Literature DB >> 20681719

The aberrance of the 4S diastereomer of 4-hydroxyproline.

Matthew D Shoulders1, Frank W Kotch, Amit Choudhary, Ilia A Guzei, Ronald T Raines.   

Abstract

Prolyl 4-hydroxylases install a hydroxyl group in the 4R configuration on the gamma-carbon atom of certain (2S)-proline (Pro) residues in tropocollagen, elastin, and other proteins to form (2S,4R)-4-hydroxyproline (Hyp). The gauche effect arising from this prevalent post-translational modification enforces a C(gamma)-exo ring pucker and stabilizes the collagen triple helix. The Hyp diastereomer (2S,4S)-4-hydroxyproline (hyp) has not been observed in a protein, despite the ability of electronegative 4S substituents to enforce the more common C(gamma)-endo ring pucker of Pro. Here, we use density functional theory, spectroscopy, crystallography, and calorimetry to explore the consequences of hyp incorporation on protein stability using a collagen model system. We find that the 4S-hydroxylation of Pro to form hyp does indeed enforce a C(gamma)-endo ring pucker but a transannular hydrogen bond between the hydroxyl moiety and the carbonyl of hyp distorts the main-chain torsion angles that typically accompany a C(gamma)-endo ring pucker. This same transannular hydrogen bond enhances an n-->pi* interaction that stabilizes the trans conformation of the peptide bond preceding hyp, endowing hyp with the unusual combination of a C(gamma)-endo ring pucker and high trans/cis ratio. O-Methylation of hyp to form (2S,4S)-4-methoxyproline (mop) eliminates the transannular hydrogen bond and restores a prototypical C(gamma)-endo pucker. mop residues endow the collagen triple helix with much more conformational stability than do hyp residues. These findings highlight the critical importance of the configuration of the hydroxyl group installed on C(gamma) of proline residues.

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Year:  2010        PMID: 20681719      PMCID: PMC2931826          DOI: 10.1021/ja103082y

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  45 in total

1.  Conformational stability of collagen relies on a stereoelectronic effect.

Authors:  L E Bretscher; C L Jenkins; K M Taylor; M L DeRider; R T Raines
Journal:  J Am Chem Soc       Date:  2001-01-31       Impact factor: 15.419

2.  Azidoproline containing helices: stabilization of the polyproline II structure by a functionalizable group.

Authors:  Michael Kümin; Louis-Sebastian Sonntag; Helma Wennemers
Journal:  J Am Chem Soc       Date:  2007-01-24       Impact factor: 15.419

3.  Stereoelectronic effects on polyproline conformation.

Authors:  Jia-Cherng Horng; Ronald T Raines
Journal:  Protein Sci       Date:  2006-01       Impact factor: 6.725

4.  Variations in the turn-forming characteristics of N-acyl proline units.

Authors:  G B Liang; C J Rito; S H Gellman
Journal:  Biopolymers       Date:  1992-03       Impact factor: 2.505

Review 5.  Synthesis and biological applications of collagen-model triple-helical peptides.

Authors:  Gregg B Fields
Journal:  Org Biomol Chem       Date:  2010-01-20       Impact factor: 3.876

6.  Catalysis with phosphine-containing amino acids in various "turn" motifs.

Authors:  Anton Agarkov; Scott J Greenfield; Takahiro Ohishi; Scott E Collibee; Scott R Gilbertson
Journal:  J Org Chem       Date:  2004-11-12       Impact factor: 4.354

7.  Collagen stability: insights from NMR spectroscopic and hybrid density functional computational investigations of the effect of electronegative substituents on prolyl ring conformations.

Authors:  Michele L DeRider; Steven J Wilkens; Michael J Waddell; Lynn E Bretscher; Frank Weinhold; Ronald T Raines; John L Markley
Journal:  J Am Chem Soc       Date:  2002-03-20       Impact factor: 15.419

8.  The "azido gauche effect"-implications for the conformation of azidoprolines.

Authors:  Louis-Sebastian Sonntag; Sabine Schweizer; Christian Ochsenfeld; Helma Wennemers
Journal:  J Am Chem Soc       Date:  2006-11-15       Impact factor: 15.419

9.  Stereoelectronic effects on the transition barrier of polyproline conformational interconversion.

Authors:  Yi-Chun Chiang; Yu-Ju Lin; Jia-Cherng Horng
Journal:  Protein Sci       Date:  2009-09       Impact factor: 6.725

Review 10.  Collagen structure and stability.

Authors:  Matthew D Shoulders; Ronald T Raines
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

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  15 in total

1.  A conserved interaction with the chromophore of fluorescent proteins.

Authors:  Amit Choudhary; Kimberli J Kamer; Ronald T Raines
Journal:  Protein Sci       Date:  2011-12-21       Impact factor: 6.725

2.  n→π* Interactions Modulate the Properties of Cysteine Residues and Disulfide Bonds in Proteins.

Authors:  Henry R Kilgore; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2018-12-06       Impact factor: 15.419

3.  n→π* Interactions Are Competitive with Hydrogen Bonds.

Authors:  Robert W Newberry; Samuel J Orke; Ronald T Raines
Journal:  Org Lett       Date:  2016-07-13       Impact factor: 6.005

4.  n→π* Interactions Modulate the Disulfide Reduction Potential of Epidithiodiketopiperazines.

Authors:  Henry R Kilgore; Chase R Olsson; Kyan A D'Angelo; Mohammad Movassaghi; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2020-08-21       Impact factor: 15.419

5.  Synthesis of 5-fluoro- and 5-hydroxymethanoprolines via lithiation of N-BOC-methanopyrrolidines. Constrained Cγ-exo and Cγ-endo Flp and Hyp conformer mimics.

Authors:  Grant R Krow; Matthew D Shoulders; Ramakrishna Edupuganti; Deepa Gandla; Fang Yu; Philip E Sonnet; Matthew Sender; Amit Choudhary; Charles DeBrosse; Charles W Ross; Patrick Carroll; Ronald T Raines
Journal:  J Org Chem       Date:  2012-05-25       Impact factor: 4.354

6.  4S-Hydroxylation of Insulin at ProB28 Accelerates Hexamer Dissociation and Delays Fibrillation.

Authors:  Seth A Lieblich; Katharine Y Fang; Jackson K B Cahn; Jeffrey Rawson; Jeanne LeBon; H Teresa Ku; David A Tirrell
Journal:  J Am Chem Soc       Date:  2017-06-20       Impact factor: 15.419

7.  Thioamides in the collagen triple helix.

Authors:  Robert W Newberry; Brett VanVeller; Ronald T Raines
Journal:  Chem Commun (Camb)       Date:  2015-06-14       Impact factor: 6.222

8.  Interplay of hydrogen bonds and n→π* interactions in proteins.

Authors:  Gail J Bartlett; Robert W Newberry; Brett VanVeller; Ronald T Raines; Derek N Woolfson
Journal:  J Am Chem Soc       Date:  2013-12-03       Impact factor: 15.419

9.  4R- and 4S-iodophenyl hydroxyproline, 4R-pentynoyl hydroxyproline, and S-propargyl-4-thiolphenylalanine: conformationally biased and tunable amino acids for bioorthogonal reactions.

Authors:  Christina R Forbes; Anil K Pandey; Himal K Ganguly; Glenn P A Yap; Neal J Zondlo
Journal:  Org Biomol Chem       Date:  2016-01-25       Impact factor: 3.876

10.  The diketopiperazine-fused tetrahydro-β-carboline scaffold as a model peptidomimetic with an unusual α-turn secondary structure.

Authors:  Francesco Airaghi; Andrea Fiorati; Giordano Lesma; Manuele Musolino; Alessandro Sacchetti; Alessandra Silvani
Journal:  Beilstein J Org Chem       Date:  2013-01-22       Impact factor: 2.883

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