Literature DB >> 20482022

Transient localized patterns in noise-driven reaction-diffusion systems.

Inbal Hecht1, David A Kessler, Herbert Levine.   

Abstract

Noise can induce excitable systems to make time-limited transitions between quiescent and active states. Here we investigate the possibility that these transitions occur locally in a spatially extended medium, leading to the occurrence of spatiotemporal patches of activation. We show that this can in fact occur in a parameter range such that there exist (in general unstable) localized solutions of the governing deterministic reaction-diffusion equations. Our work is motivated by a recent biological example showing transiently excited cell membrane regions.

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Year:  2010        PMID: 20482022      PMCID: PMC2882887          DOI: 10.1103/PhysRevLett.104.158301

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  15 in total

Review 1.  A cell's sense of direction.

Authors:  C A Parent; P N Devreotes
Journal:  Science       Date:  1999-04-30       Impact factor: 47.728

2.  Models of eukaryotic gradient sensing: application to chemotaxis of amoebae and neutrophils.

Authors:  Andre Levchenko; Pablo A Iglesias
Journal:  Biophys J       Date:  2002-01       Impact factor: 4.033

3.  Temporally harmonic oscillons in newtonian fluids

Authors: 
Journal:  Phys Rev Lett       Date:  2000-07-24       Impact factor: 9.161

4.  Wave nucleation rate in excitable systems in the low noise limit.

Authors:  Hervé Henry; Herbert Levine
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2003-09-30

5.  Excitability mediated by localized structures in a dissipative nonlinear optical cavity.

Authors:  Damià Gomila; Manuel A Matías; Pere Colet
Journal:  Phys Rev Lett       Date:  2005-02-18       Impact factor: 9.161

6.  Localized patterns in reaction-diffusion systems.

Authors:  Vladimir K Vanag; Irving R Epstein
Journal:  Chaos       Date:  2007-09       Impact factor: 3.642

7.  Membrane-bound Turing patterns.

Authors:  Herbert Levine; Wouter-Jan Rappel
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2005-12-19

8.  An excitable gene regulatory circuit induces transient cellular differentiation.

Authors:  Gürol M Süel; Jordi Garcia-Ojalvo; Louisa M Liberman; Michael B Elowitz
Journal:  Nature       Date:  2006-03-23       Impact factor: 49.962

9.  Uniform cAMP stimulation of Dictyostelium cells induces localized patches of signal transduction and pseudopodia.

Authors:  Marten Postma; Jeroen Roelofs; Joachim Goedhart; Theodorus W J Gadella; Antonie J W G Visser; Peter J M Van Haastert
Journal:  Mol Biol Cell       Date:  2003-10-31       Impact factor: 4.138

10.  Localized Ras signaling at the leading edge regulates PI3K, cell polarity, and directional cell movement.

Authors:  Atsuo T Sasaki; Cheryl Chun; Kosuke Takeda; Richard A Firtel
Journal:  J Cell Biol       Date:  2004-11-08       Impact factor: 10.539

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  37 in total

1.  Excitable actin dynamics in lamellipodial protrusion and retraction.

Authors:  Gillian L Ryan; Heather M Petroccia; Naoki Watanabe; Dimitrios Vavylonis
Journal:  Biophys J       Date:  2012-04-03       Impact factor: 4.033

2.  Diverse sensitivity thresholds in dynamic signaling responses by social amoebae.

Authors:  C Joanne Wang; Adriel Bergmann; Benjamin Lin; Kyuri Kim; Andre Levchenko
Journal:  Sci Signal       Date:  2012-02-28       Impact factor: 8.192

3.  Cells navigate with a local-excitation, global-inhibition-biased excitable network.

Authors:  Yuan Xiong; Chuan-Hsiang Huang; Pablo A Iglesias; Peter N Devreotes
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-23       Impact factor: 11.205

4.  Intracellular encoding of spatiotemporal guidance cues in a self-organizing signaling system for chemotaxis in Dictyostelium cells.

Authors:  Tatsuo Shibata; Masatoshi Nishikawa; Satomi Matsuoka; Masahiro Ueda
Journal:  Biophys J       Date:  2013-11-05       Impact factor: 4.033

5.  Modeling self-organized spatio-temporal patterns of PIP₃ and PTEN during spontaneous cell polarization.

Authors:  Fabian Knoch; Marco Tarantola; Eberhard Bodenschatz; Wouter-Jan Rappel
Journal:  Phys Biol       Date:  2014-07-15       Impact factor: 2.583

6.  Stochastic transitions in a bistable reaction system on the membrane.

Authors:  Marek Kochanczyk; Joanna Jaruszewicz; Tomasz Lipniacki
Journal:  J R Soc Interface       Date:  2013-05-01       Impact factor: 4.118

Review 7.  Chemoattractant signaling in dictyostelium: adaptation and amplification.

Authors:  Pablo A Iglesias
Journal:  Sci Signal       Date:  2012-02-28       Impact factor: 8.192

Review 8.  Moving towards a paradigm: common mechanisms of chemotactic signaling in Dictyostelium and mammalian leukocytes.

Authors:  Yulia Artemenko; Thomas J Lampert; Peter N Devreotes
Journal:  Cell Mol Life Sci       Date:  2014-05-21       Impact factor: 9.261

9.  An excitable compass guides chemotaxis?

Authors:  William R Holmes
Journal:  Biophys J       Date:  2014-03-04       Impact factor: 4.033

10.  Excitable signal transduction induces both spontaneous and directional cell asymmetries in the phosphatidylinositol lipid signaling system for eukaryotic chemotaxis.

Authors:  Masatoshi Nishikawa; Marcel Hörning; Masahiro Ueda; Tatsuo Shibata
Journal:  Biophys J       Date:  2014-02-04       Impact factor: 4.033

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