Literature DB >> 24026470

High fidelity information processing in folic acid chemotaxis of Dictyostelium amoebae.

Igor Segota1, Surin Mong, Eitan Neidich, Archana Rachakonda, Catherine J Lussenhop, Carl Franck.   

Abstract

Living cells depend upon the detection of chemical signals for their existence. Eukaryotic cells can sense a concentration difference as low as a few per cent across their bodies. This process was previously suggested to be limited by the receptor-ligand binding fluctuations. Here, we first determine the chemotaxis response of Dictyostelium cells to static folic acid gradients and show that they can significantly exceed this sensitivity, responding to gradients as shallow as 0.2% across the cell body. Second, using a previously developed information theory framework, we compare the total information gained about the gradient (based on the cell response) to its upper limit: the information gained at the receptor-ligand binding step. We find that the model originally applied to cAMP sensing fails as demonstrated by the violation of the data processing inequality, i.e. the total information exceeds the information at the receptor-ligand binding step. We propose an extended model with multiple known receptor types and with cells allowed to perform several independent measurements of receptor occupancy. This does not violate the data processing inequality and implies the receptor-ligand binding noise dominates both for low- and high-chemoattractant concentrations. We also speculate that the interplay between exploration and exploitation is used as a strategy for accurate sensing of otherwise unmeasurable levels of a chemoattractant.

Entities:  

Keywords:  Dictyostelium; chemotaxis; information theory

Mesh:

Substances:

Year:  2013        PMID: 24026470      PMCID: PMC3785827          DOI: 10.1098/rsif.2013.0606

Source DB:  PubMed          Journal:  J R Soc Interface        ISSN: 1742-5662            Impact factor:   4.118


  27 in total

1.  Directional sensing in eukaryotic chemotaxis: a balanced inactivation model.

Authors:  Herbert Levine; David A Kessler; Wouter-Jan Rappel
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-16       Impact factor: 11.205

2.  Biased random walk by stochastic fluctuations of chemoattractant-receptor interactions at the lower limit of detection.

Authors:  Peter J M van Haastert; Marten Postma
Journal:  Biophys J       Date:  2007-05-18       Impact factor: 4.033

Review 3.  Chemotaxis in eukaryotic cells: a focus on leukocytes and Dictyostelium.

Authors:  P N Devreotes; S H Zigmond
Journal:  Annu Rev Cell Biol       Date:  1988

4.  Folate reception by vegetative Dictyostelium discoideum amoebae: distribution of receptors and trafficking of ligand.

Authors:  J L Rifkin
Journal:  Cell Motil Cytoskeleton       Date:  2001-02

5.  Folic acid as second chemotactic substance in the cellular slime moulds.

Authors:  P Pan; E M Hall; J T Bonner
Journal:  Nat New Biol       Date:  1972-06-07

6.  Automated characterization of cell shape changes during amoeboid motility by skeletonization.

Authors:  Yuan Xiong; Cathryn Kabacoff; Jonathan Franca-Koh; Peter N Devreotes; Douglas N Robinson; Pablo A Iglesias
Journal:  BMC Syst Biol       Date:  2010-03-24

7.  Desensitization of G-protein-coupled receptors. agonist-induced phosphorylation of the chemoattractant receptor cAR1 lowers its intrinsic affinity for cAMP.

Authors:  Z Xiao; Y Yao; Y Long; P Devreotes
Journal:  J Biol Chem       Date:  1999-01-15       Impact factor: 5.157

8.  Reversible binding of the chemoattractant folic acid to cells of Dictyostelium discoideum.

Authors:  B Wurster; U Butz
Journal:  Eur J Biochem       Date:  1980-08

9.  Delineating the core regulatory elements crucial for directed cell migration by examining folic-acid-mediated responses.

Authors:  Kamalakkannan Srinivasan; Gus A Wright; Nicole Hames; Max Housman; Alayna Roberts; Karl J Aufderheide; Chris Janetopoulos
Journal:  J Cell Sci       Date:  2012-11-06       Impact factor: 5.285

10.  Quantitative analysis of cell motility and chemotaxis in Dictyostelium discoideum by using an image processing system and a novel chemotaxis chamber providing stationary chemical gradients.

Authors:  P R Fisher; R Merkl; G Gerisch
Journal:  J Cell Biol       Date:  1989-03       Impact factor: 10.539

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  2 in total

1.  Cell-to-cell variation sets a tissue-rheology-dependent bound on collective gradient sensing.

Authors:  Brian A Camley; Wouter-Jan Rappel
Journal:  Proc Natl Acad Sci U S A       Date:  2017-11-07       Impact factor: 11.205

Review 2.  Collective gradient sensing and chemotaxis: modeling and recent developments.

Authors:  Brian A Camley
Journal:  J Phys Condens Matter       Date:  2018-04-12       Impact factor: 2.333

  2 in total

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