio; Federico Bussolino; Guido Serini
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-16       Impact factor: 11.205

10.  Orientation of chemotactic cells and growth cones: models and mechanisms.

Authors:  H Meinhardt
Journal:  J Cell Sci       Date:  1999-09       Impact factor: 5.285

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  20 in total

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Authors:  Daniel Irimia
Journal:  Annu Rev Biomed Eng       Date:  2010-08-15       Impact factor: 9.590

2.  External and internal constraints on eukaryotic chemotaxis.

Authors:  Danny Fuller; Wen Chen; Micha Adler; Alex Groisman; Herbert Levine; Wouter-Jan Rappel; William F Loomis
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-10       Impact factor: 11.205

3.  Transient localized patterns in noise-driven reaction-diffusion systems.

Authors:  Inbal Hecht; David A Kessler; Herbert Levine
Journal:  Phys Rev Lett       Date:  2010-04-14       Impact factor: 9.161

4.  Physical limits on cellular sensing of spatial gradients.

Authors:  Bo Hu; Wen Chen; Wouter-Jan Rappel; Herbert Levine
Journal:  Phys Rev Lett       Date:  2010-07-23       Impact factor: 9.161

5.  Adaptive-control model for neutrophil orientation in the direction of chemical gradients.

Authors:  Daniel Irimia; Gábor Balázsi; Nitin Agrawal; Mehmet Toner
Journal:  Biophys J       Date:  2009-05-20       Impact factor: 4.033

6.  Receptor noise limitations on chemotactic sensing.

Authors:  Wouter-Jan Rappel; Herbert Levine
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-08       Impact factor: 11.205

7.  High fidelity information processing in folic acid chemotaxis of Dictyostelium amoebae.

Authors:  Igor Segota; Surin Mong; Eitan Neidich; Archana Rachakonda; Catherine J Lussenhop; Carl Franck
Journal:  J R Soc Interface       Date:  2013-09-11       Impact factor: 4.118

8.  The local cell curvature guides pseudopodia towards chemoattractants.

Authors:  Peter J M Van Haastert; Leonard Bosgraaf
Journal:  HFSP J       Date:  2009-08-07

9.  Optimal resource allocation in cellular sensing systems.

Authors:  Christopher C Govern; Pieter Rein Ten Wolde
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-24       Impact factor: 11.205

10.  How input noise limits biochemical sensing in ultrasensitive systems.

Authors:  Bo Hu; Wouter-Jan Rappel; Herbert Levine
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2014-09-05
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