Literature DB >> 17937398

4-chloroprolines: synthesis, conformational analysis, and effect on the collagen triple helix.

Matthew D Shoulders1, Ilia A Guzei, Ronald T Raines.   

Abstract

Collagen is an abundant, triple-helical protein comprising three strands of the repeating sequence: Xaa-Yaa-Gly. (2S)-Proline and (2S,4R)-4-hydroxyproline (Hyp) are common in the primary structure of collagen. Here, we use nonnatural proline derivatives to reveal determinants of collagen stability. Specifically, we report high-yielding syntheses of (2S,4S)-4-chloroproline (clp) and (2S,4R)-4-chloroproline (Clp). We find that the molecular structure of Ac-Clp-OMe in the solid state is virtually identical to that of Ac-Hyp-OMe. In contrast, the conformational properties of Ac-clp-OMe are similar to those of Ac-Pro-OMe. Ac-Clp-OMe has a stronger preference for a trans amide bond than does Ac-Pro-OMe, whereas Ac-clp-OMe has a weaker preference. (Pro-Clp-Gly)(10) forms triple helices that are significantly more stable than those of (Pro-Pro-Gly)(10). Triple helices of (clp-Pro-Gly)(10) have stability similar to those of (Pro-Pro-Gly)(10). Unlike (Pro-Clp-Gly)(10) and (clp-Pro-Gly)(10), (clp-Clp-Gly)(10) does not form a stable triple helix, presumably due to a deleterious steric interaction between proximal chlorines on different strands. These data, which are consistent with previous work on 4-fluoroprolines and 4-methylprolines, support the importance of stereoelectronic and steric effects in the stability of the collagen triple helix and provide another means to modulate that stability. (

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 17937398      PMCID: PMC2802577          DOI: 10.1002/bip.20864

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  62 in total

1.  Conformational stability of collagen relies on a stereoelectronic effect.

Authors:  L E Bretscher; C L Jenkins; K M Taylor; M L DeRider; R T Raines
Journal:  J Am Chem Soc       Date:  2001-01-31       Impact factor: 15.419

2.  Synthesis, biological evaluation, and pharmacokinetic study of prolyl-1-piperazinylacetic acid and prolyl-4-piperidinylacetic acid derivatives as VLA-4 antagonists.

Authors:  Jun Chiba; Gensuke Takayama; Tohru Takashi; Mika Yokoyama; Atsushi Nakayama; John J Baldwin; Edward McDonald; Kevin J Moriarty; Christopher R Sarko; Kurt W Saionz; Robert Swanson; Zahid Hussain; Angela Wong; Nobuo Machinaga
Journal:  Bioorg Med Chem       Date:  2005-12-27       Impact factor: 3.641

3.  Stereoelectronic effects on polyproline conformation.

Authors:  Jia-Cherng Horng; Ronald T Raines
Journal:  Protein Sci       Date:  2006-01       Impact factor: 6.725

4.  Glycosylation/Hydroxylation-induced stabilization of the collagen triple helix. 4-trans-hydroxyproline in the Xaa position can stabilize the triple helix.

Authors:  J G Bann; H P Bächinger
Journal:  J Biol Chem       Date:  2000-08-11       Impact factor: 5.157

5.  Crystal and molecular structure of a collagen-like peptide at 1.9 A resolution.

Authors:  J Bella; M Eaton; B Brodsky; H M Berman
Journal:  Science       Date:  1994-10-07       Impact factor: 47.728

6.  Low temperature circular dichroism of poly (glycyl-L-prolyl-L-alanine).

Authors:  F R Brown; J P Carver; E R Blout
Journal:  J Mol Biol       Date:  1969-01       Impact factor: 5.469

7.  Collagen stability: insights from NMR spectroscopic and hybrid density functional computational investigations of the effect of electronegative substituents on prolyl ring conformations.

Authors:  Michele L DeRider; Steven J Wilkens; Michael J Waddell; Lynn E Bretscher; Frank Weinhold; Ronald T Raines; John L Markley
Journal:  J Am Chem Soc       Date:  2002-03-20       Impact factor: 15.419

8.  The "azido gauche effect"-implications for the conformation of azidoprolines.

Authors:  Louis-Sebastian Sonntag; Sabine Schweizer; Christian Ochsenfeld; Helma Wennemers
Journal:  J Am Chem Soc       Date:  2006-11-15       Impact factor: 15.419

9.  Two prolines with a difference: contrasting stereoelectronic effects of 4R/S-aminoproline on triplex stability in collagen peptides [pro(X)-pro(Y)-Gly]n.

Authors:  M Umashankara; I Ramesh Babu; Krishna N Ganesh
Journal:  Chem Commun (Camb)       Date:  2003-10-21       Impact factor: 6.222

10.  A (4R)- or a (4S)-fluoroproline residue in position Xaa of the (Xaa-Yaa-Gly) collagen repeat severely affects triple-helix formation.

Authors:  Dirk Barth; Alexander G Milbradt; Christian Renner; Luis Moroder
Journal:  Chembiochem       Date:  2004-01-03       Impact factor: 3.164

View more
  28 in total

1.  Stabilization of the collagen triple helix by O-methylation of hydroxyproline residues.

Authors:  Frank W Kotch; Ilia A Guzei; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2008-02-14       Impact factor: 15.419

2.  Stereoelectronic and steric effects in side chains preorganize a protein main chain.

Authors:  Matthew D Shoulders; Kenneth A Satyshur; Katrina T Forest; Ronald T Raines
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-31       Impact factor: 11.205

3.  Signature of n→π* interactions in α-helices.

Authors:  Amit Choudhary; Ronald T Raines
Journal:  Protein Sci       Date:  2011-04-26       Impact factor: 6.725

4.  Interstrand dipole-dipole interactions can stabilize the collagen triple helix.

Authors:  Matthew D Shoulders; Ronald T Raines
Journal:  J Biol Chem       Date:  2011-04-10       Impact factor: 5.157

5.  The aberrance of the 4S diastereomer of 4-hydroxyproline.

Authors:  Matthew D Shoulders; Frank W Kotch; Amit Choudhary; Ilia A Guzei; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2010-08-11       Impact factor: 15.419

6.  Synthesis of 5-fluoro- and 5-hydroxymethanoprolines via lithiation of N-BOC-methanopyrrolidines. Constrained Cγ-exo and Cγ-endo Flp and Hyp conformer mimics.

Authors:  Grant R Krow; Matthew D Shoulders; Ramakrishna Edupuganti; Deepa Gandla; Fang Yu; Philip E Sonnet; Matthew Sender; Amit Choudhary; Charles DeBrosse; Charles W Ross; Patrick Carroll; Ronald T Raines
Journal:  J Org Chem       Date:  2012-05-25       Impact factor: 4.354

7.  Modulation of an n→π* interaction with α-fluoro groups.

Authors:  Amit Choudhary; Charles G Fry; Ronald T Raines
Journal:  ARKIVOC       Date:  2010-07-08       Impact factor: 1.140

8.  Intimate interactions with carbonyl groups: dipole-dipole or n→π*?

Authors:  Kimberli J Kamer; Amit Choudhary; Ronald T Raines
Journal:  J Org Chem       Date:  2012-12-10       Impact factor: 4.354

9.  Origin of the stability conferred upon collagen by fluorination.

Authors:  Matthew D Shoulders; Kimberli J Kamer; Ronald T Raines
Journal:  Bioorg Med Chem Lett       Date:  2009-04-21       Impact factor: 2.823

10.  Nature of amide carbonyl--carbonyl interactions in proteins.

Authors:  Amit Choudhary; Deepa Gandla; Grant R Krow; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2009-06-03       Impact factor: 15.419

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.