Literature DB >> 20457897

External and internal constraints on eukaryotic chemotaxis.

Danny Fuller1, Wen Chen, Micha Adler, Alex Groisman, Herbert Levine, Wouter-Jan Rappel, William F Loomis.   

Abstract

Chemotaxis, the chemically guided movement of cells, plays an important role in several biological processes including cancer, wound healing, and embryogenesis. Chemotacting cells are able to sense shallow chemical gradients where the concentration of chemoattractant differs by only a few percent from one side of the cell to the other, over a wide range of local concentrations. Exactly what limits the chemotactic ability of these cells is presently unclear. Here we determine the chemotactic response of Dictyostelium cells to exponential gradients of varying steepness and local concentration of the chemoattractant cAMP. We find that the cells are sensitive to the steepness of the gradient as well as to the local concentration. Using information theory techniques, we derive a formula for the mutual information between the input gradient and the spatial distribution of bound receptors and also compute the mutual information between the input gradient and the motility direction in the experiments. A comparison between these quantities reveals that for shallow gradients, in which the concentration difference between the back and the front of a 10-mum-diameter cell is <5%, and for small local concentrations (<10 nM) the intracellular information loss is insignificant. Thus, external fluctuations due to the finite number of receptors dominate and limit the chemotactic response. For steeper gradients and higher local concentrations, the intracellular information processing is suboptimal and results in a smaller mutual information between the input gradient and the motility direction than would have been predicted from the ligand-receptor binding process.

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Year:  2010        PMID: 20457897      PMCID: PMC2906906          DOI: 10.1073/pnas.0911178107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

1.  Localization of the G protein betagamma complex in living cells during chemotaxis.

Authors:  T Jin; N Zhang; Y Long; C A Parent; P N Devreotes
Journal:  Science       Date:  2000-02-11       Impact factor: 47.728

2.  Spatial control of actin polymerization during neutrophil chemotaxis.

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Journal:  Nat Cell Biol       Date:  1999-06       Impact factor: 28.824

Review 3.  Chemotaxis: signalling the way forward.

Authors:  Peter J M Van Haastert; Peter N Devreotes
Journal:  Nat Rev Mol Cell Biol       Date:  2004-08       Impact factor: 94.444

4.  Bayesian model predicts the response of axons to molecular gradients.

Authors:  Duncan Mortimer; Julia Feldner; Timothy Vaughan; Irina Vetter; Zac Pujic; William J Rosoff; Kevin Burrage; Peter Dayan; Linda J Richards; Geoffrey J Goodhill
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-18       Impact factor: 11.205

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Authors:  M Sussman
Journal:  Methods Cell Biol       Date:  1987       Impact factor: 1.441

7.  Single-molecule analysis of chemotactic signaling in Dictyostelium cells.

Authors:  M Ueda; Y Sako; T Tanaka; P Devreotes; T Yanagida
Journal:  Science       Date:  2001-10-26       Impact factor: 47.728

Review 8.  A contextual framework for characterizing motility and chemotaxis mutants in Dictyostelium discoideum.

Authors:  David R Soll; Deborah Wessels; Paul J Heid; Hui Zhang
Journal:  J Muscle Res Cell Motil       Date:  2002       Impact factor: 2.698

9.  Binding of cAMP and adenosine derivatives to Dictyostelium discoideum cells. Relationships of binding, chemotactic, and antagonistic activities.

Authors:  P J Van Haastert
Journal:  J Biol Chem       Date:  1983-08-25       Impact factor: 5.157

10.  Human polymorphonuclear leukocytes respond to waves of chemoattractant, like Dictyostelium.

Authors:  Jeremy Geiger; Deborah Wessels; David R Soll
Journal:  Cell Motil Cytoskeleton       Date:  2003-09
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  57 in total

1.  Noise effects in nonlinear biochemical signaling.

Authors:  Neda Bostani; David A Kessler; Nadav M Shnerb; Wouter-Jan Rappel; Herbert Levine
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2012-01-03

Review 2.  Genetic control of morphogenesis in Dictyostelium.

Authors:  William F Loomis
Journal:  Dev Biol       Date:  2015-04-11       Impact factor: 3.582

3.  Biased migration of confined neutrophil-like cells in asymmetric hydraulic environments.

Authors:  Harrison V Prentice-Mott; Chi-Han Chang; L Mahadevan; Timothy J Mitchison; Daniel Irimia; Jagesh V Shah
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-09       Impact factor: 11.205

4.  High fidelity information processing in folic acid chemotaxis of Dictyostelium amoebae.

Authors:  Igor Segota; Surin Mong; Eitan Neidich; Archana Rachakonda; Catherine J Lussenhop; Carl Franck
Journal:  J R Soc Interface       Date:  2013-09-11       Impact factor: 4.118

5.  Microfluidic analysis of extracellular matrix-bFGF crosstalk on primary human myoblast chemoproliferation, chemokinesis, and chemotaxis.

Authors:  Meghaan M Ferreira; Ruby E Dewi; Sarah C Heilshorn
Journal:  Integr Biol (Camb)       Date:  2015-04-24       Impact factor: 2.192

6.  How receptor diffusion influences gradient sensing.

Authors:  H Nguyen; P Dayan; G J Goodhill
Journal:  J R Soc Interface       Date:  2015-01-06       Impact factor: 4.118

7.  A dual-docking microfluidic cell migration assay (D2-Chip) for testing neutrophil chemotaxis and the memory effect.

Authors:  Ke Yang; Jiandong Wu; Guoqing Xu; Dongxue Xie; Hagit Peretz-Soroka; Susy Santos; Murray Alexander; Ling Zhu; Michael Zhang; Yong Liu; Francis Lin
Journal:  Integr Biol (Camb)       Date:  2017-04-18       Impact factor: 2.192

8.  Systems biology. How information theory handles cell signaling and uncertainty.

Authors:  Matthew D Brennan; Raymond Cheong; Andre Levchenko
Journal:  Science       Date:  2012-10-19       Impact factor: 47.728

9.  Spatial information analysis of chemotactic trajectories.

Authors:  Jan H Hoh; William F Heinz; Jeffrey L Werbin
Journal:  J Biol Phys       Date:  2011-12-17       Impact factor: 1.365

10.  αTAT1 catalyses microtubule acetylation at clathrin-coated pits.

Authors:  Guillaume Montagnac; Vannary Meas-Yedid; Marie Irondelle; Antonio Castro-Castro; Michel Franco; Toshinobu Shida; Maxence V Nachury; Alexandre Benmerah; Jean-Christophe Olivo-Marin; Philippe Chavrier
Journal:  Nature       Date:  2013-10-06       Impact factor: 49.962

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